Pteronotus mesoamericanus (Parnell's mustached bat): 129064280
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Entry
129064280 CDS
T09558
Symbol
SPG11
Name
(RefSeq) spatacsin
KO
K19026
spatacsin
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Pathway
ppam05014
Amyotrophic lateral sclerosis
ppam05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
129064280 (SPG11)
05022 Pathways of neurodegeneration - multiple diseases
129064280 (SPG11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppam03400
]
129064280 (SPG11)
DNA repair and recombination proteins [BR:
ppam03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
129064280 (SPG11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spatacsin_C
Motif
Other DBs
NCBI-GeneID:
129064280
NCBI-ProteinID:
XP_054421447
LinkDB
All DBs
Position
Unknown
AA seq
2445 aa
AA seq
DB search
MAAAKWPGSAAAGGSCNAEDMERVLHMLLLPVPAEATGRLGTRAQLHREQEVLGSLTAAG
SLQVLSLAPAGRGGGGCSLDGPFRQFVWEDSHNSSTPTERPRLLALSESYELLIYEFNLK
DGRCDGTIVYKYSEEMLQKLIKDQNISISLLSLRILSFHNNTSLLFINKCIILHIMFPEK
DAETTVLKYFTLPLPAQAVDNIVDTQLCKGILFVLSSLGWIYIFDTVDGTHVAHVDLALH
QEDMCNEQQQEPAKISSFTSLKVSQDLDVAVITSSFNSAIALNLNLYFRQHPGHLLCEKI
LEDMPIEGPKGIDEDDPVNSDYNMKLTKFSFQVDRSWKAQLLSLNETIKSSKREVSHYAP
WFQNILHLESPKSNNLCTSVPVWAFIPQDIMHSQYNFSQKDNAKTSDPGRAWKRMYISEH
EEPIELRCVSVTGFTALFTWAVERTGCTIVLWDLETEGMQCFCLGKKCIPIDSSGDQQLC
LALTENGLSLILFGLTQEEFLNRLMIHGSASTVDSLCHLNGWGRCSIPIHALEAGIENRQ
LDTVNFFLKSKENLLNPSPKSSVPDQFDQFPSHLYLRNVEELTPALDLLCSAIRESDSET
QSKNFSEQLLNLTLSFLNKQIRELFIHNEELDEHLQKGVNILTSYINELRTFMIKFPWKL
TDTVDEYDVNENVPKVKESNMWEKLSIEEVIANAILNNKIPEAQTFFRINSHSAQRLEEL
IRIGLDLVFDNLKKNNVKEASELLKNMGFDVKDQLLKICFYTTDKNIRDFLVEILKEKNY
FSEKEKRTIDFVHQVEKFYSEHLQGNMQIQSFPRYWIKEQDFFKHKSALDSFLKCDYKDK
FDKQNHRIALNWAQWWNQLTQESILLPRINPEEYKLYSPEALWTYLTARHDWLSIISWIR
EFQTQNSYSSLQQNKWPPLTVDVIDQNTCCNNNMRNKIIDELARNGIFLISELEDFELFL
LRLNRIGGVMQDTLPVQNYRSKEGWDFHSHFILYCLEHSLQYLLYVYLDYYKLSPPNCPF
LDKKELHEAHPWFEFLVQCRQVSSNFTDPKLIFQASLANAQILIPSNQASVSSMLLEGHT
LLALATTMFAPGGVSLVVQNEENENCLKKVDPQLLKMALTPYPKLKSALFPQCTAPSVLP
PDITLYHLIQSLLPFDPSRLFGWQSANTLAIGDASSHLPHFSSPDLVNKYAIVERLNFAY
YLYHGRPSFAFGTFLVQELIKSKTPKQLIQQVGNEAYVLGLSSFHIPSIGAACVCFLELL
GLDSLKLRVDMKVANIILSYRCTNEDAQYSFIRESLAEKLSKLAEGEKAATEELLVLLEE
GTWNSIQQQEVKRLSNESSNHWALVVQFCRLHNVKLSTSYLKECAKANDWLQFIVHSQLH
NYHPEEVKPLLQYFSPVLQDHLRLAFENLPSESNSRMDSDQVRNKFPRELQGHKEEIIDF
FEILLRCSEQLNSRCWLLAEAVKQQAPVLSVLASCLQDASAIPCLCVWIITSVEDSVAAE
AMGHIQGSMEGHTWDLEDLSVIWRTLLTRQKSKTLIRGFQLFFKDSPLLLMLEMYELCMF
FKNYKEAEAKLLEFQKSLETLETAAIKLHAVIPVPWLKEQVCFLLKLMLQKCGTQYELGK
LLQLFVGIEHLFSDGPDVKKLCVLSQVLKDTSIAINHVIITSYSLENFQRECRSILEKLE
TTGQFASARKVAEIAELPVDNLVIEEITQEMQTLKHIDQWSLKQARIDFWKKCHENFKKN
SISSKAASSFFSAQALVACEYPNEEEQSNTEERHLLLTLAGHWLAQEDVVPVEKLEELEK
QIWLCRITQHTLRGNQEQIEPRSSQQISTSSELPFDNLASEFSFSKLAALNTSKYLELNG
