Polynucleobacter paludilacus: AOC06_07475
Help
Entry
AOC06_07475 CDS
T08333
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ppal
Polynucleobacter paludilacus
Pathway
ppal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AOC06_07475 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppal03019
]
AOC06_07475 (groL)
03110 Chaperones and folding catalysts [BR:
ppal03110
]
AOC06_07475 (groL)
03029 Mitochondrial biogenesis [BR:
ppal03029
]
AOC06_07475 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppal04147
]
AOC06_07475 (groL)
Enzymes [BR:
ppal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
AOC06_07475 (groL)
Messenger RNA biogenesis [BR:
ppal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AOC06_07475 (groL)
Chaperones and folding catalysts [BR:
ppal03110
]
Heat shock proteins
HSP60 / Chaperonin
AOC06_07475 (groL)
Mitochondrial biogenesis [BR:
ppal03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
AOC06_07475 (groL)
Exosome [BR:
ppal04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AOC06_07475 (groL)
Exosomal proteins of other body fluids (saliva and urine)
AOC06_07475 (groL)
Exosomal proteins of breast cancer cells
AOC06_07475 (groL)
Exosomal proteins of colorectal cancer cells
AOC06_07475 (groL)
Exosomal proteins of bladder cancer cells
AOC06_07475 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QWD86784
LinkDB
All DBs
Position
complement(1426074..1427726)
Genome browser
AA seq
550 aa
AA seq
DB search
MAAKDVVFGDSARTKMVEGVNILANAVKTTLGPKGRNVVMERSFGGPTITKDGVSVAKEI
ELKDKLQNMGAQMVKEVASKTADIAGDGTTTATVLAQSIVREGMKYVVSGHNPMDLKRGI
DKAVTAALEELKKISKPCTTTKEIAQVGSISANSDTSIGQRIAEAMEKVGKEGVITVEDG
KSLEDELEVVEGMQFDRGYLSPYFINQPEKQVAVLESPYVLLFDKKIANIRDLLPVLEQV
AKSGRPLLIIAEDVEGEALATLVVNNIRGIIKTCAVKAPGFGDRRKAMLEDIAVLTGGTV
IAEEIGLTLEKTTLEHLGQAKRIEVGKENTIIIDGAGDAKAIEARVKNIRVQIEEATSDY
DKEKLQERVAKLAGGVAVIRVGAATEVEMKEKKARVDDALHATRAAVEEGIVPGGGVALI
RAMQGIKGLKGDNADQDAGISIVLRAMEEPLRIIVSNAGDEASVVVNAVLASKGNNGYNA
ATGEYGDLVAQGVIDPTKVTKTALVNAASVAALLLTTDCAICEAPKDESAGGGMPDMGGM
GGMGGMGGMM
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaagacgtcgtatttggagatagcgcccggaccaagatggttgagggtgtc
aatattctcgcgaacgcagtaaaaacaacattgggaccaaagggtcgcaatgtggtgatg
gagcgctcctttggtggcccaactattactaaagatggtgtatctgtagcaaaagaaatc
gaactcaaagataagctccagaacatgggcgcgcagatggttaaagaagttgcttctaaa
accgctgatatcgcgggtgacggaacaactaccgctactgtcttagctcagtcgattgtg
cgcgaaggcatgaagtatgtcgtatcaggccataatccaatggatttgaagcgcggtatt
gataaggcggtaactgctgcccttgaagaactcaagaagatcagcaagccttgcactact
accaaagagatcgctcaagttggctcaatctccgctaatagcgataccagcattggtcag
cgcattgctgaagcgatggaaaaagtgggcaaagaaggcgtgattacggttgaagatggt
aagtctttagaagacgaacttgaagtagttgaaggtatgcagtttgatcgtggttacctc
tcgccttatttcattaatcaacctgagaaacaagtggctgttttagaaagcccttatgtt
ctgttgtttgacaagaagattgccaatatccgcgatttgctcccagtgctcgagcaagta
gcaaagtctggccgcccattgttgatcattgctgaagatgtagaaggcgaagccctggca
actttagttgtgaataatattcgcggcatcatcaagacctgtgctgttaaggctccaggc
tttggtgatcgtcgtaaggcaatgctcgaagatatcgccgtattgactggcggtactgtg
attgctgaagagattggcttaacacttgagaaaaccacccttgagcatttaggtcaggca
aagcgcattgaagttggtaaagaaaataccatcatcattgatggcgctggtgatgcaaaa
gcgatcgaagcacgtgtgaagaacattcgtgtacagatcgaagaagcgactagcgactac
gacaaagaaaaattgcaagagcgtgtagccaagttggctggcggtgttgcagtgattcgg
gttggtgccgctactgaagtcgagatgaaagaaaagaaagcccgcgtggacgatgcattg
catgcaacccgtgcagctgttgaagagggcattgttcctggcggcggcgtagctttgatt
cgtgcaatgcaaggtatcaaaggtttgaagggcgacaacgctgatcaagacgctggtatt
agcatcgtattgcgcgccatggaagagcctctgcgcatcatcgtttctaacgctggtgat
gaagcaagcgtagttgtgaatgcggtattggccagcaaaggcaataacggttacaacgca
gctaccggtgagtatggcgatttagtcgcacagggcgtgatcgatccaaccaaggtaacc
aaaactgcattggttaatgcagcctctgttgcagccttattgttgaccaccgattgcgct
atctgtgaagccccaaaggatgagtctgctggtggcggtatgcctgatatgggcggcatg
ggtggtatgggtggtatgggcggaatgatgtaa
DBGET
integrated database retrieval system
