Pteronotus mesoamericanus (Parnell's mustached bat): 129062728
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Entry
129062728 CDS
T09558
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1 isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Pathway
ppam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129062728 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppam03019
]
129062728 (PATL1)
Messenger RNA biogenesis [BR:
ppam03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129062728 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
129062728 (PATL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
129062728
NCBI-ProteinID:
XP_054419729
LinkDB
All DBs
Position
Unknown
AA seq
771 aa
AA seq
DB search
MLRYESLEDCPLDEDEDAFQGLGEEDEEIDQFNDDTFGSGAVDDDWQEAHERLAELEEKL
PVTVHEQTGNGERDEMDLLGDHEENLAERLSKMVIENELEDPAIMRAVQTRPVLQPQPGS
LNSSIWDGSEVLRRIRGPLLTQEMPTVSVLEYALPQRPPQGPEDDRDLSERALPRRSTSP
VIGSPPVRAVPIGTPPKQMAVTGFNQQILCPKPVHVRPPMPPRYPAPYGERMSPNQLCNV
PNSSLLGHPFPPSVPPVLSPLQRAQLLGGAQLQPGRMSPSQFARVPGFVGSPLAAMNPKL
LQGRVGQMLPPAPGFRAFFSAPPPATPPPPQQHPPGPGPHLQNLRPQAPMFRPDTTHLHP
QHRRLLHQRQQQNRNQHRNLNGAGDRGSHRSSHQDHLRKDPYANLMLQREKDWVSKIQMM
QLQSTDPYLDDFYYQNYFEKLEKLSAAEELQGDGPKKERTKLITPQVAKLEHAYKPVQFE
GSLGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRKTLVIIEKTYSLLLDVEDY
ERRYLLSLEEERPALTEERKHKICSMYDNLRGKLPGQERPSDDHFVQIMCIRKGKRMVAR
ILPFLPTEQAADILMTTARNLPFLIKKDAQDEVLPCLLSPFSLLLYHLPSVTVTSLLQQL
MNLPQSAAAPAPSNPHLTAVLQNKFGLSLLLVVLSRGEDLQSSDPATESTENNQWTEVMF
MATRELLRIPQAALAKPISIPTNLVSLFSRYVDRQKLNLLETKLQLVQGIR
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgctccgctacgagtctttggaggattgtcctctggatgaagatgaggatgcatttcag
ggcctgggagaggaagatgaagaaattgatcaattcaatgatgacacatttgggtcaggt
gcagttgatgatgattggcaggaagcacacgagcgactggctgaattggaagaaaagcta
ccggtaacagtccatgaacaaacaggcaatggagaaagggatgagatggacttgttgggt
gaccatgaggagaacctggcagaaaggctcagtaagatggtgattgaaaatgagctagaa
gatccagccatcatgagggcagtgcagaccaggccagttttgcaaccccaaccaggaagt
ctcaattccagcatctgggatggatctgaagttctgaggcgaatccgaggaccactgctt
acccaggaaatgcctacagtgtctgtattagaatatgccttgcctcagaggcccccacag
ggcccagaagatgatcgggacctttctgagcgtgcgttaccaaggcgatccacttcacct
gtcattgggagtcctcctgttagagctgtccccataggcaccccacctaagcagatggct
gtaaccggcttcaaccagcagattctgtgtccgaagcctgtccatgttcgacccccaatg
ccaccgcggtatcctgctccctatggtgagaggatgtctccaaaccagctctgcaatgtc
ccgaactcttccctactgggtcaccctttccctcctagtgttcctcctgttctcagcccc
ctacagagagcgcagctacttggaggagcacagctacagcctggacggatgtctcccagc
caatttgcacgggtccctggatttgttggtagtccgcttgctgccatgaatcccaagctg
ctgcaagggcgagttgggcagatgcttcccccagcaccaggcttccgtgccttctttagt
gctccaccccctgctacaccacctcctccacagcagcacccccctggcccaggacctcac
ctgcaaaacttaagacctcaggccccaatgtttagaccagacaccactcaccttcatcca
cagcaccgtcgacttttgcatcagagacagcaacagaatagaaatcagcatcgcaatctc
aatggtgcaggagacagaggaagtcaccggagcagtcaccaggatcatctccggaaggat
ccatatgccaatctcatgttgcagcgagaaaaggattgggtctctaaaatccagatgatg
caactgcagagcactgatccctacctggatgatttttattaccagaattactttgaaaaa
ctggagaaattgtcagctgctgaagaattgcaaggcgatggccctaaaaaggagcgcacc
aagctcattacccctcaggtggccaaactggagcacgcttataagccagtgcagtttgag
ggctctttgggaaagcttactgtctctagtgtgaataatccccggaaaatgattgatgct
gttgtcacatctcggagtgaggatgatgaaacaaaagaaaaacaggttcgggacaagaga
cgaaagacccttgtcataattgagaagacctacagtttactccttgatgtggaggactat
gaacggcgttacctcctaagtctggaagaagagcgacctgccctgacggaagaaagaaag
cacaaaatttgtagcatgtatgacaacttaaggggaaaattacctggacaagagaggcca
agtgatgaccactttgtacagatcatgtgtatccgaaaagggaagagaatggttgcccgc
attcttcctttcctccccacagagcaagcagctgacattcttatgacgacagccaggaac
ctccctttccttatcaagaaggatgcacaagacgaggtgctgccgtgcttattgagtccc
ttctctctcctcctctatcatcttccgtcagtgactgtcaccagccttctgcaacagcta
atgaacctacctcagagtgcagctgcaccagcaccctctaatcctcacctcacagctgtt
ctccagaacaagtttggcctgtcgctgctccttgtcgtcctgagccgtggggaagacctg
cagagttcagaccctgctacagaatcgacagaaaacaaccagtggacggaggtgatgttc
atggcaacccgagaacttctgcggattccccaagcagccctggccaagccaatctctatc
cccacaaacctcgtatccctcttttctcgctatgttgaccgacagaaactgaacttgctg
gagacaaaactgcagctagttcaggggatacggtaa
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