KEGG   Pteronotus mesoamericanus (Parnell's mustached bat): 129062662
Entry
129062662         CDS       T09558                                 
Symbol
DDB1
Name
(RefSeq) DNA damage-binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
ppam  Pteronotus mesoamericanus (Parnell's mustached bat)
Pathway
ppam03420  Nucleotide excision repair
ppam04120  Ubiquitin mediated proteolysis
ppam05161  Hepatitis B
ppam05170  Human immunodeficiency virus 1 infection
ppam05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:ppam00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    129062662 (DDB1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    129062662 (DDB1)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    129062662 (DDB1)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    129062662 (DDB1)
   05161 Hepatitis B
    129062662 (DDB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ppam04121]
    129062662 (DDB1)
   03400 DNA repair and recombination proteins [BR:ppam03400]
    129062662 (DDB1)
Ubiquitin system [BR:ppam04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     129062662 (DDB1)
DNA repair and recombination proteins [BR:ppam03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      129062662 (DDB1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      129062662 (DDB1)
SSDB
Motif
Pfam: Beta-prop_RSE1_2nd CPSF_A Beta-prop_RSE1_1st Beta-prop_RIG_2nd Beta_propel
Other DBs
NCBI-GeneID: 129062662
NCBI-ProteinID: XP_054419664
LinkDB
Position
Unknown
AA seq 1140 aa
MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
IAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGI
IGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICF
VYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYH
NGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDL
RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRE
TDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS
QEPKALVSEWKEPQGKNISVASCNSSQVVVAVGRALYYLQIHPQELRQISHTEMEHEVAC
LDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSH
YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES
PRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHET
SFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEE
AEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR
TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL
DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGET
STPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTER
KTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH
NT seq 3423 nt   +upstreamnt  +downstreamnt
atgtcgtacaactacgtggtaacggcacagaagcctaccgccgtgaacggctgcgtgacc
ggacactttacttcagctgaagacttgaacctgctgattgccaaaaacacgagattagag
atctatgtggtcactgccgaggggctccggcccgttaaggaggtgggcatgtatgggaag
attgctgtgatggagctcttcaggcccaagggggagagcaaggatctgctgtttatcctg
acagctaaatacaatgcctgcatcctggagtataagcagagtggcgagagcatcgacatc
ataacccgggcccatggcaatgtccaggaccgaattggccgcccttcagagaccggcatt
attggcatcattgatcccgagtgccggatgattggcctgagactctatgatggccttttc
aaggttattccactggatcgggacaataaagagcttaaggcatttaacatccgcctggag
gagttgcatgtcatcgatgtcaagttcctgtatggttgccaagcacctaccatctgtttt
gtctaccaggaccctcagggacggcacgtaaaaacctacgaggtgtctctccgagagaag
gaattcaataagggcccttggaaacaggaaaacgtagaagctgaagcttccatggtgatt
gcagtcccggagccttttggaggggccatcatcattgggcaggaatcaatcacctaccac
aatggggacaaatacctagcgattgcgcctcctatcatcaagcaaagcacgattgtgtgt
cacaatcgtgtggaccccaatggttcccgttatctgctgggagacatggagggacggctc
ttcatgctgcttttggagaaggaggagcagatggatggcactgtcactctcaaggacctc
cgggtggagctccttggagagacctctattgctgagtgcttgacataccttgataatggc
gttgtctttgtcgggtctcgccttggtgactcacagcttgtgaagctcaatgttgacagc
aatgaacaaggctcctatgtagtggccatggaaacctttacaaatttaggacccattgtg
gacatgtgcgtggtggacctggagaggcaggggcaaggacagctggtcacttgctctggg
gctttcaaggaaggttccttgcggatcatccggaatggaattggaatccatgagcatgcc
agcattgacttaccaggcatcaaaggcctgtggccactgcggtctgatcctaaccgggag
accgacgacactttggtgctctcttttgtgggccagacaagagttctcatgttaaacgga
gaggaggtggaagaaacggaactgatgggttttgtagatgatcagcagactttcttctgt
ggcaatgtggctcatcagcaacttatccagatcacttcagcatccgtgaggctggtctct
caagaacccaaagctcttgtcagtgaatggaaggagcctcagggcaagaacatcagtgtg
gcgtcctgcaacagcagccaggtggtagtagccgtgggaagggccctctactacctgcag
atccatccccaggagcttcgacagatcagccacacagagatggaacatgaggtggcctgc
ttggacatcaccccattaggggacagcaacgggctgtcccctctttgtgccattggcctc
tggacagatatctcagcccggatcttgaagctgccctcttttgagctactgcacaaagag
atgctgggtggagagatcattcctcgttccatcctgatgaccacctttgagagtagccac
tacctcctgtgtgccttaggagacggggcacttttctactttggtctcaacatcgagaca
ggcctgctgagcgaccgcaagaaggtgactctgggcacccagcccacggtattgaggact
ttccgttctctttctaccaccaacgtctttgcctgctctgaccgccccactgtcatctac
agcagcaaccacaaattggtcttctccaacgtcaacctcaaggaagtgaactacatgtgt
ccccttaactcggatggctatcctgacagcctggcactggccaataacagcacccttacc
attggcaccatcgacgagattcagaagctgcacatccgcacggttcccctctacgagtct
cccaggaagatctgctatcaggaagtgtcccagtgcttcggggtcctctccagccgtatt
gaagtccaggacacgagtgggggcacgactgctctgaggcccagtgccagcacccaggcc
ctgtcgagcagcgtcagctccagcaagctgttctccagcagtacagccccgcacgagacc
tccttcggggaagaggtggaggtgcacaatctccttatcattgaccagcatacctttgaa
gtgcttcatgcccaccagtttctgcagaacgagtacgccctcagcctggtctcctgcaag
ctgggcaaagaccccaacacatacttcattgtgggcacagccatggtgtacccggaagag
gcggagcccaagcagggtcgtattgtggtgtttcagtattcagatggaaaactacagact
gtggctgaaaaggaagtgaaaggggccgtgtattctatggtggaattcaatgggaagctg
ttggccagcattaatagcacggtgcggctctatgagtggacaacggagaaggagctccgc
accgagtgcaaccactacaacaacatcatggccctgtacctgaagaccaagggcgacttc
atcctggtgggcgacctcatgcgctccgtgctgctgctcgcctacaagcccatggaggga
aactttgaagagattgctcgggactttaaccccaactggatgagcgctgtggaaatcttg
gatgatgataattttctgggggctgaaaatgcctttaacttgtttgtgtgtcagaaagat
agcgctgccaccactgatgaggagcggcaacaccttcaggaggttggtctcttccatctg
ggtgaatttgtcaatgtcttctgccatggctctctggttatgcagaatctgggcgagact
tccacccccacgcagggctcagtgctctttggcacagtcaacggcatgatcggcctggtg
acctcgctgtcagagagctggtacaacctcctgctggacatgcagaatcgactcaataaa
gtcatcaaaagcgtgggcaagattgagcactccttctggagatcctttcatactgagcga
aagacagaaccggccaccggcttcatcgatggagacttgattgagagtttcctagacatc
agccggcccaagatgcaggaggttgtggcaaaccttcagtacgacgacggcagcggaatg
aagcgagaggccaccgcagacgacctgatcaaggttgtggaggagctgacgcggatccat
tag

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