Polynucleobacter paludilacus: AOC06_08585
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Entry
AOC06_08585 CDS
T08333
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
ppal
Polynucleobacter paludilacus
Brite
KEGG Orthology (KO) [BR:
ppal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppal03032
]
AOC06_08585
03036 Chromosome and associated proteins [BR:
ppal03036
]
AOC06_08585
03400 DNA repair and recombination proteins [BR:
ppal03400
]
AOC06_08585
DNA replication proteins [BR:
ppal03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AOC06_08585
Chromosome and associated proteins [BR:
ppal03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
AOC06_08585
DNA repair and recombination proteins [BR:
ppal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
AOC06_08585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
DUF364
Urease_beta
UBA_HYPK
HTH_10
Motif
Other DBs
NCBI-ProteinID:
QWD86983
LinkDB
All DBs
Position
complement(1634927..1635208)
Genome browser
AA seq
93 aa
AA seq
DB search
MNKAELVEKIANDADISKATADRVLSATIEQIIKAVTKGDDVQLIGFGTFKSGKRAARVG
RNPATGAEIKIPAAKTAKFSAGKAFKDAVNKRK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagcagaattagtagaaaaaattgcaaacgatgcagatatctctaaagcaaca
gcagatcgcgtattgagcgcaaccattgagcaaatcatcaaagcagttaccaaaggtgat
gatgtgcaattaatcggttttggaacattcaaatcaggtaagcgcgcagcccgtgttggc
cgtaatcctgcaactggtgcagaaattaagatcccagccgctaaaacagcaaagttttct
gctggtaaagcattcaaggatgcagtgaataaacgcaagtaa
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