Pteronotus mesoamericanus (Parnell's mustached bat): 129065451
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Entry
129065451 CDS
T09558
Symbol
SF3B1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Pathway
ppam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129065451 (SF3B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppam03041
]
129065451 (SF3B1)
03036 Chromosome and associated proteins [BR:
ppam03036
]
129065451 (SF3B1)
Spliceosome [BR:
ppam03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
129065451 (SF3B1)
Complex B
129065451 (SF3B1)
Complex C
U2 SnRNP specific factors
129065451 (SF3B1)
Chromosome and associated proteins [BR:
ppam03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
129065451 (SF3B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
Adaptin_N
UNC45-central
DUF2298
TALPID3
Motif
Other DBs
NCBI-GeneID:
129065451
NCBI-ProteinID:
XP_054422668
LinkDB
All DBs
Position
Unknown
AA seq
1304 aa
AA seq
DB search
MAKIAKTHEDIEAQIREIQGKKAALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAA
TELEDDDDDYSSSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPPKIADREDEYK
KHRRTMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGE
LKVVNGAAASQPPSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDETPGRAK
GSETPGATPGSKIWDPTPSHTPAGAATPGRGDTPGHATPGHGGATSSARKNRWDETPKTE
RDTPGHGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTPVLTPGKTPI
GTPAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPAG
YVPIRTPARKLTATPTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLLV
DVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLM
SPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNL
AKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQA
RHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPYG
IESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSP
DEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQLVDTTVEL
ANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAF
QEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAV
VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRL
TPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNT
FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE
LNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVY
GFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARK
VRDVYWKIYNSIYIGSQDALIAHYPRIYNDDKNTYIRYELDYIL
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagattgccaagactcacgaagatatcgaagcacagattcgagaaatccaaggc
aagaaggcagctcttgatgaagctcaaggagtgggccttgattctacaggttattatgac
caggaaatttatggtggaagtgacagcagatttgctggatatgtgacatcaattgctgca
actgaacttgaagatgatgacgatgactactcatcatctacaagtttgcttgggcagaag
aagccaggatatcatgcccctgtggcattgcttaatgatataccacagtcaacagaacag
tatgatccatttgctgagcaccgacctccgaagattgcagaccgggaagatgaatacaaa
aagcacaggcggaccatgataatttccccagagcgtcttgatccttttgcagatggaggg
aaaacccctgatcctaaaatgaatgctaggacttacatggatgtaatgcgagaacaacat
ttgactaaagaagagagagaaattaggcaacaactagcagaaaaagctaaagctggagaa
ttaaaagtcgtcaatggagcagcagcatcccagcctccctcaaaacgaaaacgacgctgg
gatcaaacagctgatcagactcctggtgccactcccaagaagctatcgagttgggatcaa
gcagagacccctggacatacaccttctttaagatgggatgagacaccaggtcgtgcaaag
ggaagtgagactcctggagcaaccccgggctcgaaaatatgggatcctacaccgagtcac
