KEGG   Pteronotus mesoamericanus (Parnell's mustached bat): 129065450
Entry
129065450         CDS       T09558                                 
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
  KO
K12828  splicing factor 3B subunit 1
Organism
ppam  Pteronotus mesoamericanus (Parnell's mustached bat)
Pathway
ppam03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ppam00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129065450
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ppam03041]
    129065450
   03036 Chromosome and associated proteins [BR:ppam03036]
    129065450
Spliceosome [BR:ppam03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    129065450
 Complex B
    129065450
 Complex C
   U2 SnRNP specific factors
    129065450
Chromosome and associated proteins [BR:ppam03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    129065450
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_ECM29 Htt_N-HEAT_1 HEAT_2 XMAP215_CLASP_TOG Adaptin_N UNC45-central DUF2298 TALPID3
Other DBs
NCBI-GeneID: 129065450
NCBI-ProteinID: XP_054422666
LinkDB
Position
Unknown
AA seq 1304 aa
MAKIAKTHEDIEAQIREIQGKKAALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAA
TELEDDDDDYSSSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPPKIADREDEYK
KHRRTMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGE
LKVVNGAAASQPPSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDETPGRAK
GSETPGATPGSKIWDPTPSHTPAGAATPGRGDTPGHATPGHGGATSSARKNRWDETPKTE
RDTPGHGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTPVLTPGKTPI
GTPAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPAG
YVPIRTPARKLTATPTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLLV
DVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLM
SPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNL
AKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQA
RHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPYG
IESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSP
DEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQLVDTTVEL
ANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAF
QEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAV
VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRL
TPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNT
FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE
LNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVY
GFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARK
VRDVYWKIYNSIYIGSQDALIAHYPRIYNDDKNTYIRYELDYIL
NT seq 3915 nt   +upstreamnt  +downstreamnt
atggcgaagattgccaagactcacgaagatatcgaagcacagattcgagaaatccaaggc
aagaaggcagctcttgatgaagctcaaggagtgggccttgattctacaggttattatgac
caggaaatttatggtggaagtgacagcagatttgctggatatgtgacatcaattgctgca
actgaacttgaagatgatgacgatgactactcatcatctacaagtttgcttgggcagaag
aagccaggatatcatgcccctgtggcattgcttaatgatataccacagtcaacagaacag
tatgatccatttgctgagcaccgacctccgaagattgcagaccgggaagatgaatacaaa
aagcacaggcggaccatgataatttccccagagcgtcttgatccttttgcagatggaggg
aaaacccctgatcctaaaatgaatgctaggacttacatggatgtaatgcgagaacaacat
ttgactaaagaagagagagaaattaggcaacaactagcagaaaaagctaaagctggagaa
ttaaaagtcgtcaatggagcagcagcatcccagcctccctcaaaacgaaaacgacgctgg
gatcaaacagctgatcagactcctggtgccactcccaagaagctatcgagttgggatcaa
gcagagacccctggacatacaccttctttaagatgggatgagacaccaggtcgtgcaaag
