Polynucleobacter paludilacus: AOC06_06010
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Entry
AOC06_06010 CDS
T08333
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ppal
Polynucleobacter paludilacus
Brite
KEGG Orthology (KO) [BR:
ppal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppal03016
]
AOC06_06010 (truB)
Enzymes [BR:
ppal01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AOC06_06010 (truB)
Transfer RNA biogenesis [BR:
ppal03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AOC06_06010 (truB)
Prokaryotic type
AOC06_06010 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PseudoU_synth_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
QWD86511
LinkDB
All DBs
Position
complement(1133994..1134905)
Genome browser
AA seq
303 aa
AA seq
DB search
MSVRIDGVVLLDKPAGMSSQGAVTAVKRAFNADKAGHTGTLDPMATGLLPICLGEATKYS
QDLLDADKTYIAKVQFGSRTDTGDAEGQIVETFDLPIFADQTAIQKALDQVLHQFTGAIK
QVPPMYSALKRDGKPLYEYARAGVELERTPREIIIHRIRWTDIQWPQATLEVSCSKGTYI
RVLAEEIGAALHCGAHLIGLRRTEVGHLNLEQSFTLESIQKGLQESSTYILPVDALLQTL
PHLTVDEQQAKRLEMGQRVPMSLPSIEALVRIYRATAAPHNFIGTADWRSGVLHPKRLIS
QAH
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgtcagttcgcatcgatggagttgtattgttagataagccagccggaatgagttctcaa
ggggctgttactgctgttaaacgcgctttcaatgccgataaagcgggccataccggtact
ttagatccaatggctacaggcctactcccgatttgtttgggtgaggctaccaagtattca
caagacttactcgacgccgataagacctatattgctaaagttcaatttggcagcagaacc
gatacgggtgatgctgaaggtcagatagtcgaaacctttgaccttccaatctttgcagat
cagacagcaattcagaaggcgctagatcaagttcttcaccaatttactggcgccattaaa
caagtgccaccaatgtattccgcactcaagcgagatggcaaacctttatatgaatatgcc
cgtgcaggtgtagagctcgagcgtaccccaagagagatcatcattcatcgcattcgatgg
accgatattcagtggccacaagccaccctggaagtaagctgcagtaagggcacttatatc
cgtgttctcgctgaagagattggtgcggcactgcactgcggtgcccatttaatcggtttg
cgccgaaccgaagtagggcacctcaatcttgagcaatcctttactttggagtcgatccaa
aaaggtctgcaagaaagctccacttatatcttgccagtcgacgccttattgcaaaccttg
ccccacttaactgtggatgagcaacaggctaaacgtttagagatggggcaaagagttcct
atgagcctgccttcgattgaagctttagtgcgtatttatcgtgcgactgcggctcctcac
aacttcattggtactgcggattggcgttctggggtcttgcatcccaagcgcttgatttct
caggcccattaa
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