acaccagcgggagctgctactcctggacggggtgatacaccaggtcatgcgacaccaggc
catggaggtgcaacttccagcgctcgtaaaaacagatgggacgagacccccaaaacagaa
agagatactcctgggcatggaagtggatgggccgagacacctcgaacagatagaggtgga
gattcaattggtgaaacacccactcctggagccagtaaaagaaagtcacgttgggatgaa
acaccagctagtcagatgggaggaagcactcctgttctgacccctggaaaaacaccaatt
ggcacaccagccatgaacatggccacccctactccaggtcacataatgagtatgactcct
gaacagcttcaggcttggcggtgggagagggaaattgatgagagaaatcgcccactttct
gatgaagagttagatgctatgttcccagaaggatataaggtactccctcctccagctggt
tatgttcctattcgaactccagctcgaaagctgacagcaactccaacacctttgggtggt
atgactggtttccacatgcaaactgaagatagaactatgaaaagtgttaatgaccaacca
tctggaaatcttccctttttaaaacctgacgatattcagtacttcgataaactcctggtt
gatgttgatgaatcaacacttagtccagaagaacaaaaagagagaaaaataatgaagttg
cttttaaaaattaagaatggaacacctccaatgagaaaggctgcattgcgtcagattact
gataaagctcgtgaatttggagctggtcctttgtttaaccagattcttcctctactgatg
tctcctacacttgaggatcaagaacgtcatttacttgtgaaagttattgatagaatatta
tacaaacttgatgacttagttcgaccatatgtgcacaagatccttgtggtgattgaacca
ttgttgattgatgaagattactatgctagagtggaaggcagagagattatttctaatttg
gcaaaggctgctggtctggctactatgatttctaccatgagacctgatatagataatatg
gatgaatatgttcgtaatacaacagccagagcttttgctgttgtagcttctgccctgggc
attccttcattattgcccttcttaaaggctgtttgtaaaagcaagaagtcctggcaagcc
aggcacactggtattaagattgtacaacagatagctattcttatgggctgtgccatcttg
ccacatctgagaagtttagttgaaatcattgaacatggtcttgtggatgagcagcagaaa
gttcggaccattagtgctttggccattgctgccttggctgaagcagcaactccttatggc
atcgaatcttttgattctgtgttaaagcctctatggaagggtatccgccagcacagagga
aagggtctggctgcctttttaaaggctattgggtatcttattcctctcatggatgcagaa
tatgccaactactatactagagaagtgatgttaatccttattagagaatttcaatctcct
gatgaagaaatgaagaaaattgtgctgaaggtggtaaagcagtgttgtggaacagatggt
gtagaagcaaactacattaaaacagagattcttcctcctttttttaaacacttttggcaa
cacagaatggctttagatagaagaaattaccgacagttagttgatactactgtggagttg
gcaaacaaagtaggtgcagcagaaattatatccaggattgtggatgatctgaaagatgaa
gctgaacagtacagaaaaatggtgatggaaacaatcgagaaaattatgggcaacttggga
gcagcagatattgatcataaacttgaagaacaattgattgatggtattctttatgctttc
caggaacagactacagaggactcagtaatgttgaatgggtttggcacagtggtcaatgct
cttggcaaacgggttaagccttacttgcctcagatctgtggtacagttttgtggcgttta
aataacaaatcagcaaaagttaggcaacaggcagctgacttgatctctcgtactgctgtt
gtcatgaagacttgtcaagaggaaaagttgatggggcacttgggtgttgttttgtatgag
tatttgggtgaagagtaccctgaagtattgggcagcatccttggagcactgaaggccatt
gtaaatgtaataggtatgcataagatgaccccaccaattaaagatctgctgcctagactc
actcctatcctaaagaacaggcatgaaaaagtacaggagaattgtattgatcttgttgga
cgtattgctgacaggggagctgaatatgtgtcagcaagggaatggatgaggatttgcttt
gaacttttggagctcttgaaagctcacaaaaaagctattcgtagagccacagtcaacaca
ttcggttatattgcaaaggccattggccctcatgatgtattggctacacttttaaacaac
ctcaaagttcaggaaaggcagaacagagtttgtaccactgtagcaatagctattgttgct
gaaacatgctcacccttcacagtactacctgccctaatgaatgaatacagagttcctgaa
ctaaatgttcaaaatggagtgttaaaatcactttccttcttgtttgaatatattggtgaa
atggggaaggactacatttacgctgtcacaccattacttgaggatgctttaatggatagg
gaccttgtacacagacagaccgctagtgcagttgtacaacacatgtcacttggggtttat
ggatttggttgtgaagattcactgaatcacttgttgaactatgtatggcccaatgtgttt
gagacatcgccccatgtaattcaggccgttatgggagccctggagggcttgagagtcgct
attggaccatgtagaatgttacagtattgtttacagggtttgtttcacccagcccggaag
gtcagagatgtgtattggaaaatttacaactccatctacattggttcacaggatgctctc
atagcacattacccaagaatctacaatgatgataagaatacctatattcgttacgaactt
gactatatcttataa
DBGET
integrated database retrieval system
