Polynucleobacter paludilacus: AOC06_07030
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Entry
AOC06_07030 CDS
T08333
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
ppal
Polynucleobacter paludilacus
Pathway
ppal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AOC06_07030 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppal03400
]
AOC06_07030 (xseB)
Enzymes [BR:
ppal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
AOC06_07030 (xseB)
DNA repair and recombination proteins [BR:
ppal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
AOC06_07030 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
MinC_N_1
ABC_tran_CTD
Cob_adeno_trans
MnmE_helical
Myosin-VI_CBD
Motif
Other DBs
NCBI-ProteinID:
QWD86702
LinkDB
All DBs
Position
complement(1324321..1324554)
Genome browser
AA seq
77 aa
AA seq
DB search
MASKKPENSGAGLEVQIDPNLRYEQAVKELEKLISDMESGKFSLEETLLAYQRGAALLKH
CQAVLAQVEQQVRVFEA
NT seq
234 nt
NT seq
+upstream
nt +downstream
nt
atggcatctaaaaaacccgagaactcaggcgctggcctagaggttcaaattgatccgaat
ttgcgctatgagcaagccgttaaagagcttgagaagctgatttctgatatggaatcaggc
aagttttctttggaagaaaccttgttggcctaccaacggggcgccgccttgcttaaacat
tgccaggctgtcttggcgcaagttgagcaacaggtgagagtcttcgaagcttag
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