Polynucleobacter paludilacus: AOC06_05385
Help
Entry
AOC06_05385 CDS
T08333
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
ppal
Polynucleobacter paludilacus
Pathway
ppal00220
Arginine biosynthesis
ppal00240
Pyrimidine metabolism
ppal00250
Alanine, aspartate and glutamate metabolism
ppal01100
Metabolic pathways
ppal01110
Biosynthesis of secondary metabolites
ppal01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
ppal00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
AOC06_05385 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
AOC06_05385 (carB)
00220 Arginine biosynthesis
AOC06_05385 (carB)
Enzymes [BR:
ppal01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
AOC06_05385 (carB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATP-grasp_3
ATPgrasp_Ter
ATP-grasp_4
ATP-grasp_5
RimK
CoA_binding_2
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QWD86405
LinkDB
All DBs
Position
complement(1010641..1013904)
Genome browser
AA seq
1087 aa
AA seq
DB search
MPKRSDIKSILIIGAGPIVIGQACEFDYSGAQACKALRDEGYKVILVNSNPATIMTDPEM
ADVTYIEPITWEVVERIIATEKPDAILPTMGGQTALNCALDLHRHGVLEKYGCELIGASP
EAIDKAEDRQKFKEAMTKIGLGSAKSGIAHSLDEAHEVQQRIQQETGSAGFPVVIRPSFT
MGGSGGGIAYNREEFEEICKRGLDLSPTHELLIEESLLGWKEFEMEVVRDRADNCIIVCS
IENLDPMGVHTGDSITVAPAQTLTDKEYQIMRNASIAVLREIGVDTGGSNVQFSINPADG
RMIVIEMNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGATPASFEPSID
YVVTKIPRFAFEKFPQADSRLTTQMKSVGEVMAIGRTFQESFQKALRGLEVGVDGLDEVS
TDLDDIIQEIGEPGPDRIWYLADAFRMGMGLDEIYAETKVDPWFLEQIEELITMETELKQ
RKIDSLSAAELRFVKQKGFSDRRLAKLLGVDASSIRSARHRLKVTPVYKRVDTCAAEFAT
NTAYMYSTYEAEHGECESNPTNRDKIMVLGGGPNRIGQGIEFDYCCVHAALAMRDDGFET
IMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVAKEKPKGVIVQYGGQTPLKLALDLEK
NGVPIIGTSPDMIDAAEDRERFQKLLQDLGLRQPPNRTARAEDEALKLAEEIGYPLVVRP
SYVLGGRAMEIVHDGRDLERYMREAVKVSNDSPVLLDRFLNDAIECDVDCISDGKRVFIG
GVMEHIEQAGVHSGDSACSLPPYSLSEETVSEIKRQTAAMAKGLNVVGLMNVQFAIQNVN
GLDVIYVLEVNPRASRTVPFVSKATGLQLAKIAARCMVGQSLDQQGIEAEVKPPYFSVKE
AVFPFNKFPGIDPILGPEMRSTGEVMGVGKTFGEALFKSQLGAGTKLPKTGTVALTVKDS
DKAKAVEVAKLLHQLGFPMVATKGTAAAIEAAGLPVRVVNKVKDGRPHIVDLIKNGEISL
VFTTVDETRAAIADSRSIRTSAQAQGITYYTTISAARAVMDGLLASQHGGNESLEVYSLQ
NLHLLLN
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagcgtagcgacattaagagcattctgattattggtgctggcccgattgtgatt
ggtcaagcttgtgagtttgactattccggagcgcaggcttgtaaggcattgcgtgatgag
ggctacaaagtgattttggtcaatagcaaccctgcgaccatcatgaccgaccccgagatg
gcggatgtaacctacatcgagccgattacttgggaagtggtagagcgcatcatcgctacc
gagaagccagatgcgattctcccaacgatgggtggtcaaaccgcattgaactgtgcactg
gatttacatcgccacggtgtattagaaaaatacggctgtgaattgattggcgcttcacct
gaggcaattgataaggcagaagatcgtcaaaagttcaaagaggcgatgaccaaaattggt
ctaggctctgccaagtctgggattgcccattcgctagatgaagctcatgaagtacagcaa
cgcattcaacaagaaactggtagcgccggtttcccggtagtgatccgtccatcattcacc
atgggtggatcaggcggtggtattgcttataaccgcgaagagtttgaagaaatctgcaaa
