Polynucleobacter paludilacus: AOC06_08025
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Entry
AOC06_08025 CDS
T08333
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
ppal
Polynucleobacter paludilacus
Brite
KEGG Orthology (KO) [BR:
ppal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppal03021
]
AOC06_08025 (rpoH)
Transcription machinery [BR:
ppal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AOC06_08025 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
QWD86881
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All DBs
Position
1536323..1537264
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AA seq
313 aa
AA seq
DB search
MVEKKAYKPTARAVPTVLAASQPGGAMAFPTMPSLGVGTLDAYIAYVNRVPMLSAAEELH
LAQEFRRTENVDAARTLVLSHLRLVVSVARQYLGYGIPHADLIQEGNVGLMKAVKRYDPS
QGARLVSYSIHWIKAEIHEYILKNWRLVKVATTKAQRKLFFNLRSNKPTLATLKPSEVDA
LAKALDVRGEDVKEMEMRLAGGDITLEGDDRDEDSAYAPIQWLADSSQEPTAMLAAVEAD
NLQGPQLDKALMSLDERSRNIVQSRWLAMDADGHGTKTLHDLAAEYGISAERVRQIETSA
LKKMRTLLQAQAA
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaaaagaaagcttacaagccaaccgctcgtgctgtgcccaccgtcctagcggcg
tcgcagcctgggggtgctatggcctttcctaccatgccatcccttggggttggcacttta
gatgcttatattgcctacgtcaatcgcgtaccaatgttaagcgctgcagaagaattgcat
ctagcgcaagagtttcgtcgcactgaaaatgtggatgccgcgagaactttggtgctctct
caccttcgtttggtggtatcggtcgcgcgtcagtatttaggctacggcattccacatgca
gacctgattcaagaaggtaatgtgggtctgatgaaggccgttaaacgctacgatcctagt
caaggcgcacgcttggtgtcttattcaattcattggattaaagcggagattcatgagtac
attcttaagaattggcgcttagtcaaggtagcaacaactaaagcacagcgcaaactgttc
tttaatttacgcagtaacaagcccactctagccacgctcaagcccagtgaagtcgatgcc
ctggcaaaagcactagacgttcgcggcgaagatgtaaaagaaatggaaatgcgacttgct
ggtggcgatatcacgctagaaggtgatgatcgtgatgaagactctgcttatgcaccaatt
caatggttggcagattcaagtcaagaacccactgccatgctcgcagccgtagaggcagac
aatcttcagggtcctcaattagataaagcattaatgtctctcgacgagcgcagccgcaat
attgtgcaatctcgttggttggcaatggatgccgatggtcatggcactaaaacgctacat
gaccttgcagcagagtatggaatttctgccgagcgcgtgagacagatcgaaacgtctgct
ctcaaaaagatgcgtactttacttcaagcgcaagccgcttaa
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