Polynucleobacter paludilacus: AOC06_06595
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Entry
AOC06_06595 CDS
T08333
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ppal
Polynucleobacter paludilacus
Brite
KEGG Orthology (KO) [BR:
ppal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppal03032
]
AOC06_06595 (gyrA)
03400 DNA repair and recombination proteins [BR:
ppal03400
]
AOC06_06595 (gyrA)
Enzymes [BR:
ppal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AOC06_06595 (gyrA)
DNA replication proteins [BR:
ppal03032
]
Prokaryotic type
DNA Topoisomerases
AOC06_06595 (gyrA)
DNA repair and recombination proteins [BR:
ppal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AOC06_06595 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QWD86622
LinkDB
All DBs
Position
complement(1247602..1250310)
Genome browser
AA seq
902 aa
AA seq
DB search
MEQAAKETLPISLEDEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMYELNNDWN
RAYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM
RYTEIRLRKIAHDLLADLDKETVDFGPNYDGSEREPLILPAKVPNLLINGSSGIAVGMAT
NIPPHNLDEVVQACLHVLHNPDCTIDELIEIIPAPDFPTAGIIYGVQGVREGYRTGRGRV
VMRAKTHFEDIDKGSRQAIIVDELPYQVNKKNLLERIAELVNEKKVEGISDLRDESDKSG
MRVVIELKRGEVPEVVLNNLYKSTQLQDNFGMNMVALVDNQPRLLNLKQMLEYFLQHRRE
VVTRRTIFELRKARERGHVLEGLAVALANIDEFIAIIKAAANPVEAKTELMGKNWDSSMV
REMLARAETDTPGGRNAYRPDGLLPEYGMQSSGLYRLSDSQAQEILQMRLQRLTGLEQDK
IVSEYKDVMSEIADLLDLLAKSERVTQVIESELKEVQAEFGIAGSDNGRRSFIEMNATEL
FTEDLITPQDMVVTLSHTGYMKSQPLSEYRAQKRGGRGKQAAATKDEDWIDTLFVANTHD
TILCFSDRGRMYWLKVWEVPQGSRTSRGKPIVNMFPLIEGEKITVILPIKGYQDDQYVFM
ATSLGTVKKTRLSDFSNPRKAGIIAVDLNEGDFLVGAAITDGQHDVMLFSDAGKAVRFDE
NDVRPMGRTARGVRGMNLGEGQQVIAMLVAPAEVAEGAQISVADAEAIATPGSVLTATEN
GYGKRTPIAEYTRHGRGTKGMIAIQTSERNGKVVAAALVSPEDQIMLITTGGVLVRTRVS
EIREMGRSTQGVTLINVDEGTRLSGLQRIAESDSDDEDDLAEDDSIDAGDVGDAASDTAS
DA
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggaacaagccgctaaagaaacactaccaatatccctagaagacgaaatgcggcggtcc
tatttggactacgctatgagcgtcattgtcggcagagccttgccagacgtgcgtgatggc
ctcaagccagtacaccgccgggtcttatttgcgatgtatgaattaaacaacgattggaac
cgtgcttacaaaaaatctgcccgtatagttggcgatgtaatcggtaaataccatccccat
ggcgattctgcggtgtatgacaccattgtccggatggcccaagatttctctctacgctat
atgttagttgacggccagggtaactttggctccgtggacggggataacgctgctgcgatg
cggtataccgagatccgcttgcgcaaaatcgcccatgacctattggctgatttggataag
gaaacggtcgattttgggccaaattacgacggtagcgagcgcgagcccctgattctgccg
gccaaagtgcccaatttgctcattaacggcagctcaggcattgcggtaggtatggcaacc
aatatcccccctcataacttggatgaggtggttcaggcctgtttacacgtcttgcacaac
ccggattgcaccattgatgagttgattgagatcatcccagcgccagatttccctactgcc
ggaattatttatggtgttcaaggtgtacgtgagggttatcgcaccggtcgcgggcgcgtt
gtcatgcgtgcgaagacccactttgaagatattgataagggttcgcgtcaagccatcatc
gttgatgagttgccttatcaagtcaataagaagaacttgctcgagcgcattgctgagtta
gtgaatgagaaaaaagtcgaaggtatttctgatttgcgggatgagtccgacaaatctgga
atgcgcgttgtgattgagctcaagcgtggcgaagtacctgaagttgttctgaataattta
tataagagtacgcagttacaagataacttcggtatgaacatggtggccttggttgataac
cagccacgcctgttgaacttgaagcagatgttggagtatttcttgcagcatcgtcgtgaa
gtcgttacccgtcgcacgatttttgaacttcgtaaagcgcgagagcgtggtcatgtgctc
gagggcttagctgtcgcattagcaaacattgatgaattcattgcgatcatcaaggctgct
gccaacccggtggaagcaaagacagagttgatgggcaagaattgggattcctcgatggtg
cgtgagatgttggcgcgtgcagagacagataccccaggcggtcgtaatgcttatcggcct
gatggcctcttgcctgaatacggcatgcagagcagtggcctctatcgcttatctgatagc
caagcacaagaaattctgcaaatgcgtttgcaacgtttgactggcttagagcaagacaag
attgtttctgagtacaaagacgtcatgtctgagattgctgacttgctcgacttattggct
aaatcagagcgagtcactcaggtcatcgaaagcgaattgaaagaagtgcaagccgagttc
ggcatcgcgggtagtgacaacggtcgtcgctcatttattgagatgaatgcaactgagctc
ttcactgaagatctcattacaccgcaagatatggttgtcactctttcacacactggatat
atgaagagtcagccgctcagtgagtatcgtgcgcagaagcgcggtggtcgcggtaagcaa
gctgcagcaaccaaagatgaagactggatcgatactttattcgtagcaaatacacacgac
acaattttgtgtttttctgatcgcggtcgcatgtattggctcaaagtctgggaagtacct
caaggtagtcgcacctcaagaggtaagcccatcgtcaatatgttcccgctgattgaaggc
gagaagatcactgtgattctgccaattaaaggctatcaggatgatcagtacgtctttatg
gcaaccagcttaggtaccgttaagaagacccgtttatctgacttctctaacccacgcaag
gccggcattattgcggttgatttgaatgagggcgatttcttggtgggcgcagcaattact
gatggccaacacgatgtcatgttgttctctgatgctggtaaggcggtgcgctttgatgag
aatgacgttcgtccaatgggtcggactgctcgaggcgtgcgcggtatgaacttaggtgaa
ggtcagcaagtgattgcaatgctagtagctcctgcggaagtggcagagggcgcgcagatt
agcgtggcagatgctgaagccattgcgactcctggaagcgtcttgactgcaactgaaaat
ggttatggcaagcggacgccaatcgctgaatatacccgtcatggtcgcggtactaagggc
atgatcgccattcagacatcagagcgtaacggcaaagttgttgctgctgctctcgtttct
cctgaagatcaaatcatgttgattactacgggtggtgtcttagtgcggacgcgtgtctct
gaaatcagagagatgggtcgctcaacgcaaggtgtcacactcatcaacgtagatgagggg
actcgtttatctggcttgcagaggattgctgaaagcgattcagatgacgaggatgatctc
gcggaagatgattcgattgatgctggcgatgtcggtgatgctgctagcgatactgctagt
gatgcctaa
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