cgcggtttagatctctcaccgacccacgaactgctgattgaagagtcgctcttgggttgg
aaagaatttgagatggaagtggtgcgagatcgtgctgataactgcatcattgtttgctcg
attgaaaacttagatccgatgggcgttcataccggtgactcgattacggtcgcacctgct
caaaccttgaccgataaagaatatcaaatcatgcgtaatgcatcgattgcggtcttgcgc
gagatcggcgtagatactggcggttcaaacgtgcagttctcgattaacccagctgatggg
cgcatgattgtgattgagatgaacccacgggtatctcgctcatctgcattggcttctaaa
gcgactggtttcccaatcgcgaagattgctgccaagttggcagtcggatacaccttagat
gaactcaagaatgacatcacaggtggtgcaacacctgcatccttcgagccgtcaatcgac
tatgtcgtgaccaagattcctcgctttgcttttgagaagttcccgcaagcagattcacgt
ttaactactcagatgaaatccgttggtgaagtgatggcgattggccgcaccttccaagag
tccttccaaaaagccctacgtggtcttgaggtgggggtagatggtttagatgaagtgtct
actgatttagacgacatcattcaagaaattggtgagcctggccctgatcgtatttggtat
ttggctgatgccttccggatgggaatgggtttagatgagatctacgctgaaactaaagtc
gatccttggttcttagagcaaattgaagagctcattaccatggagactgagcttaagcag
cgcaagatcgatagcctgtcagcagcagaactgcgttttgtaaagcagaagggattctcg
gatcgcagactcgctaaattactcggcgtcgatgcatcatccattcgctctgcacgtcat
cgtctcaaagtcacccctgtttataagcgggtagatacgtgcgcagcagaattcgctact
aatactgcttatatgtattccacctatgaagctgagcatggtgagtgcgagtcaaatcca
acgaatcgtgacaagatcatggtgctcggtggtggacccaatcgcatcggtcagggtatt
gagtttgactactgctgcgtccatgctgcgctggccatgcgtgacgatggttttgaaacc
atcatggtgaactgtaatccagaaactgtttctactgactatgacacttctgatcgtctc
tactttgagccattgacgcttgaagatgttttagagattgtcgctaaagagaagcctaag
ggcgtcatcgtccagtatggtggtcaaacccccttgaagttggcattggatcttgagaag
aatggtgtgcctattattggtacttcgcctgacatgattgatgcggctgaagatcgtgag
cgtttccagaaacttctgcaagatttgggcttacgtcaaccacctaaccgcaccgcacgc
gctgaagatgaggcactcaagctcgctgaagaaattggctatccattggtagttcgtcct
tcttatgttttgggtggtcgtgcaatggaaatcgtgcacgatggcagagatctcgaacgc
tatatgcgtgaagctgtcaaagtatctaatgattctcctgtgcttttagatcgcttcttg
aatgacgcgattgagtgtgatgtggattgcatcagcgacggtaagcgggtatttatcggc
ggagtgatggagcatattgagcaggctggagttcactctggtgactctgcatgttccttg
ccaccgtattctctctctgaggaaactgtaagtgagatcaagcgtcaaactgctgcgatg
gcaaaaggtttgaatgtagttggtctaatgaacgtccagtttgcgattcagaatgtcaat
ggtctggatgtgatttatgtgcttgaagttaatccccgcgcctcccggaccgttcctttt
gtctctaaagctactggcttgcagctggctaagattgctgcccgttgcatggtggggcaa
tcactcgaccagcagggtattgaggctgaagtgaagccaccgtatttctctgtcaaggaa
gccgttttcccattcaataaatttcctggcattgatccaatcttggggccagagatgcgc
tccacaggtgaggttatgggtgtcggtaaaacctttggtgaggcgctcttcaaatctcaa
ctgggtgctggaacgaagttgcctaagacgggcacggttgctctgactgtcaaggatagt
gacaaggcgaaggcagttgaagtcgctaagttattacatcaactgggcttcccaatggtt
gctaccaaaggcaccgcagcagcaattgaagcggctggattgcctgttcgagtagtgaat
aaagtaaaagatggtcgtccacatattgtggatttgattaagaacggtgaaatctccctg
gtatttactacagtggatgaaacccgggctgccattgcggattcacgttcgattcggacc
agtgctcaggcgcaagggattacctactacaccacgattagtgctgcgcgtgcggtgatg
gatggtttgcttgcatctcagcatggcggaaatgagtcgcttgaggtgtactctttacag
aatttacatctactgctgaattaa
DBGET
integrated database retrieval system
