Polynucleobacter paludilacus: AOC06_06295
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Entry
AOC06_06295 CDS
T08333
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
ppal
Polynucleobacter paludilacus
Pathway
ppal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AOC06_06295 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppal03400
]
AOC06_06295 (recO)
DNA repair and recombination proteins [BR:
ppal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AOC06_06295 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AOC06_06295 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
QWD86565
LinkDB
All DBs
Position
complement(1191545..1192279)
Genome browser
AA seq
244 aa
AA seq
DB search
MASIRIVDEPAFVLHSIPYKETSLILDVFTRQHGRMALIAKGAKRPHSVLRPVLQRFQPL
LVSWSGKSELRTLTKSEWVGGTPALVGDALLCGFYLNELLVKFLAREDDYERLYDRYTET
ITALSNLEFESKGLEEILRPFELALLQETGYAAALDHCVETQDKPEPSLQYVYQPERGVR
PVQADDPGHWPVLSGQSLLNIAVGHFSDPVTLAQSKQLMRFLLGLHLQDQVLTTRQILID
LKKI
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgatccggatcgttgacgagcccgctttcgtattgcacagtattccctataaa
gagaccagtctcatcttggatgtctttactaggcaacatggtcgtatggctctgattgct
aaaggtgccaagcgcccacactctgttctgcgccccgtattacagcgttttcagccgctc
ctagtttcgtggagcggtaagtcagagctgcgtaccttaactaaatcggagtgggttggt
ggtactcctgccttggttggtgatgcactgctatgtggtttttatttgaacgagctgcta
gtgaaattcctggctcgtgaagatgactatgaaagactctacgatcgctatacagaaacc
attacagcgctttctaatctcgagtttgaatctaagggcctagaagaaatattgcgtcct
tttgagttagcgctattacaagaaacgggttatgccgcagccttagaccattgtgtagaa
acccaagataaacccgagccatctctgcagtatgtttaccagcctgaaagaggcgtaaga
ccagtgcaggcggatgaccctggtcactggccagttttgagtggtcaatctctgctcaat
attgcagttggtcatttttctgatccggtaactcttgcccaaagtaaacagctgatgcgc
tttctgttgggattgcatcttcaggatcaagtcctgacgacccgtcagatcttgattgat
ctcaagaaaatctag
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