Pteronotus mesoamericanus (Parnell's mustached bat): 129063904
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Entry
129063904 CDS
T09558
Symbol
DDX20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppam03041
]
129063904 (DDX20)
Enzymes [BR:
ppam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129063904 (DDX20)
Spliceosome [BR:
ppam03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
129063904 (DDX20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
AAA_19
Motif
Other DBs
NCBI-GeneID:
129063904
NCBI-ProteinID:
XP_054420984
LinkDB
All DBs
Position
Unknown
AA seq
822 aa
AA seq
DB search
MAAAFEATAALETKETAVPAEHVAPQVSEPASGPMRSLRTAHDISGPRTRTGDVLLAEPA
DFESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALD
SLVLENLSTQILVLAPTREIAVQIHSVITAIGIRMEGLECHVFIGGTPLSQDKIRLKKCH
IAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMVAV
SATYPEFLANALARYMRDPTFVRLNSSDPSLIGLKQYYKVVNSYPLAHKIFEEKAQHLQE
LFSRIPFNQALVFSNLHSRAKHLADILSSKGFPAECISGNMNQNQRLDAMAKLKQFHCRV
LISTDLASRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLAVTYSCRGEEENTL
MKIAQKCNINLLPLPDPVPPGLMEECSDWDVEVTAAVHTYSLAGAPGQTLKKQIQKMERA
PQTPKAHGNHVASCRNTSVSALSAKSKITTKQKLPVKSHSECGLLENAASPQAPGRAVQV
EGQMKNSVESPAENSNSGQHPVKEESPVSLPQIPCLSAFKIHLPCTWTFAELVEDYEHYI
KEGLEKPVEIIRHYTGPGDQAANPQNGFVRSRIPEERVRVLVSSSQSGNSESDSDSYSSR
TSSQSKGSKSCVEGSSGIQLKDLESTPVDGRISLEQPLNGNDAPNLREHQGAPEIQVKAR
HKEGAKQRVKQGRRDAARRPSYRLQAEPREDEWSDGRGATHVGFPGACQGYEEYWKAYYR
AWHEYYAAASQSYYWNAQRHPGWMAAYHMNTVYLQEMMRGHQ
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgtttgaagccacagcggccttagagaccaaggagactgctgtgcccgcg
gagcatgtggccccacaggtctcggagcccgcctccgggcccatgcggagcctacggacg
gcccacgacatcagtggcccgcggacccgcacgggggacgtactgctggcggagcccgcg
gacttcgagtcgctgctgctgtcgcggccggtgctggaggggctgcgagcggccggcttt
gagcggccctcgcccgtgcagctgaaggccatcccgctgggacgctgcgggctcgattta
attgttcaagcaaagtctggcactgggaaaacctgtgtattctccactattgctttggat
tctcttgttcttgaaaacttaagcacccagattttggtcttggctcctacaagagaaatt
gctgtacagatacattctgttatcacagctattggaataagaatggaaggcttagagtgt
catgtctttattggagggactccattatctcaagacaagatcagacttaaaaagtgtcat
atcgctgttggatctccaggcagaattaaacaactgatagagcttgattacttgaaccca
ggcagtatacgtctctttattttggatgaagcggataagcttttagaagaaggcagcttc
caggagcaaataaattggatttattcttccttgcctgccagtaagcagatggtggccgta
tcagctacttaccctgaatttttggctaatgctttggcaaggtacatgagagatcccact
tttgtaagactaaactccagtgacccaagtctcataggtttgaagcagtattacaaagtt
gttaattcgtaccctttggcccacaagatttttgaggaaaaggctcagcatttacaggaa
ctgttcagcagaattccatttaatcaagccttagtcttttctaatttgcacagcagagcg
aagcatttggctgatatcctttcttctaaaggctttcctgcagagtgcatttcaggcaac
atgaatcagaatcagcgtcttgatgctatggctaaactgaagcagtttcattgcagagtc
ctcatctccacagatttggcttcccgtgggatcgatgctgagaaggtgaatctggtggta
aatctggatgtgccgttggattgggagacatatatgcatcggattggcagagctggccgt
ttcgggactttgggcctggcggtgacctacagctgtcggggagaagaagaaaatacgctg
atgaaaattgcccagaaatgtaatatcaacctcctgcctttaccagaccccgttcctcct
ggccttatggaagaatgttcggattgggatgtggaggttacagcggctgtgcacacgtac
agcttagcaggcgcacccggccagacgctaaaaaagcaaattcaaaaaatggaaagagcc
cctcagaccccgaaagctcatggtaaccatgtggcttcttgtagaaacacttccgtctct
gcattatcagccaagtcaaaaatcaccaccaaacagaagctccctgtgaaaagccactca
gagtgcggactcctggaaaacgcagcgtcaccccaggccccgggccgcgccgtgcaggtg
gaggggcaaatgaagaactctgttgagagcccagctgaaaactcgaacagtggtcagcac
ccggtcaaagaagagtcgccagtgtcactcccccagattccctgtctgtctgccttcaaa
atccacctgccatgcacgtggactttcgcagaattggtagaggattatgaacactatatt
aaggaggggttagagaaacctgtggaaatcatcaggcactacacaggtcctggggatcag
gccgcgaatcctcaaaatggttttgtgagaagtcggattcccgaagaaagagtccgggtg
ctggtaagtagtagccagtctgggaactctgagagtgacagcgattcttacagctcacgg
acttcttcccagagcaaaggaagtaagtcctgcgtggaaggctcttctggtattcagctg
aaagacttggagtctacccccgtggatggccgtatctctttggaacagcctctgaatgga
aatgacgcccctaatctaagagagcatcaaggagcacctgaaatccaggtgaaggcaagg
cataaagagggggccaaacagagagtgaagcagggccgaagagacgcagctaggcggccc
tcctatcggttgcaggcagagccccgggaagatgagtggtctgacggccgtggggcaacc
cacgtgggttttcctggtgcctgtcagggttatgaagagtattggaaggcctactacagg
gcgtggcacgaatactatgctgctgcttcgcagtcgtattactggaatgctcagaggcac
ccgggttggatggcggcctatcacatgaataccgtttatctgcaagaaatgatgcgtggc
catcagtga
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