FPSKETCENRLDWKKQESLNFLIGRLLDDGCVHEASRVCRYFHFYSQDVALVLHCRALAS
GEASVDDLHPEIHALLQSAELLEEEKEPRIPLRKVPSTSSLDSQSFVMLPPNDEMVTNLE
ILTSRCLHGKNYCRRVLCLYELSKELGCSYTDVATQDGETMLRAILASQRPDRCKRAQAF
ISTQGLEPERVAELVAEEVTRELLSPSEGTGRKQMVAPAEESQTFLQLTTLCQDHTLVGM
KLLEKISSVPHGELSCTTELLILAHHCFTLTCHMEGIIRVLQAARLLTDNHLAPKEEYGL
VVRLLTGIGRYNEMTYIFELLHKKHYFEVLMRKKLDPSGTLKTALLDYIKRCRPGDSEKH
NMIALCFSMCREIGENHEAAACIQLKLIESQPWEDSLKDGHQLKQLLLKALTLMLDAAES
YAKDSCVRQALHCRRLTKLLTLQIHFLNTGQNTMLINLGRHRLMDCIMSLPRFYQASIVA
EAYDFVPDWAEILYQQVILKGDFNYLEDFKQQRLLRTSIFEEISEKVRQRQPTEMAMKNL
KKLLTCCEDVYLYYKLAYEHEFYDVVKMLLKDPQTGCYLKDMLAS
NT seq
7338 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgaagtggcccggaagtgctgccgccggtggcagctgtaatgctgaagac
atggagcgggttctccatatgttgttgctgccggtccccgccgaggcaacggggcggctg
ggaacccgggcgcagttgcacagagagcaggaggttctggggagcctgaccgctgcaggc
agccttcaagtgctttctttggcgccagccggccggggcgggggtggctgctccctcgac
ggcccctttcggcagtttgtgtgggaggattctcataacagcagcacaccaacagagagg
cccaggctgctcgctcttagtgaaagttatgaactgctcatctatgaatttaacttgaaa
gatggaagatgtgatggaaccattgtgtataaatatagtgaggaaatgttgcaaaagctc
atcaaagatcaaaatatcagtatttccctattatctttgagaattctgtcatttcacaat
aacacatcattattgttcatcaacaaatgtatcatcctacacatcatgtttcctgaaaaa
gatgctgagactacagtactcaaatatttcacattacccttgcctgcccaggcagtggac
aatattgtcgacacgcagctctgcaaaggaattctttttgttttgagtagtttaggctgg
atctacatttttgatactgtcgatggtacacatgtagctcatgtggatttagcacttcac
caagaagatatgtgtaatgagcagcaacaggaaccagccaagatttcttcctttacttca
ctgaaagtgtctcaagacctagatgttgcagtgattaccagctctttcaactctgcgatt
gctcttaacttaaatttgtatttcaggcaacacccaggacacctactttgtgaaaaaatt
ctggaagacatgcctattgaaggccctaaggggatagatgaagacgatcctgttaattct
gactacaacatgaaactgaccaagttttccttccaagttgataggtcttggaaagcccag
ctattatcactgaatgaaaccataaagagctccaaacgggaggtttcccattatgcacca
tggttccagaatattttgcatctggagtcccctaaatctaataacctctgtaccagtgtg
ccagtttgggccttcattccacaggacataatgcacagtcagtataatttttcacagaaa
gataatgccaagaccagtgatccaggaagagcatggaaaagaatgtacatcagtgaacat
gaggaacctattgagcttagatgtgtgtctgtgacaggattcactgcactgtttacttgg
gcagtggaaaggacgggctgcaccattgtcctctgggatttggagactgagggcatgcag
tgcttttgccttggcaaaaaatgtattcctatagacagtagtggagaccagcagctgtgc
cttgctttgacagaaaatggactctctctgattttgtttggtttgactcaagaggagttt
ttaaatagactaatgatccatggaagtgccagcactgtggactctctttgccatctcaat
ggttgggggagatgctcaatccccatacatgcactagaggccgggatagaaaatcgtcag
ctggatacagtaaatttctttttgaagagcaaggaaaatcttttgaatccatccccaaaa
tcttctgtacctgatcaatttgatcagtttccatcccatttatatttaagaaatgtggaa
gagttgacaccagcattggatttgctttgctcagcaattagagaaagtgattctgaaacc
caaagcaaaaacttctcagaacaattacttaatcttacactgtccttccttaacaaacaa
ataagggagctttttattcacaatgaagagttagatgaacatctacagaaaggagtgaac
attttgaccagctacattaatgagcttcgaacgttcatgataaagtttccttggaagcta
acagatactgtagatgaatatgatgtaaatgaaaatgtccccaaagtaaaggagagcaat
