Polynucleobacter paludilacus: AOC06_07055
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Entry
AOC06_07055 CDS
T08333
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ppal
Polynucleobacter paludilacus
Pathway
ppal03030
DNA replication
ppal03410
Base excision repair
ppal03420
Nucleotide excision repair
ppal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AOC06_07055 (polA)
03410 Base excision repair
AOC06_07055 (polA)
03420 Nucleotide excision repair
AOC06_07055 (polA)
03440 Homologous recombination
AOC06_07055 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppal03032
]
AOC06_07055 (polA)
03400 DNA repair and recombination proteins [BR:
ppal03400
]
AOC06_07055 (polA)
Enzymes [BR:
ppal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AOC06_07055 (polA)
DNA replication proteins [BR:
ppal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AOC06_07055 (polA)
DNA repair and recombination proteins [BR:
ppal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AOC06_07055 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AOC06_07055 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
Motif
Other DBs
NCBI-ProteinID:
QWD86707
LinkDB
All DBs
Position
complement(1328357..1331107)
Genome browser
AA seq
916 aa
AA seq
DB search
MTKHRLLLIDGSSYLYRAFHAMPDLRNGAGDPTGAIYGMVNMMRRARSEIQADHIACIFD
AKGRTFRDEMYPDYKANRSPMPEDLVKQIEPIHALVKALGWPVLVVSGVEADDVIGTLAC
QASQAGWETIISTGDKDLAQLVNSSVSLINTMTDERLDIEGVVAKFGVPPERIVDYLSII
GDTVDNVPGVPKAGPKTANKWLAEFGDLDNLMANADQVKGVVGENLRAALTWLPQARQLI
TVKTDCDLSLHVPSLDELHAKPEDSQLLRELFERYAFKTWLREVEQAGGSSQATSPSSAA
LEATTSLSPEAGAMHSAVEKNYECIVDEAGLDKWIQKIQGASLTAVDTETTSLDALAAQL
VGISLSVNAGEACYIPVGHLNAPEQLKREYVLDRLKPWLESKTHFKVGQNLKYDAHIFAN
YGITLQGVQFDTLLESYVLESHMPHNMDNLAERHLGMKTIKYEEVCGKGVHQIGFDQVDL
QTATKYAAEDADITLRLHLALWPQIQASPGLLYVYEKIEMPAMRVLGIMERNGIRIDSAL
LAKQGQEIGKRLLALEGEIHQLAGQPFNIQSPKQIAEILFGQLQLPVIKKTPSGSPSTDE
EVLQKLAEDYPLPARILDYRSLAKLMSTYIEKLPRMADPQTGRVHTNFSQAVAVTGRLAS
SDPNLQNIPVRTEEGRRIREAFIPAPGCKLLSADYSQIELRIMAHIAEDANLLEAFATGK
DVHQATAAEIFGIPLAEVSSEQRRYAKVINFGLIYGMSAFGLAGNLGIERGAAQNYIAKY
FERYPGVAQYMERTRLEARDRGYVETVFGRRLWLPEIKSNGPRRQGAERAAINAPMQGTA
ADLIKLAMIAVEDWLEKEQLKTKMLLQVHDELVFDVPMDEIELLQAKLPDLMCQVAQLKV
PLVVSIGVGDNWEEAH
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgactaaacacagactcttgttgatagacggctcaagctacctctatcgtgcctttcat
gccatgccagacctcagaaatggggcgggtgaccccactggggcgatctatggcatggta
aatatgatgcgccgggctcgctctgagattcaggctgaccatattgcctgtatttttgat
gccaaaggcaggaccttccgggatgagatgtaccctgattacaaggctaatcgctctccc
atgccagaagatttagtgaagcaaatcgagccaattcatgccttggtcaaggccttgggc
