Polynucleobacter paludilacus: AOC06_08400
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Entry
AOC06_08400 CDS
T08333
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ppal
Polynucleobacter paludilacus
Pathway
ppal03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AOC06_08400 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppal03400
]
AOC06_08400 (xth)
Enzymes [BR:
ppal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
AOC06_08400 (xth)
DNA repair and recombination proteins [BR:
ppal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
AOC06_08400 (xth)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
DUF5648
Motif
Other DBs
NCBI-ProteinID:
QWD86951
LinkDB
All DBs
Position
1602857..1603639
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AA seq
260 aa
AA seq
DB search
MLRIISANLNGIRSASKKGFLPWMLAQKADFVCMQELKAQRDDLEEDILNPGGLNGFFHH
AEKKGYSGCGIYTPHQPDDVLYGFGNPEFDAEGRYVEARFKKLSIISVYMPSGSSSEDRQ
VAKFRYLEAFLPHLVKLKKSGREIVLCGDVNIAHQEIDLKNWKGNLKNSGFLPEERAWLT
NLFDQVGYVDVYRQLEPSASEECYTWWSQRGQAYAKNVGWRIDYQIATPEIASSALKTSI
YKAERFSDHAPLIVDYDWSI
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgttacgcatcatttccgctaacctcaacggtattcgttccgcaagcaaaaaaggcttt
ctgccatggatgcttgctcaaaaggcagactttgtctgcatgcaagaactcaaagcccaa
cgagacgatctcgaagaagacattctcaatcccgggggactaaacggcttcttccaccat
gctgaaaaaaagggttacagtggctgcggtatttataccccccaccaacctgatgatgtt
ctttatggctttggtaatcctgagtttgatgctgaaggtcgctatgtcgaagcccgcttt
aaaaaactgtcgatcatctcggtatatatgccctctggctcaagctcagaggataggcag
gtagccaagtttcgctatcttgaggcttttttgccccacctcgttaagctgaaaaagtct
ggtcgtgaaattgtgctctgtggcgacgtcaatattgcccatcaagaaatcgatcttaaa
aactggaagggcaatctcaagaactcaggtttcttgcctgaggagcgcgcctggctcacc
aatttatttgatcaagtgggctatgtggatgtctatcgtcagcttgaaccaagtgctagt
gaagagtgctatacctggtggagccagcgtgggcaggcctatgcgaagaatgttgggtgg
cggattgactatcaaattgctacgcctgaaattgccagcagcgctctgaaaacgtcgatt
tataaggcagaacgtttctcagatcatgcgcccctcattgttgattacgattggtcgatc
tag
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