Polynucleobacter paludilacus: AOC06_05400
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Entry
AOC06_05400 CDS
T08333
Name
(GenBank) transglycosylase SLT domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
ppal
Polynucleobacter paludilacus
Brite
KEGG Orthology (KO) [BR:
ppal00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppal01011
]
AOC06_05400
Enzymes [BR:
ppal01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
AOC06_05400
Peptidoglycan biosynthesis and degradation proteins [BR:
ppal01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
AOC06_05400
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
DUF1180
Motif
Other DBs
NCBI-ProteinID:
QWD87917
LinkDB
All DBs
Position
complement(1017237..1018583)
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AA seq
448 aa
AA seq
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MVAVLTGCATGDWSSDTPTKGGTKLSRATRVNLNKQNVSDLGAPSDNLWLRIRDGFQMEP
VDSPLIVDQTVWLASRPDYVQRSMKRSSPYLFYIVQEVNARNMPTELALLPFVESAFNPQ
AKSGAKAMGIWQFMPKTGKDFQLTQNVFRDERRDVLQSTDAALDYLNRLHTQFGSWELAL
AAYNWGSGNILKAQKRNLAAGLPTDYWSLTMPLETRAYVPKLMAYRALVLDPSAFGVTLP
ALENHPYFIAVDVNNDIDVALAAKLAEMSVDEFKTLNPSFNKPVILSAANQQILLPFGHA
EVYQENLKKYNKPLSTWTAVKVAQTQSAEATAQSLGVDLATLREINGIPKGMRIKAGSTV
IIPKTSRRPGDISVALAETASLSLEKPPPPPKKTKKGVAGKGAVKNAKDTKVASKGNSSS
NQAATQHKSASTGLAKSAKKDSIKTSSN
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggttgctgtgctgacaggttgcgctacgggtgattggtcctccgatactcccaccaaa
ggaggcaccaagctatcccgagcaacccgcgtcaatttaaataagcaaaacgtcagtgac
ttaggtgcaccttcagacaatctttggcttcgcattcgagatggttttcaaatggagcca
gtggattcaccactgattgttgatcaaacggtttggttagctagtcggccagattacgtg
caacgctcgatgaagcggtcctcaccttatttgttttatatcgttcaggaagtcaatgcg
cgcaatatgccgactgaactggccttactgccatttgtagagagtgcttttaatccgcaa
gccaagtcaggcgctaaggccatgggcatttggcaatttatgcctaagactggaaaagat
tttcagttaactcagaatgtcttccgtgacgaacgacgcgatgttttgcaatcaaccgat
gcagcgcttgattacttaaatcgtctgcatactcaatttggcagttgggagctggcattg
gcagcctacaactgggggtcgggcaatattctcaaggcccaaaaaagaaatctggctgct
ggcttgccaacagactattggagcttaacgatgcctctagagaccagagcctatgtgcct
aagttgatggcttatcgcgctctggttttagacccaagtgcatttggggtaacgttgcct
gccttggagaatcatccttactttattgcggtcgatgtcaataacgatattgatgttgcg
cttgctgccaagttggctgaaatgtctgtcgatgaatttaagacgctcaatccttctttt
aataagcccgtgattctcagtgcagccaatcagcaaatactcttgcctttcggacatgca
gaggtttatcaagagaacctcaaaaaatacaacaagcccctgtccacatggacggctgtg
aaggtggcgcaaacccaaagcgctgaggctactgcgcaaagtttgggcgtggatttggct
accttgcgggagatcaatggcattcccaaggggatgagaattaaggcggggtctaccgtc
atcattcctaagacaagccgtcgcccaggtgatatttcggttgctcttgcagagactgcc
agcctgagcttggagaagccaccgccaccccctaaaaagaccaagaaaggtgtagccggt
aagggagcagttaaaaacgccaaggatactaaagtggcgtctaagggtaattcctcctcc
aatcaggctgcaactcagcataaatccgcatcgacaggacttgcaaaatctgcgaaaaaa
gattccattaagacctctagcaactaa
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