Polynucleobacter paludilacus: AOC06_05430
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Entry
AOC06_05430 CDS
T08333
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ppal
Polynucleobacter paludilacus
Pathway
ppal03030
DNA replication
ppal03430
Mismatch repair
ppal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AOC06_05430 (dnaQ)
03430 Mismatch repair
AOC06_05430 (dnaQ)
03440 Homologous recombination
AOC06_05430 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppal03032
]
AOC06_05430 (dnaQ)
03400 DNA repair and recombination proteins [BR:
ppal03400
]
AOC06_05430 (dnaQ)
Enzymes [BR:
ppal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AOC06_05430 (dnaQ)
DNA replication proteins [BR:
ppal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AOC06_05430 (dnaQ)
DNA repair and recombination proteins [BR:
ppal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AOC06_05430 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QWD86411
LinkDB
All DBs
Position
1025200..1025895
Genome browser
AA seq
231 aa
AA seq
DB search
MRQVILDTETTGLNPATGDRIIEIGCVEMIGRRLTDRTFHYYINPERDIDAGAFAVHGLS
REFLSDKPVFGNIVDQLIEFVDGAEIVIHNAAFDLGFLDNEFALLKRPAFRSLAAKITDT
LLDARQMFPGKRNSLDALCERFSISNEHRTLHGALLDAQLLAEVYLAMTRGQEDLTIDLI
DYTVNHDDAGLPKALPTNLKLMAASADECKQHEQILADIAKASKKDPVWSA
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcaagttattctcgatactgaaacaacgggattaaaccctgccaccggtgatcgc
attattgaaatcggctgcgttgaaatgattggtcgacgtttaacggatcggacctttcat
tactacattaatccagagcgggatatcgatgcaggcgcttttgcagtccatggtctttca
agagagtttctctctgacaagccagtctttggcaatatcgttgatcaattgattgagttt
gttgatggcgctgagatcgtgattcataacgctgccttcgacttgggtttcttggataat
gaattcgccctactcaaaagaccagcatttagatctttagccgccaagatcactgacacc
ctgctcgatgcgcggcagatgtttccgggtaaacgaaattctctagatgccctttgtgag
cgtttttctatcagcaatgagcaccgcactctacacggtgctttattggatgcgcaatta
cttgccgaggtctatttagcgatgactcggggtcaagaggacctcaccattgatctgatt
gactacacagtcaatcacgatgatgctggcctacccaaggccttacctaccaatctcaaa
ctcatggctgccagtgcagatgaatgcaaacagcatgagcaaattttggcagacatcgcc
aaggctagcaaaaaagaccccgtctggagtgcttaa
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