Polynucleobacter paludilacus: AOC06_06560
Help
Entry
AOC06_06560 CDS
T08333
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
ppal
Polynucleobacter paludilacus
Pathway
ppal03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
ppal00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
AOC06_06560 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ppal03011
]
AOC06_06560 (rpsA)
Ribosome [BR:
ppal03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
AOC06_06560 (rpsA)
Bacteria
AOC06_06560 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
QWD86616
LinkDB
All DBs
Position
complement(1239601..1241274)
Genome browser
AA seq
557 aa
AA seq
DB search
MSESFAELFEESLTRSNMKTGQVISAEVLRIDHNFVVVNAGLKSEAFIPVEEFHNDAGEI
EVSPGDFVSVAIDALENGYGDTILSRDKAKRLASWMNLEKALEQAEIVTGTVTGKVKGGL
TVMVNGIRAFLPGSLVDTRPIKDTSPYEGKTMEFKVIKLDRKRNNVVLSRRAVVEASQGK
ERAELMSNLKEGAVVTGLVKNITDYGAFVDLGGIDGLLHITDLAWRRVRHPSEMLTVGQE
VTAKILKFDQEKNRVSLGVKQLGDDPWVGIARRYPPNTRLFGKVTNLTDYGAFVEIESGI
EGLVHVSEMDWTNKNVAPSKATALGTEVEVMVLDIDEDKRRISLGIKQCKANPWEEFSRA
HQKGDKLSGAIKSITDFGVFIGLPGGIDGLVHLSDISWNEPGEEAVKKYKKGDEVEATVL
AIDVEKERISLGIKQLSGDPFNNYTSVSDKGSLVTGTVKAVDAKGATIHLADEVEAYLRA
SEISTDRVEDARNVLKEGDSVTAMIINIDRKSRVINLSIKAKDSSDQQDAMSKLQGDAQS
GTTNLGALLKAKMDNQG
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaatcatttgcagaactatttgaagaatcattaacccgatcgaatatgaagacc
ggccaagttatttcggctgaagtcctccgcatcgaccataacttcgttgttgttaacgct
ggtttgaagtctgaagcgtttattcctgttgaagaattccataacgacgctggcgaaatt
gaagtaagccccggcgatttcgtttctgttgcgatcgatgcccttgaaaacggctacggc
gacaccatcctctcccgcgataaagcaaaacgcttagcgtcatggatgaatctagaaaaa
gcactcgagcaagctgagattgtcactggtacggttaccggtaaggttaaaggcggcttg
acggtgatggtgaacggtatccgcgcattcttgcctggctcactcgttgacactcgtccc
attaaagacaccagcccttatgagggcaaaaccatggagttcaaggttatcaagttagac
cgtaagcgtaacaacgtcgtgttgtcacgtcgtgcggttgttgaagccagccaaggtaaa
gagcgtgctgagttgatgtctaacctaaaagaaggcgcagtagtgactggcctggttaag
aacattactgactacggcgcattcgttgacctcggcggtatcgatggcctcttgcacatt
accgatttggcatggcgtcgtgtgcgtcacccaagcgaaatgttgactgttggtcaagaa
gtgaccgctaagattttgaagttcgatcaagagaagaatcgtgtgtctcttggtgtgaaa
cagcttggcgatgatccatgggtaggtatcgctcgtcgttatccaccaaacacccgttta
ttcggcaaggtaaccaacttgactgattacggtgcattcgttgaaatcgaatctggtatc
gaaggcttggtacacgtttctgaaatggattggaccaataagaacgttgctccaagtaaa
gcaacggccttgggtactgaagttgaagtcatggtgttggatattgatgaagataagcgt
cgtattagcttaggcatcaagcagtgcaaagccaatccatgggaagaattctcacgcgcc
catcaaaagggtgacaagttaagcggtgcaatcaagtcaattactgactttggtgtattc
attggcttgcctggcggcatcgatggtttggttcatctttccgatatttcttggaatgag
cctggcgaagaagctgttaagaaatacaaaaaaggtgatgaagtggaagctaccgtattg
gccattgatgttgagaaagagcgtatctctctcggtatcaagcaattgtctggtgaccca
ttcaataactacacatccgttagcgacaagggtagtcttgttactggcactgtgaaggct
gttgatgctaaaggtgcaaccattcatttggctgacgaagttgaagcttacttacgtgct
tcagaaatctcaaccgatcgcgttgaagatgcacgcaatgtattgaaagaaggcgatagc
gtgactgccatgatcattaatattgatcgtaagtctcgcgtaatcaatctttcgattaag
gcaaaagacagctctgatcaacaagatgcaatgagcaaactccaaggtgatgcgcagtct
ggcacaaccaacttgggcgccttgcttaaagcaaaaatggacaatcaaggctaa
DBGET
integrated database retrieval system