tggcctgttttagtggtttcaggggtcgaggctgatgacgtgattggcaccttggcttgc
caagcaagtcaggctggctgggagacgatcatctctacaggtgataaagatttagcccag
ctcgtgaactcgtcagtgagtttgattaatacgatgactgatgagcgcctagatattgaa
ggggtggttgcgaagtttggagtacctccagagcgcatcgtggattacttaagcatcatc
ggcgatacagtggataacgtacctggcgtaccaaaagcaggtccaaagacggcgaataaa
tggttggctgagttcggagaccttgataacttgatggctaatgccgatcaagtcaagggt
gtcgttggtgaaaatttgcgggcagccctcacttggttgccgcaagcgcgacaactcatt
acggtgaagacggattgtgatttgtcattacatgtgcccagcttagatgagcttcatgcc
aaaccagaagacagtcagctactgcgtgaattatttgaacgttacgctttcaaaacttgg
ctacgcgaagtcgagcaggccggtggttcatctcaagcaacttcaccaagttccgcggcc
ttggaggctaccacttcactatcacctgaagccggcgcaatgcacagtgctgtcgaaaaa
aattatgagtgcattgtggatgaagctggtctagataaatggattcagaaaattcaagga
gctagcctcaccgcagtcgatactgagactactagtttggatgcacttgccgcacagcta
gtaggtatttccttgtcggtaaatgcaggcgaggcctgctacattccggtgggtcatctc
aatgcgccagagcaattaaagcgggagtatgtacttgaccgactaaagccttggctagag
agcaaaacgcatttcaaggtcggtcaaaacttaaagtacgacgcccatatttttgcaaac
tatggcattaccttacagggtgtacagttcgataccttgctcgagtcttatgtgttggag
tctcatatgccacacaatatggacaacttagcagaacgtcatctgggtatgaagacgatt
aagtatgaagaggtttgtggcaaaggcgttcatcagattggttttgatcaggttgatcta
caaacagccaccaagtacgctgctgaagatgctgatatcaccttacgcttgcatctggcc
ttgtggcctcaaattcaggctagccctggcttgttgtatgtctatgaaaagattgagatg
cccgcaatgcgcgtactcggcatcatggagcgcaatggcattcggattgactctgcctta
ttggccaagcagggtcaagaaattggtaaacgattgttagctttagagggtgagatccat
caattagccggtcagccttttaatattcagtcaccaaaacaaattgcggagattctgttt
ggccagcttcaattacctgtgatcaagaaaaccccatctggtagcccttccaccgatgag
gaagttttacaaaagctggcagaagactacccattacctgcacgcattttggattaccgt
agtctcgctaaattgatgtcgacttatattgagaaattgccaaggatggcagatcctcaa
actgggcgcgtgcatacgaatttctctcaagccgtcgcggtcaccggacgcttggcatcg
agcgatcctaatttacaaaatattccggtacgaactgaagaggggcggcgcattcgcgaa
gctttcattcccgcgcctgggtgtaaattgctctcagcggactattcacaaatcgagttg
cgcatcatggcgcatattgctgaagatgcgaatctactcgaggcatttgctacgggcaag
gatgtacaccaagcaactgctgctgagatctttgggattcccttggcagaggtgagttct
gagcagcgacgttatgccaaggtaattaacttcggcttaatttatggcatgagcgcattt
ggtctggcgggaaatttgggtattgaaagaggggcggctcagaattacatcgccaagtat
tttgagcgataccctggcgttgctcaatacatggaaagaacccgtctagaggctcgcgat
aggggttatgtcgaaaccgtttttggtagacgcttgtggttgcctgagattaagtccaat
ggtccgcgcagacaaggtgcggaacgagccgcaattaatgctcctatgcaaggtactgca
gcagatttaattaagctggcaatgattgcagtagaagattggttggaaaaggagcaattg
aagaccaagatgctcttgcaggtccatgatgaattggtgtttgatgttcccatggacgag
attgaactcttacaagcgaaattgcctgatttgatgtgtcaggttgcgcaacttaaagtc
ccattagtggttagtattggggttggtgataactgggaggaagcacattaa
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