Pteronotus mesoamericanus (Parnell's mustached bat): 129065378
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Entry
129065378 CDS
T09558
Symbol
PABPC5
Name
(RefSeq) polyadenylate-binding protein 5
KO
K13126
polyadenylate-binding protein
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Pathway
ppam03015
mRNA surveillance pathway
ppam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129065378 (PABPC5)
09123 Folding, sorting and degradation
03018 RNA degradation
129065378 (PABPC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppam03019
]
129065378 (PABPC5)
03041 Spliceosome [BR:
ppam03041
]
129065378 (PABPC5)
Messenger RNA biogenesis [BR:
ppam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
129065378 (PABPC5)
mRNA cycle factors
Stress granule specific factors
129065378 (PABPC5)
Spliceosome [BR:
ppam03041
]
Complex C
Other components
Complex C specific factors
129065378 (PABPC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
RRM_7
RRM_3
TC1
Motif
Other DBs
NCBI-GeneID:
129065378
NCBI-ProteinID:
XP_054422606
LinkDB
All DBs
Position
Unknown
AA seq
382 aa
AA seq
DB search
MGSGEPNPAGKKKKYLKAALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPETRSPLG
YGYVNFRFPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNR
ALFYLFSAFGNILSCKVVCDDNGSKGYAYVHFESLAAANRAIWHMNGVRLNNRQVYVGRF
KFPEERAAEVRTRDRATFTNVFVKNFGDEMDDEKLKGIFSEYGPTESVKVIRDASGKSKG
FGFVRYETHEAAQKAVLDLHGKALDGKVLYVGRAQKKIERLAELRRRFERLRVKEKSRPP
GVPVYIKNLDETIDDEKLKEEFSAFGSISRAKVMVEVGQGKGFGVVCFSSFEEATRAVDE
MNGRVLGSRPLHVTLGQARGRW
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcggggagcccaatcctgctggcaagaaaaagaaatacctcaaggccgccttg
tacgtgggtgacttggacccagatgtcaccgaggacatgctctataaaaagttcaggccc
gctggccctctgcgcttcaccagaatctgccgtgaccccgagacccgcagtcccctgggc
tacggctatgtcaacttccgctttcctgccgacgccgagtgggccctgaacaccatgaat
ttcgatctgatcaacggcaaaccattccgcctcatgtggtcacagcctgatgaccgccta
aggaagtctggggttggaaatatcttcatcaaaaacctggacaaatccatagacaatcgg
gcccttttctatttgttttctgccttcgggaacattctctcctgcaaggttgtgtgcgac
gacaacggctcgaagggctacgcctacgtgcacttcgagagcctggcggccgccaacaga
gccatctggcacatgaacggcgtgcggctcaacaaccgccaggtctacgtgggccgcttc
aaatttcccgaggagcgcgccgccgaggtgcgcaccagggacagagcgaccttcaccaac
gtcttcgtgaagaacttcggcgatgaaatggacgacgagaaactgaagggcattttcagc
gagtacgggcccaccgagagcgtcaaggtcatccgagacgccagcggcaagtccaagggc
ttcggcttcgtgcgctacgagacgcacgaggcggcgcagaaggcggtgctggacctgcac
ggcaaggccctggacggcaaggtcctgtacgtcggccgggcccagaagaagatcgagcgg
ctggccgagctccggcggcggttcgagcggctgcgcgtcaaggaaaagagccgccccccc
ggggtgcccgtctatatcaaaaacctggatgagaccatcgatgatgagaagctgaaggag
gagttctccgccttcggatccattagccgcgccaaagtgatggtggaggtcgggcaaggc
aaagggttcggggtcgtgtgcttctcctcttttgaagaagccaccagagcggtggacgag
atgaacgggcgcgtgctgggctccaggccgctgcacgtgaccttgggccaggccaggggc
aggtggtga
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