ggaagtgagactcctggagcaaccccgggctcgaaaatatgggatcctacaccgagtcac
acaccagcgggagctgctactcctggacggggtgatacaccaggtcatgcgacaccaggc
catggaggtgcaacttccagcgctcgtaaaaacagatgggacgagacccccaaaacagaa
agagatactcctgggcatggaagtggatgggccgagacgcctcgaacagatagaggtgga
gattcaattggtgaaacacccactcctggagccagtaaaagaaagtcacgttgggatgaa
acaccagctagtcagatgggaggaagcactcctgttctgacccctggaaaaacaccaatt
ggcacaccagccatgaacatggccacccctactccaggtcacataatgagtatgactcct
gaacagcttcaggcttggcggtgggagagggaaattgatgagagaaatcgcccactttct
gatgaagagttagatgctatgttcccagaaggatataaggtactccctcctccagctggt
tatgttcctattcgaactccagctcgaaagctgacagcaactccaacacctttgggtggt
atgactggtttccacatgcaaactgaagatagaactatgaaaagtgttaatgaccaacca
tctggaaatcttccctttttaaaacctgacgatattcagtacttcgataaactcctggtt
gatgttgatgaatcaacacttagtccagaagaacaaaaagagagaaaaataatgaagttg
cttttaaaaattaagaatggaacacctccaatgagaaaggctgcattgcgtcagattact
gataaagctcgtgaatttggagctggtcctttgtttaaccagattcttcctctactgatg
tctcctacacttgaggatcaagaacgtcatttacttgtgaaagttattgatagaatatta
tacaaacttgatgacttagttcgaccatatgtgcacaagatccttgtggtgattgaacca
ttgttgattgatgaagattactatgctagagtggaaggcagagagattatttctaatttg
gcaaaggctgctggtctggctactatgatttctaccatgagacctgatatagataatatg
gatgaatatgttcgtaatacaacagccagagcttttgctgttgtagcttctgccctgggc
attccttcattattgcccttcttaaaggctgtttgtaaaagcaagaagtcctggcaagcc
aggcacactggtattaagattgtacaacagatagctattcttatgggctgtgccatcttg
ccacatctgagaagtttagttgaaatcattgaacatggtcttgtggatgagcagcagaaa
gttcggaccattagtgctttggccattgctgccttggctgaagcagcaactccttatggc
atcgaatcttttgattctgtgttaaagcctctatggaagggtatccgccagcacagagga
aagggtctggctgcctttttaaaggctattgggtatcttattcctctcatggatgcagaa
tatgccaactactatactagagaagtgatgttaatccttattagagaatttcaatctcct
gatgaagaaatgaagaaaattgtgctgaaggtggtaaagcagtgttgtggaacagatggt
gtagaagcaaactacattaaaacagagattcttcctcctttttttaaacacttttggcaa
cacagaatggctttagatagaagaaattaccgacagttagttgatactactgtggagttg
gcaaacaaagtaggtgcagcagaaattatatccaggattgtggatgatctgaaagatgaa
gctgaacagtacagaaaaatggtgatggaaacaatcgagaaaattatgggcaacttggga
gcagcagatattgatcataaacttgaagaacaattgattgatggtattctttatgctttc
caggaacagactacagaggactcagtaatgttgaatgggtttggcacagtggtcaatgct
cttggcaaacgggttaagccttacttgcctcagatctgtggtacagttttgtggcgttta
aataacaaatcagcaaaagttaggcaacaggcagctgacttgatctctcgtactgctgtt
gtcatgaagacttgtcaagaggaaaagttgatggggcacttgggtgttgttttgtatgag
tatttgggtgaagagtaccctgaagtattgggcagcatccttggagcactgaaggccatt
gtaaatgtaataggtatgcataagatgaccccaccaattaaagatctgctgcctagactc
actcctatcctaaagaacaggcatgaaaaagtacaggagaattgtattgatcttgttgga
cgtattgctgacaggggagctgaatatgtgtcagcaagggaatggatgaggatttgcttt
gaacttttggagctcttgaaagctcacaaaaaagctattcgtagagccacagtcaacaca
ttcggttatattgcaaaggccattggccctcatgatgtattggctacacttttaaacaac
ctcaaagttcaggaaaggcagaacagagtttgtaccactgtagcaatagctattgttgct
gaaacatgctcacccttcacagtactacctgccctaatgaatgaatacagagttcctgaa
ctaaatgttcaaaatggagtgttaaaatcactttccttcttgtttgaatatattggtgaa
atggggaaggactacatttacgctgtcacaccattacttgaggatgctttaatggatagg
gaccttgtacacagacagaccgctagtgcagttgtacaacacatgtcacttggggtttat
ggatttggttgtgaagattcactgaatcacttgttgaactatgtatggcccaatgtgttt
gagacatcgccccatgtaattcaggccgttatgggagccctggagggcttgagagtcgct
attggaccatgtagaatgttacagtattgtttacagggtttgtttcacccagcccggaag
gtcagagatgtgtattggaaaatttacaactccatctacattggttcacaggatgctctc
atagcacattacccaagaatctacaatgatgataagaatacctatattcgttacgaactt
gactatatcttataa

DBGET integrated database retrieval system