Polynucleobacter paludilacus: AOC06_05425
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Entry
AOC06_05425 CDS
T08333
Name
(GenBank) efflux RND transporter permease subunit
KO
K07788
multidrug efflux pump
Organism
ppal
Polynucleobacter paludilacus
Pathway
ppal02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppal00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AOC06_05425
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppal02000
]
AOC06_05425
Transporters [BR:
ppal02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
AOC06_05425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
DUF5693
Motif
Other DBs
NCBI-ProteinID:
QWD86410
LinkDB
All DBs
Position
1022100..1025198
Genome browser
AA seq
1032 aa
AA seq
DB search
MTLSELCIRRPVMTVLLSVSTVIAGAVAYLHIPVAALPSFNSPVISVSASLPGASPENMA
ASVALPLEKEFSTIDGITVISSSNFLGTTSITLEFNNDRDIDKAAVDVQAALLRAQKRLP
IEMTSPPSYRKINPADTPVLVVRMSSPSMNLSDLNDYAENLLSPNLSTISGVAQVIVYGA
KRYAVRIRVHPDALANRNLTMDDVATAVNKANTNSPVGVLDGPRQSITIYANPQLVKPEE
FGNLIISQKNGLPIYLRDIAEVSQSYEDVKTWATSGGERSIAIAVLRQPNANTVDVVNSI
KALLPQLQKQMPSSIKLSLLNDRSISILESIHDVNFTLGLTVLLVVLVIFLFLKHISATI
IPTVSMPISLIGAFFLLYFMGYSLDNISLLGITLAVGLVVDDAIVVLENIMRYVEEGMDP
LKASLKGSKEVGFTIISISISLVAIFIPLFFMAGPIGLLFREFAVIVTLSILVSAVASLT
IVPLMCSRFLPKPGEHPKEFEINKKFDRIFDWMLKTYIHYLDMALRNRKKVLWGAISTFV
ITIVLFIYTPKGFFPEEDIGQIFATTEASEDISFTAMLALQDQAAAIVNSDPNVDSSISV
IGGGASSGTNTGRIFIILKPKGDRQKMAQVLEGLRAKFKELPGLQVYMRPTQNLQLGGKS
SKSRYQFTLQSVGFEGVNDWAEKLMQKMKADPLFRDVTSDSQLKGLDIQIEINREKAANA
GVTIADIRTALYSSFGERQVSTIYTPVNTYYAILETAAEDRQYETDLNKVYVRGRATDKL
VPLSSVASFVRKVGPTAVNHQGQIPAVTLSFNLAPDVFLGDATKKIESYCREIGLPPSII
TSYGGDAAVFKSNQSGQIILILAALGVIYIILGVLYESYIHPLTILAGLPSAAIGAILAL
RLFGFELTVIASIGILLLIGIVKKNAILMIDFALQAQRGQGMTPEKAIREACILRFRPIM
MTTFAALMGALPIALGLGAGAELRQPLGITVAGGLIFSQFVTLIITPVIYLYLDKYAGNG
PMEIPESVLEGT
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgacgttatccgaattatgtattcggcgtcccgtaatgacggtactgctctcagtatcg
accgtcatcgccggtgctgttgcctatctccatattcctgttgctgcgcttcctagcttt
aactctcccgttatctcggttagcgcatctctaccaggcgcatcaccagagaatatggca
gcctcggttgccctgcccttagaaaaagagttctcaacgattgatggcattacggtgatt
agctcaagcaactttctgggcacaaccagcatcactctcgaatttaataacgatcgagat
atcgacaaagccgcagtagacgttcaagctgcgctcttgagagctcaaaagcgtctgccg
attgagatgacatctccaccgtcttatcgaaaaattaatcctgctgacacacccgttctg
gtggtgcggatgagctcaccctccatgaatctctctgacctcaacgactacgcagagaat
ttactatcacccaatctttctactatcagcggtgttgcacaggtcattgtgtatggcgcc
aaacgttatgccgttcgcatccgcgtccatccagatgcattagcgaaccgcaacctgacg
atggatgacgtggctactgctgtgaataaagccaataccaatagtccggttggcgttcta
