Pteronotus mesoamericanus (Parnell's mustached bat): 129064996
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Entry
129064996 CDS
T09558
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Pathway
ppam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129064996 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppam03019
]
129064996 (XAB2)
03041 Spliceosome [BR:
ppam03041
]
129064996 (XAB2)
Messenger RNA biogenesis [BR:
ppam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
129064996 (XAB2)
Spliceosome [BR:
ppam03041
]
Complex B
Other components
Prp19-related factors
129064996 (XAB2)
Complex C
129064996 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
TPR_12
TPR_2
TPR_8
Suf
TPR_19
ARM_TT21
TPR_15
ARM_TT21_C
RPN7
TPR_1
TPR_NPHP3
DHR-2_Lobe_A
Motif
Other DBs
NCBI-GeneID:
129064996
NCBI-ProteinID:
XP_054422238
LinkDB
All DBs
Position
Unknown
AA seq
853 aa
AA seq
DB search
MVVMARLSRQERPDLVFDEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERA
LKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFL
MDQGRITHTRRTFDRALRALPITQHSRIWPLCLRFLRSHPLPETAVRGYRRFLKLSPESA
EEYIEYLRSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNV
DAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYA
QFEESMIAAQMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEW
HKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEK
ATRVSFKQVDELASVWCECGELELRHENYDQALRLLRKATALPARRAEYFDGSEPVQNRV
YKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKA
YERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYA
QLEEEWGLARHAMAVYERATQAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLS
DEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTI
REMLRIRRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGLDDMKLLEQRAEQLA
AEAEHDQPARAQSKILFVRSDASREELAELAQQANPEEIELGEDEDEGDLEPSEVQLEQQ
SVPAAVFGSLKED
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggtggtcatggcgcgactttcgcggcaggagcggccggaccttgtctttgatgaagaa
gacctgccctatgaggaggaaatcatgcgaaaccagttctccgtcaaatgctggctccgc
tacattgagttcaaacagggagccccgaagcccaggctcaatcagctgtacgagcgagcc
ctgaagctgttgccctgcagctacaaactctggtaccgctatctgaaggcacgccgggcc
caggtgaagcatcgctgtgttaccgaccctgcctatgaagacgtcaacaactgccacgag
agggcctttgtgttcatgcacaagatgccgcggctgtggctggattattgccagttcttg
atggaccagggccgcatcactcacacccgccgcactttcgaccgcgccctccgggcgctg
cccatcacgcagcactctcgcatttggcctctgtgcctgcgcttcctgcgctcacacccg
cttcccgagacagccgtgcggggctaccggcgcttcctcaagctgagccctgagagtgcg
gaggagtacatcgagtacctcaggtccagcgaccggctggacgaggctgcacagcgcctg
gccaccgtggtcaatgacgagcgcttcgtgtccaaggctggcaagtccaactatcagctg
tggcacgagctctgtgacctcatctcccagaacccagacaaggtgcagtcgctgaatgtg
gacgccatcatccgaggaggcctcacccgcttcaccgaccagctgggcaagctctggtgc
tcgctggccgactactacatccgcagcggccactttgagaaggctcgggacgtgtacgag
gaagctatccggacggtgatgaccgtgcgggacttcacccaggtgttcgacagctacgcc
cagtttgaggagagcatgatcgcagctcagatggagaccgcctccgagctggggcgggag
gaggaggatgacgtggacttggagttgcgcctggcccgctttgagcagctcatcagccgg
cggcctctgctcctcaatagtgtcctgctgcgccagaacccgcaccacgtgcacgagtgg
cacaagcgcgtggccctgcaccagggccgaccccgggagatcatcaacacgtacacggag
gccgtgcagacggtggaccccttcaaggctacgggcaaaccccacacactgtgggtcgca
tttgccaagttttatgaggacaacgggcagctggatgatgcccgcgtcatcctggagaag
gccaccagggtgagcttcaagcaggtggacgagctggcaagcgtgtggtgcgagtgcggc
gagctggagctccggcacgagaactacgaccaggccctgcggctgctgcggaaggcaaca
gcgctgcccgcccgccgggctgaatacttcgatggctcagagcctgttcagaaccgtgtg
tacaagtccctaaaggtatggtccatgctcgccgacctggaggagagccttggcaccttc
cagtccaccaaggccgtgtacgaccgcatcctggacctgcgcatcgccaccccccagatc
gtcatcaactacgccatgttcctggaggagcacaagtactttgaggagagcttcaaggcg
tatgagcgtggcatctcactgttcaagtggcccaatgtgtccgacatctggagcacctat
ctgaccaaattcatcgcccgctacgggggccgcaagttggagcgggcacgggacctcttt
gagcaggcactggatggctgccccccaaaatatgcaaagaccctgtacctgctgtacgca
cagctggaggaggagtggggcctggcccggcacgccatggccgtgtacgagcgcgccacc
caggccgtggagcctgcccagcagtacgacatgttcaacatctacatcaagcgggctgcg
gagatctatggagtcacccacacccgcggcatctaccagaaggccatcgaggtgctgtca
gacgagcacgcccgggagatgtgcctgcgttttgcggacatggagtgcaagctgggggag
attgaccgcgcccgggccatctacagcttctgctcccagatctgtgacccccggacgacc
ggtgccttctggcaaacgtggaaggactttgaggtgcggcatggcaacgaggacaccatc
cgggagatgctgcggatccgccgaagcgtgcaggccacatacaacacgcaggtcaacttc
atggcctctcagatgctcaaggtgtcgggcagcgccacaggcactgtgtccgacctggcc
cctgggcagagtggcctggatgacatgaagctgcttgagcagcgggcagagcagctggcg
gccgaggccgagcacgaccagcccgcacgggcccagagcaagatcctgttcgtgaggagc
gatgcgtcccgggaggagctggccgagctggcccagcaggccaaccccgaggagattgag
ctgggcgaggacgaggacgagggggacctggagcccagcgaggtgcagctggagcagcag
agcgtgccggcggctgtgtttgggagcctgaaagaagactga
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integrated database retrieval system
