KEGG   Polynucleobacter paludilacus: AOC06_04755
Entry
AOC06_04755       CDS       T08333                                 
Name
(GenBank) type IIA DNA topoisomerase subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
ppal  Polynucleobacter paludilacus
Brite
KEGG Orthology (KO) [BR:ppal00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppal03032]
    AOC06_04755
   03036 Chromosome and associated proteins [BR:ppal03036]
    AOC06_04755
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ppal02048]
    AOC06_04755
Enzymes [BR:ppal01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     AOC06_04755
DNA replication proteins [BR:ppal03032]
 Prokaryotic type
  DNA Topoisomerases
   AOC06_04755
Chromosome and associated proteins [BR:ppal03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    AOC06_04755
Prokaryotic defense system [BR:ppal02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    AOC06_04755
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim TOPRIM_C HATPase_c_3
Other DBs
NCBI-ProteinID: QWD86301
LinkDB
Position
complement(891035..893023)
AA seq 662 aa
MATRKTSEYSESSIQVLKGLEPVRQRPGMYTRTDNPLHIIQEVLDNASDEALGGFGKHII
VTMHTDGSVSVEDDGRGIPVGMHPTEKLPVVEIVFTQLHAGGKFEKGSGGAYAFSGGLHG
VGVSVTNALSKRLEVTVWRDGQVSTLTFADGKVIEKLKSKASSKEDKSHGTRVRAWPDAK
YFDSAAIPMPELIRLLRSKAVLLPGVKVTLIQEKSGDSQTWQYAQGLRGYLNEAIAQAGH
GAEVIPPFEGEQYATGNSDEDGFAEGEGAAWVVAWTEDGAPVRESYVNLIPTPAGGTHES
GLREGLFNAVKGFIEMHALQPKGVKLMPEDVFARASFILSAKVLDPQFQGQIKERLNSRD
AVRLVSAYSKSALELWLNQHVDYGRKLADLVIKQAQARTRAGQKVEKKKSSGVAVLPGKL
TDCESQDITMNEIFLVEGDSAGGSAKMGRNKEYQAILPLRGKVLNTWEAERDRLFANNEV
HDIAVAIGVDPHGPNDDIDLSNLRYGKVCILSDADVDGAHIQVLLLTLFYKHFPKLIDLG
HVYISRPPLFRVDAPARGKKPAQKIYALDANELQAIEDKLRKDGVRESAWQISRFKGLGE
MSAEQLWDTTLNPDTRRLLPVTLGEWTQDETIKTMDMLMGKSESGARRDWLEERGNEVEA
DI
NT seq 1989 nt   +upstreamnt  +downstreamnt
atggctacacgtaaaacctccgaatacagcgaatcatcgattcaggtcctgaaaggcctt
gaacccgtccggcaacggcccggtatgtacacccgtaccgataatcctttgcacatcatt
caagaggttctggataacgcatccgatgaggcgctaggcggatttggcaaacacatcatt
gtgaccatgcacactgatggcagcgtgagtgtcgaagacgatggtcgaggtattcctgtg
ggaatgcatcctacggaaaagcttcccgtagtagaaattgtattcacccaattgcatgct
ggcggtaagtttgaaaaaggcagcggtggcgcttacgctttctcaggtggtctgcatggg
gttggcgtctctgttactaacgcactttcaaaacgattggaagtgacggtttggcgtgat
gggcaagtttccaccttgacttttgctgacggcaaggtgattgagaaactcaaatctaaa
gcatccagcaaagaagataaatcgcatggcactcgcgtgcgggcttggcctgatgcaaag
tactttgatagtgcagcaattccaatgccagagttgattcgtttactcagatctaaggcc
gtattgctgcctggggtcaaagtcactctcattcaagaaaaatcgggcgacagtcaaact
tggcaatatgctcagggcttacgcggctatctcaatgaagcaatcgcccaagcaggtcat
ggtgctgaggtcattcctccatttgaaggtgagcaatatgccactggcaatagtgatgaa
gatggtttcgctgaaggtgagggcgctgcttgggtagtcgcttggactgaagatggcgca
cccgtgcgtgagagttacgtcaatctgattcctactccagcaggaggaactcatgagagc
ggtttacgcgaaggcctcttcaatgctgtcaaaggctttatcgagatgcatgccctacaa
cccaaaggcgtgaaactgatgcctgaggatgtctttgcgagagcttcctttattctgtct
gccaaagtgctagaccctcagtttcaggggcaaattaaagagcgcctcaactcacgcgac
gccgttcgattggtctcggcctattccaaatccgctctagagctttggttaaaccagcat
gtcgactatggtcgtaagcttgctgatctcgtgattaaacaggcgcaagctagaacgcgc
gctggtcaaaaagttgaaaagaagaaatcttctggtgtagcagtgctgccgggcaagtta
accgattgcgagagtcaagatatcactatgaatgaaattttcctagtcgagggagattca
gcaggtggttcagcgaagatgggtcgcaataaggaatatcaggcaatcttgcctctacgc
ggtaaggttttgaacacctgggaggcagagcgcgatcgtctctttgcgaataacgaagta
cacgatatcgcggtagcgatcggcgttgatcctcatggccccaatgacgatatcgattta
tcgaatctacgctatggcaaggtatgcatactttctgatgctgacgttgatggagcgcat
attcaagtattgctgctcactttgttctataagcactttcccaaactgattgatttgggt
catgtctatatttcaaggccacctttgtttagagtcgatgctccagcccgcggcaagaag
cctgcccaaaaaatctatgccctcgatgcgaatgagcttcaggccattgaagacaaatta
cgcaaggacggcgttcgagagagcgcatggcagatctctcgctttaaaggtttgggagaa
atgagtgcagagcaattgtgggataccactttaaaccccgacactcgacgtttgctgcct
gtaacactaggtgagtggacccaggatgaaacgattaaaacgatggatatgttgatgggt
aaatccgaatccggcgcgcggcgcgattggttggaagagcgcggtaatgaagttgaggca
gatatctaa

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