gacggccctcgtcagtccatcaccatttacgccaacccacaactggtcaagcctgaagaa
tttggcaacctcatcattagccaaaaaaatggcttgccaatttatctgcgtgatatcgca
gaagtcagccagagttatgaggacgtcaagacctgggcaacctctggcggcgaacgctcg
atcgcgattgctgtattacgtcagccaaatgccaatacggtcgatgttgtcaattcgatt
aaagccctgcttcctcaattgcaaaagcagatgcccagctcaatcaaattaagtctttta
aacgaccgctcaatatccatcttggaatcaattcatgatgtgaacttcacattgggtctg
acagtcctgctagtagtgctggtgattttcctgtttctaaaacatatctcggcgaccatc
atcccaacggttagcatgccgatctctttgataggcgccttcttcctgctctactttatg
ggttatagcctggataacatttcactactaggtattacgctagcagtaggcttggtggtc
gatgatgcgatcgtagtacttgaaaacatcatgcgctatgtcgaagaaggcatggatcca
ctcaaggcatccctcaagggcagtaaagaggtggggttcaccatcatctcgatctcgatt
tcattggttgctatttttatccccctcttcttcatggcgggtccaattggtttgctcttt
agggagtttgctgtaatcgtaaccctgtcgattttggtatcggccgttgcttccctgacg
atcgtccccctgatgtgtagccgcttcctgccaaaaccgggtgagcaccctaaagagttt
gaaattaataaaaagtttgatcgtatttttgattggatgctcaaaacctatatccactat
ctcgacatggctcttcgcaatcgcaagaaggtcctgtggggggctatctctacttttgtg
atcacgattgttttattcatctatacacctaaaggcttcttccccgaggaagatattggg
caaatctttgccactaccgaggcctcagaggatatctcctttaccgcaatgctggcactc
caggatcaggccgctgcaattgtgaattccgatcccaatgtagatagctccatctctgtg
attggtggtggcgctagctctggcacaaatacaggccgtatttttattattcttaaacca
aagggtgatcgacaaaaaatggcacaggtcttagagggcttgcgtgccaaattcaaagag
ctgcctggccttcaggtctatatgcgcccaactcaaaaccttcagctgggaggtaaaagt
agtaagagccgctatcaatttaccttgcaaagcgttggctttgaaggtgtcaatgactgg
gctgagaagctcatgcaaaagatgaaagctgaccccttatttcgtgatgtgaccagcgac
tctcaactgaagggcttggatattcagattgagatcaatcgagaaaaggctgctaatgct
ggtgtgacgattgctgatattcggactgcgctctactcttcatttggcgagcgtcaagtt
tcgactatctatacacctgtcaatacctactacgccatcttggaaacagccgctgaagac
cgtcaatacgaaaccgatttgaataaagtctatgttcgtggtcgcgctaccgacaaattg
gtgccactatcgagcgttgctagctttgtgcgcaaagttggacccactgcggttaaccat
caaggccagatccctgcggtcacactctcctttaacctggcgccagatgttttcttgggc
gatgccactaaaaagattgagtcttactgccgcgaaattggtttacccccttctatcatc
accagttacggcggcgatgctgcagtatttaagagcaaccaatcgggtcaaattattttg
attctggctgccttgggtgtgatttacatcatcctcggtgttctatacgagagctacatt
caccccttaaccattttggcaggattaccctcggcagcgattggtgccatcctagcgctg
cgtctctttggctttgagctcaccgtgatcgcatcgattggcatcttgctcttgattggt
attgtgaagaagaatgcgattttgatgatcgactttgctctgcaggcgcaacgaggtcaa
ggtatgactccagaaaaagcgattcgtgaagcctgtatcttgcgcttccgccctatcatg
atgacaacctttgctgccttgatgggcgccctaccgatcgctctgggtctgggtgcaggc
gctgaacttagacaaccgctaggtattacggttgcaggcggcttgatcttctctcaattt
gtgaccttgattattacgcccgtgatttatctctacctagataaatacgcaggcaacggg
cccatggaaattccggaatctgttttagagggaacctaa
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