Polynucleobacter paludilacus: AOC06_04825
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Entry
AOC06_04825 CDS
T08333
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ppal
Polynucleobacter paludilacus
Pathway
ppal00061
Fatty acid biosynthesis
ppal00071
Fatty acid degradation
ppal01100
Metabolic pathways
ppal01212
Fatty acid metabolism
ppal02024
Quorum sensing
ppal04146
Peroxisome
Module
ppal_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ppal00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
AOC06_04825
00071 Fatty acid degradation
AOC06_04825
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
AOC06_04825
09145 Cellular community - prokaryotes
02024 Quorum sensing
AOC06_04825
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ppal01004
]
AOC06_04825
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppal04147
]
AOC06_04825
Enzymes [BR:
ppal01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
AOC06_04825
Lipid biosynthesis proteins [BR:
ppal01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
AOC06_04825
Exosome [BR:
ppal04147
]
Exosomal proteins
Exosomal proteins of breast milk
AOC06_04825
Exosomal proteins of breast cancer cells
AOC06_04825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
LpxD
Motif
Other DBs
NCBI-ProteinID:
QWD86311
LinkDB
All DBs
Position
complement(904092..905792)
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AA seq
566 aa
AA seq
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MNTAQPWLAQYPAGVPAEISLPEHTSVVDLLDKSFLQYPERTAMESMGQKFSYRTLDQLS
TQFASYLQTLNLPAGSRVAIMFPNVPQYLIAMLGTLRAGCVVVNVNPLYTPRELEHQLKD
SQASVLVLSENFAHIYQQIVEQTPLKQVVVSSLGNLLGPKGILVNFVARYIKKIVPVWSF
PHSRFIDALHLGKQNPFQQLPIDPNSIAFLQYTGGTTGISKGATLLHRNILANVLQTEAW
IEPALHGKQAKQLVFLCALPLTHIFALTACALLGLRKGGLLLLVSNPRDITGLIKLLDKH
PDVNIFPGVNTLFHALVHRPEFKKLNLSNLLVTIGGGMAMQKKTADHWQAITGNPIAQGY
GLSETSPVVCVNTPLIKQFTGNIGLPLPSTDVIILGEDGERVPFGEVGEICIRGPQVMAG
YWNQPDENIKAFTSDGYFKSGDIGFMDSDGYITIVDRIKDMIVVGGFKVFPNEVEEVLAL
MPGIHECAVVGVEHRKLGEIVKAYIVKDKHELTSADVLQYCKEQMTSYKRPRKIVFVNEL
PKSNVGKILRREVRKLEDPSNQDRHA
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgaatacggctcaaccgtggctggcacagtatccagcaggggttcctgccgagatcagt
cttccagagcatacttccgttgttgatttgctggacaaatcctttttgcaatatccagag
cggactgccatggaatccatgggccaaaaatttagctatcgaactctagatcagctatcc
acgcaattcgcctcttatttgcaaactcttaatctgccagctggctcaagggtggccatt
atgtttcccaatgtgccgcaatatctgattgcgatgttgggtacattgcgcgcaggctgt
gttgtagtcaatgttaaccccctctacacaccaagagaacttgagcatcaattaaaagat
agccaagcatccgttctcgttctctccgaaaactttgcccatatctatcagcaaatagtg
gagcaaacccccttgaagcaagtcgttgtgagtagtcttggaaatttattgggccccaaa
ggcattctggtcaactttgttgcccgttatattaaaaagatcgtacctgtgtggagcttt
cctcatagtcgctttattgatgcccttcatctcggtaagcaaaatccctttcaacaattg
ccgatcgatcctaactcgattgccttccttcagtacactggcggaactaccggcatatcc
aagggcgctactttattgcaccgaaatatccttgcaaatgttttgcaaactgaagcttgg
attgagcccgcacttcatggcaagcaagcaaaacaactcgtatttttatgtgctttaccc
ttaacccatatctttgccctcactgcctgtgccttattgggcttacgcaagggtggctta
ctactcttggtttctaaccctagggacatcacagggctcatcaaattgctagataagcat
ccggatgtgaatatcttcccaggcgtcaatacactttttcatgcactggtacatcgccct
gaatttaaaaaactcaatttgtccaacctactggtcacgattggcggtggaatggcaatg
caaaagaaaacggcggatcattggcaggcaattacaggcaatccgattgcgcaaggctat
ggactatctgaaacctctccagtggtctgtgtcaatacgccattgattaagcaatttaca
ggaaatattggtttaccgctaccgagcacggacgtaattatccttggggaggacggtgaa
agagttccatttggtgaagtaggagagatttgcattaggggccctcaagtcatggcggga
tattggaatcagcctgatgagaacataaaagcatttacctctgatggttactttaagtca
ggagatattggctttatggatagtgatggctacatcacgattgttgatcgcattaaagac
atgattgtggttggtggcttcaaggtttttccgaatgaggttgaagaagtgctggccttg
atgcccggcattcatgaatgtgctgtggttggagtggagcatcgtaagctcggagagatt
gtcaaggcctatattgtgaaagacaagcatgagcttactagtgcagatgttttgcagtat
tgcaaagaacagatgaccagctataagcgccctagaaagattgtgtttgtaaatgagtta
cccaaatctaacgtgggcaaaatcttacgtcgtgaagtgagaaagttagaggatccctca
aatcaagatcgtcatgcttaa
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