Polynucleobacter paludilacus: AOC06_04775
Help
Entry
AOC06_04775 CDS
T08333
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
ppal
Polynucleobacter paludilacus
Pathway
ppal00730
Thiamine metabolism
ppal01100
Metabolic pathways
ppal01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
ppal00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
AOC06_04775 (thiC)
Enzymes [BR:
ppal01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
AOC06_04775 (thiC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
QWD87904
LinkDB
All DBs
Position
895674..897536
Genome browser
AA seq
620 aa
AA seq
DB search
MPSLKSLERDFGQKFAYPASSKTYLTGSRPDIKAPVRMIEQFPTRVGEQMVSNPPIPVYD
TSGPYSDPEIVINLEKGLPALRETWIAERNDTELLAGPSSDYGVARSKDADTQHLRFAHI
RAPRVAKAGQNVSQMYYARKGIVTPEMEYVALRESMGLEQLRKNPEYTQLLKQHPGKSYG
ANLPEIITGEFVRQEIAAGRAIIPANINHPELEPMIIGRNFRVKINGNLGNSAVTSSINE
EVEKMVWSIRWGADTIMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALDKTGGIAEDLT
WEMFRDTLVEQAEQGVDYFTIHAGVLLRYVPLTADRITGIVSRGGSIMAKWCLAHHKENF
LYTKFDEICEIMKAYDVSFSLGDGLRPGCIADSNDAAQFGELHTLGELTAKAWQHDVQVM
IEGPGHVPMQRIEENMTEELKHCLEAPFYTLGPLITDIAPGYDHITSGIGAAQIGWYGTA
MLCYVTPKEHLGLPDKEDVREGIITYKIAAHGADLAKGLPGAQIRDNALSKARFEFRWED
QFNLGLDPERAREYHDATLPAEGAKIAHFCSMCGPKFCSMKITQEVRDYAANLKAEGIDP
NKGMEEKSIEFRKRGSEIYQ
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
attccaagcctaaaaagtcttgagcgcgactttggtcaaaagtttgcctatccagcatca
agcaaaacctatttaacaggatcacggcccgatattaaggcgccggttcgcatgattgag
cagtttcccactcgcgttggggagcaaatggtatccaaccctcctattcctgtgtatgac
acctcaggcccttatagcgatcctgagattgtcatcaatttagaaaaaggtttgccagca
ttacgtgagacttggattgctgagcgcaatgacaccgaactactcgcaggcccctcatct
gactacggcgttgctcgctcaaaagatgccgatacacaacatttacgctttgctcatatt
cgtgcaccccgcgttgcaaaagcgggtcaaaatgtgagccaaatgtattatgctcgcaag
ggtattgttacccctgagatggaatatgttgctctgcgtgagtccatgggtttagagcaa
ctgcgcaagaatccagagtacacccaattattaaagcaacatcctggtaagagttacggc
gccaatcttccagaaattattactggggaatttgtccgtcaagaaattgctgcgggtcgc
gccattattcccgccaacattaatcaccctgaattagagccgatgattattggccgcaat
ttccgtgtcaagatcaatggcaatttgggtaactctgctgtgacctcttctatcaacgag
gaagtcgagaaaatggtttggtcaatccgttggggtgctgacaccatcatggatttatcg
actggaaaacatattcatgaaacccgtgagtggattattcgcaactctcctgtgccaatt
ggtacagtgcccatttaccaagcgcttgataagacggggggtatcgccgaggatctcact
tgggaaatgttccgcgatacattggttgagcaagctgaacaaggtgtcgactatttcacg
attcatgctggcgtattactgcgttatgtcccactgactgccgaccgcattaccggcatt
gtgtcgcgtggtggttcgatcatggccaagtggtgcctagcccaccataaagagaacttc
ctctacaccaagttcgatgagatctgcgagattatgaaagcgtacgacgtttcattcagt
cttggcgatggtttgcgccctggctgtattgctgactctaatgatgccgcccaatttggt
gaactgcatactctaggtgaactcactgctaaagcctggcagcacgatgtccaagtgatg
attgagggtcctggccacgttccgatgcagcgcattgaagagaatatgaccgaagaattg
aagcattgtttagaggcccccttctatacactggggcccttgattaccgatattgcccct
ggctatgatcacatcaccagcggtattggcgcagcccaaatcggttggtacggcactgca
atgctctgctatgtcacaccaaaagaacacttaggcttgccagacaaagaagatgtccgc
gaagggatcatcacctacaagattgccgctcatggcgccgatcttgccaagggtttgcct
ggcgctcagattcgggataacgccctatctaaagcccgctttgagttccgctgggaagat
caatttaatctaggtctggatccggaacgtgcacgtgaatatcacgacgctactttgcca
gccgaaggagccaaaattgcccacttctgttctatgtgtggacctaaattctgctccatg
aagatcacccaagaagtgcgtgactatgcggcaaacttgaaagctgaaggcattgatccc
aataaaggcatggaggagaaatccatcgagttccgcaaacgcggtagcgagatctatcaa
taa
DBGET
integrated database retrieval system