atgtgggagaaactcagcattgaggaagttattgccaatgccattttaaacaacaaaata
ccagaggcacaaactttcttcaggattaatagtcattctgctcaaagacttgaagagctc
attagaataggcctagatttggtctttgacaatttgaaaaagaacaatgtaaaggaagcc
tccgaacttttaaagaatatgggctttgatgtaaaagaccagttgctcaagatatgcttc
tatacaactgataaaaatatacgggactttttggttgaaattttaaaagaaaaaaattat
ttttctgaaaaagagaaaagaactatagacttcgtgcatcaagttgagaagttttattca
gaacatttgcaaggaaatatgcagatccagtcctttcccaggtactggataaaggaacaa
gattttttcaagcacaaatctgctttggactcattcctgaaatgtgattataaagataaa
tttgacaaacagaaccatagaattgcattaaattgggctcagtggtggaatcaactaaca
caagaatctatccttcttcccaggataaatccagaagaatataaattgtattctcccgaa
gccctctggacatacctcacagctcgccatgattggctaagcattatctcatggattaga
gaatttcaaacccagaatagttattcttcacttcagcagaacaaatggcctcctctgact
gttgatgttatcgatcagaatacctgctgcaacaacaacatgcggaacaaaattatagat
gagctggccaggaatgggatttttcttatatctgaactagaagactttgaactcttcctc
ctaagactgaaccgtattgggggtgtgatgcaagatacccttcctgttcaaaactacaga
tccaaagaaggttgggatttccattctcacttcattctctattgtttggagcacagcctg
cagtatcttctttatgtctatctcgactattataagcttagtcctccaaactgtcccttt
ttggacaaaaaagaattacatgaagctcacccttggtttgaatttttagttcagtgtcga
caagtttccagtaacttcacagatcctaaactgatcttccaggctagccttgcaaacgca
caaatactgattcccagcaaccaggccagtgtaagcagtatgctgttggaaggacatact
ctcctggctcttgccaccacaatgtttgctcctggaggtgtcagcctggttgtccagaat
gaagaaaatgagaactgtttgaagaaagtggatccccagctactgaagatggccttaact
ccttatcccaagctaaaaagtgctctcttcccacagtgcactgcccctagtgtcctgcca
cctgacattacactctaccaccttattcagtcactattgccctttgatccaagcagattg
tttggctggcagtctgccaacacactagctataggagatgcatctagtcatctcccacat
ttctctagccctgacctggtaaataaatatgctatagttgaacgtctgaattttgcttat
tatttatatcatggacggccatcatttgcatttggtacttttctggtccaagagttaatt
aagagcaagacacccaagcaactgatccagcaagtaggcaatgaagcctatgttttaggc
ctctcttccttccacataccttcaataggagctgcctgtgtttgcttcttagaattgctt
ggcctcgacagcctcaagctcagagttgatatgaaagtggccaatataattctgagctac
agatgtacaaatgaagatgctcagtacagcttcatcagggagtctctggctgaaaaacta
tctaaactggcagaaggtgaaaaggcagctacagaagaattgctcgttctcttagaagaa
ggtacatggaacagcattcagcaacaggaagtaaagaggttgtccaatgaatctagcaac
cattgggcattagtggtacagttctgcaggctccacaatgtgaaactgagcacatcttac
cttaaagaatgtgccaaagccaatgattggttacagttcattgttcacagccagctccat
aattaccacccagaggaggtgaaacctcttctccagtattttagccctgtccttcaagac
cacttaaggctagcttttgagaacttgccctcagagtccaactccagaatggacagtgat
caagtacgcaacaagttcccccgggaactccagggacacaaagaagagataatcgatttc
tttgaaattctgctccggtgctcagagcagctaaactccaggtgctggcttctggctgaa
gcagtgaaacaacaggcccctgttcttagtgtcctagcctcatgtctccaggatgccagt
gctattccttgtctctgtgtttggatcatcacttctgtggaagacagtgttgcagctgaa
gcaatgggacacattcagggctctatggagggccacacctgggacctcgaggacctctca
gtcatctggagaacattattaacaaggcagaagagcaaaactctcatcagaggtttccaa
cttttctttaaggattccccattactattgatgttggaaatgtatgaactctgtatgttc
