Polynucleobacter paludilacus: AOC06_05015
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Entry
AOC06_05015 CDS
T08333
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
ppal
Polynucleobacter paludilacus
Pathway
ppal00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppal00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AOC06_05015
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ppal01007
]
AOC06_05015
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppal03016
]
AOC06_05015
Enzymes [BR:
ppal01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
AOC06_05015
Amino acid related enzymes [BR:
ppal01007
]
Aminoacyl-tRNA synthetase
Class II (U)
AOC06_05015
Transfer RNA biogenesis [BR:
ppal03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
AOC06_05015
Prokaryotic type
AOC06_05015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
VapB_antitoxin
Motif
Other DBs
NCBI-ProteinID:
QWD86344
LinkDB
All DBs
Position
complement(940482..942938)
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AA seq
818 aa
AA seq
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MQFSESWLRQYVNPELDSAALGHAMTMAGLEVEEQHSVAPSFTQIVVAEILSAEQHPDAD
RLRVCKVNAGTGQELQIVCGAPNARAGIKIPCALVGAQLPPAEAGGKPFQIKVGKLRGVE
SQGMLCSGRELGLGEDHEGILELPSDAPVGKDIRQYLDLDDQIFIIKLTPNKADCLSLIG
MAREVSAITGAALKKPEWKAVPVSIKDQRKVIVENTELCGRFAGRIIQGVNAKAKTPDWI
VQRLARAGQRSISALVDLSNYVMLEMGQPTHVFDLDKVTGDIIVRWAKTGEQLALLNGQT
VQLTDVNNSKALPIGIVADQNGPLALAGIMGGNHCAVTDDTINIFVEAAYWQPNAIQGRA
RRFNFSTDAAHRFERGVDPQATVDCLEYLSNLIIEVCGGQAGPIDDQVLATPERKPVKMR
LERAAKVIGIPLTTQIVSDVFKSLNFDYKLEAGDVYVVTPPSYRFDIEIEEDLIEEVARM
YGFENIPDHPPVASLKMSAKPEAKRAVHLLRQRFALQGYQETVNFGFIDADSEKRLAGAS
DAALIKVLNPIASQYGVMRSNLWGGLLNNLKANLNRGATRVRLFETGRVFKRNASFTEQS
GEVAGFDQPQRIGGLAYGSFVPEQWANANRLVDFFDVKGDLERVFDPLHLLTGAAQHPAL
HPGRSAQVMLHAAEGPVILGWIGELHPGLQQAYELPQAPVLFELDLEPLRNIGLPQPEEL
SKFPAVQRDLAVVVKQNIAAQALLDAMQASKQQFVRSIQLFDEFRPKAGSASMAEDEKSL
AFRVTLLNPEDTLQDVQIEAAMSGLLVALEKKCAARLR
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgcaattttctgaatcctggctaagacagtacgttaatcctgagcttgatagcgcagcc
cttggccatgccatgacgatggcgggtttggaggttgaagagcagcactcggtagcgcct
tcatttacacagatcgttgttgctgaaattctgtctgctgaacaacatccggatgccgat
cgtttaagagtctgcaaagtgaatgccggtactggccaagaattacaaattgtgtgtggt
gcacccaatgcaagagccggaatcaaaattccttgcgccttagttggagcgcaattacct
cctgccgaagccgggggaaagccttttcagattaaggtgggtaagttacgtggcgtagaa
agccagggcatgttgtgttctggaagagagcttggcctaggcgaggatcatgagggtatt
ttggagctcccgtctgatgctccagtgggtaaagatattcgacagtacctggatttagac
gaccagatttttatcatcaaactcacgcccaataaagcagattgcttgtccttaataggc
atggcaagagaagtttctgcaattaccggagcggcactcaaaaagcctgagtggaaagcc
gtaccggtttccattaaagaccaacgcaaagtcatcgttgagaacacagaactttgtggc
cgctttgctggtcgtattattcaaggtgtcaatgcaaaagccaaaacgcccgattggatt
gtgcagcgcctagcccgagcaggacaaagaagtatctctgccttggtagatctctctaac
tatgtcatgctcgaaatgggtcagcccacccatgtatttgatttagataaagttactggg
gacatcatcgtgcgctgggccaaaacgggcgaacagttagcactcctcaatggtcagaca
gttcaactgactgacgtcaataactccaaagcgctgcctattggtattgttgccgatcaa
aatggcccgcttgcgttggctgggatcatgggtggcaatcattgcgccgtgactgatgac
accatcaatatttttgtagaagcagcctactggcagcctaacgccattcagggtcgtgca
cgtcgcttcaactttagtaccgacgctgcccaccgttttgagcgtggagtggatccacaa
gctaccgttgattgcctcgaatatctatctaacttgattattgaagtgtgcggcggacaa
gctgggccaattgatgatcaagtcttagccactccagagcgcaagcccgtcaagatgcgt
cttgagagagctgccaaggtcatcggcatccccttaacaactcaaattgtgagtgatgta
tttaagagtttgaattttgattacaagctcgaggctggcgatgtctatgttgtgacacca
ccgagctatcgctttgatattgagatcgaagaagacttaatcgaagaagtagcgcgcatg
tatggttttgaaaatatcccagaccatccaccagtagccagcctcaaaatgagcgctaag
cctgaagcaaagcgggcagtgcatttattacggcagcgctttgctcttcagggctatcaa
gagacagtgaattttggtttcattgatgctgatagcgaaaaacgcttagcaggtgcaagc
gatgccgctctcattaaagtgcttaatcccatcgcaagccagtatggtgtgatgcgcagc
aatttatggggcggcttactaaataatctcaaagccaatctcaaccgcggcgcaacccga
gttcgcctgtttgaaacgggtagggtgtttaagcggaatgccagcttcactgagcagtct
ggcgaagtggctggatttgatcagccacaacgcattggcggtctagcctatggcagtttt
gttcctgaacagtgggccaatgcaaatcgcttagtggatttcttcgacgtgaagggcgat
ctagagcgggtttttgatcccttgcacctgcttacaggagctgctcagcatcctgcattg
caccccggacgttctgcgcaagtcatgttgcacgctgctgagggtccagtcattctgggt
tggatcggcgaattacatcctggcttacaacaggcttatgagttgccacaggccccagta
ttattcgagttggacttagagcccttacgtaatattggtcttccgcagcctgaagagctc
agtaaatttcctgcagtccaacgtgacttggctgtggtggtgaagcaaaatattgcagcc
caggcgctgctggatgcaatgcaagctagcaagcaacagtttgttcgatcgattcaattg
tttgatgagttccgacccaaggcaggatcggcatcaatggcagaagacgaaaagagtttg
gcattccgcgttacattactcaatcctgaggacacattacaggatgtacaaattgaggct
gcaatgagcggtttactagtcgccttagaaaaaaaatgtgccgcgcgcttgcgctag
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