ttcaagaattataaggaagccgaagctaaactactggagttccagaagagcctcgaaact
cttgaaacagcagccataaagctgcatgctgtcatccctgttccatggctgaaggagcag
gtgtgttttcttttgaagcttatgctgcaaaagtgtgggacccagtatgagctggggaag
cttttacagctgtttgttggcatagagcatctcttctctgatggtccagatgtgaagaag
ctgtgtgtcctcagccaagttttgaaggatacatccatagctattaatcatgtaattatt
accagctatagccttgagaattttcagcgtgaatgtagatctattttggaaaaactggag
acaactggacagtttgcttcggctagaaaggtagcagaaatagctgagttacctgtggac
aacttggttattgaggagataacacaagaaatgcagaccttaaaacacattgaccagtgg
tccctgaaacaagcaagaattgacttctggaaaaaatgccatgagaattttaagaaaaat
tccatttcaagcaaagcagcctcttcctttttctcagcacaggcccttgtggcatgtgag
tacccaaatgaggaggaacagagcaacactgaagaaaggcatctgctgctcacactggcg
ggacactggcttgctcaggaggacgtggtgcctgtggagaagctggaggagctggagaag
cagatctggctctgccgtatcacccagcacaccctcagaggaaaccaggagcaaatagag
cccagatcttctcaacagatctcaactagtagtgaacttccctttgataacttagccagt
gagttttcattctcaaagttggctgctctgaacacatcaaaatacttagaacttaatggt
tttccatccaaagagacttgtgagaacagactagattggaagaagcaggagtcactgaac
tttttgattgggcgcctattggatgatggctgtgtgcatgaagcaagtagagtgtgccgg
tattttcatttctatagccaagatgttgccttggtactgcactgcagagcactggcttcc
ggggaagcgagtgtggatgacctacatccagagatccatgctctcctacaaagtgctgag
ctgctggaggaagaaaaagaacctcgcattcctctaaggaaagtcccaagcacttcaagt
ttggatagtcaatcatttgtgatgctgccccctaatgatgaaatggtaactaatcttgaa
attctgacaagcagatgcctccatgggaaaaactactgccggcgagtcctctgtctgtat
gaactttccaaggagctgggctgttcctacacagatgttgccacccaagatggtgagacc
atgctccgagcaatcttggcctctcagcggcccgatcgatgcaagcgagcccaagccttc
atcagcacccagggccttgagccagagagggtggctgaactcgtggctgaagaggtgacc
cgggagctgctgtccccatcagagggaacaggacgtaagcagatggttgccccagcagag
gaaagccagacatttcttcagctgaccactttgtgtcaagaccacaccttggtaggcatg
aagttgttggaaaagatttcctccgttccccatggggaactgtcttgcaccacagagctg
ctgattctggcccaccactgcttcacgctgacatgccacatggagggcatcatccgagtt
ctgcaggctgcccggctgctcacggacaaccacctggcccccaaggaggagtatgggctg
gtggtgcgtctcctcactggcattggaaggtacaatgagatgacatacatatttgaattg
ctgcacaaaaagcactactttgaagtgctgatgcggaagaagttggatccgagcggtacc
ctgaagacggccctactcgactacatcaaacgctgccgccctggggacagcgagaagcac
aacatgattgccctgtgcttcagcatgtgcagggagatcggggagaaccatgaggcagct
gcctgcatccaactgaaactgattgagtctcagccctgggaggacagcctcaaggatggg
caccaactgaagcagctgctgctgaaggccctgactctgatgctggatgcagcagagagt
tatgccaaggactcctgtgtgcgacaggccctgcactgtcgccggctcaccaagttgctg
acactgcagattcactttttgaacacaggccagaacaccatgcttatcaacctaggccgc
cataggctgatggactgcatcatgtccctacctcggttctaccaggcttctattgtggct
gaggcctatgactttgttcctgattgggctgaaattctataccaacaagtgattcttaaa
ggagactttaattacttggaagactttaagcagcaaagattattaagaaccagtatattt
gaagagatttccgaaaaagttagacaacgtcagcctaccgagatggctatgaaaaatctg
aagaagttactcacatgttgtgaagatgtctacttgtattacaagctggcatatgaacac
gaattttatgacgttgtaaagatgcttttgaaggaccctcagacaggttgctatctaaag
gacatgctagcaagttag
DBGET
integrated database retrieval system
