Pteronotus mesoamericanus (Parnell's mustached bat): 129065533
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Entry
129065533 CDS
T09558
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Pathway
ppam03020
RNA polymerase
ppam03420
Nucleotide excision repair
ppam05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
129065533 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
129065533 (POLR2B)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
129065533 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppam03021
]
129065533 (POLR2B)
03400 DNA repair and recombination proteins [BR:
ppam03400
]
129065533 (POLR2B)
Enzymes [BR:
ppam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
129065533 (POLR2B)
Transcription machinery [BR:
ppam03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
129065533 (POLR2B)
DNA repair and recombination proteins [BR:
ppam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
129065533 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
129065533
NCBI-ProteinID:
XP_054422759
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKEVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtatgacgcagacgaggatatgcaatatgatgaggatgatgatgaaatcacccctgat
ttgtggcaagaagcatgctggattgtaatcagttcctattttgacgagaaaggcttggtc
agacaacagctggattcttttgatgagtttattcagatgtctgttcaaagaattgtggaa
gatgctccacctatagacctacaggctgaagctcagcatgctagtggggaagttgaagaa
ccgccaagatatttgctgaagtttgaacaaatttatctctccaagcctacccactgggaa
agggatggtgctccgtcaccaatgatgccaaatgaggccagattaagaaatctcacgtat
tctgctccactttatgttgatataacaaaaacagttattaaagaaggtgaagagcagctt
cagactcagcatcagaaaacttttataggaaaaattccaattatgttgcgttcaacgtac
tgcctgttgaatggcttaacggatcgtgatctttgtgaattgaatgaatgccccttggat
cctggtggctatttcattattaatggatcagaaaaggttctgattgcccaagagaaaatg
gcaacaaacacagtctatgtgtttgccaaaaaggattctaaatatgcctacacaggagag
tgtagatcatgtctggagaattcttcccgacctaccagtacgatttgggttagcatgctg
gcaagaggaggacagggtgcaaagaagagtgctattggtcagcgcattgtggcaactcta
ccatatatcaagcaagaagttcccatcattattgtgttcagagcattaggttttgtgtct
gacagagatattttagagcatattatttatgattttgaagacccagagatgatggaaatg
gttaaaccttctcttgatgaagcatttgttatccaagaacagaatgttgcactaaatttc
attggctcaagaggggcaaagcctggtgtcactaaagagaaaagaattaaatatgcaaaa
gaagtcttacaaaaagaaatgcttcctcatgttggtgtcagtgatttttgtgagaccaaa
aaagcttatttcctggggtacatggttcataggttgctactagcagctttgggtagaaga
gaattagatgacagagatcactatggaaacaaaagattggatcttgctggaccgctactt
gcattcttatttagaggcatgtttaagaatttgctgaaagaagtgaggatctatgcacag
aagtttattgatcgagggaaggattttaacttggaattggcaattaaaacaagaattata
tctgatggcctaaaatattctttagctactggaaactggggtgaccaaaagaaagcccat
caggccagagctggagtatctcaggtattaaaccgcctgacttttgcatccactctttct
cacctgcgtcgtttaaattctcctattggtagagatggcaagttggctaaaccaagacag
ttgcataatacactgtggggaatggtgtgtcctgctgagaccccagagggccatgctgta
ggacttgtgaagaatttagccctgatggcctatatttcagttggatctcaaccttctcca
attctggaatttttagaagaatggagtatggaaaatttagaagaaatttctcctgcagct
attgctgatgcaaccaaaatttttgttaatggctgctgggttggaatacataaagatcct
gaacagcttatgaatactctgaggaaattacgacgtcagatggatatcattgtgtctgaa
gtctctatgatcagagatattcgagagagggagattcggatctacacagatgcaggccgt
atttgtagaccgcttctgattgtggaaaaacaaaagctgctgttaaagaagagacatatt
gatcaattgaaagaaagagaatataacaactacagttggcaggatcttgtagccagtggg
gtagtggaatatattgatactcttgaagaagaaacagtgatgcttgcaatgactccagat
gatttgcaggagaaagaagtggcttattgttccacgtatacacactgtgaaattcacccg
tcaatgattcttggtgtctgtgcatctattattccatttcctgatcataatcagtcccct
agaaacacgtaccagtctgctatgggtaagcaggctatgggagtttatatcaccaacttt
catgtgcgtatggatacactggctcatgtcctttattatcctcaaaaaccacttgtgacc
acgcggtctatggaatatctacggtttagagagctgccagcgggtatcaactcaattgtg
gccattgcatcatacactggatacaatcaagaggattctgttatcatgaatcgttctgct
gtagatcgaggctttttcaggtctgttttctatcgatcatacaaagaacaggagtctaaa
aaaggatttgatcaagaagaagtttttgagaagcctacacgtgaaacatgtcagggtatg
aggcatgccatttatgacaagctggatgatgatggcttgatagctcctggggttcgtgta
tcaggagatgatgttattataggcaaaacagtcaccttgcctgaaaatgaagatgaattg
gagagcactaatagacgctataccaagagagactgtagcacttttctcagaactagtgag
acaggcattgtggatcaggttatggtcactctcaaccaggaaggatataaattttgtaaa
ataagggtacgctctgttagaattccacagattggagacaaatttgccagtcgacatggt
caaaagggtacttgtggtattcaatatagacaagaggatatgccctttacctgtgaaggt
atcacccctgatatcatcataaatccccatgccatcccctctcgtatgactattggtcac
ttgattgaatgtcttcaagggaaggtttcagctaacaagggtgaaattggtgatgccact
ccatttaatgatgctgtgaacgtgcagaaaatttctaaccttttatctgattacggctac
catctcagaggaaatgaggtcctgtacaacggattcactggtagaaaaatcacatcacaa
attttcattggccccacttattaccagcgtttgaagcatatggtggacgacaagattcat
tctcgcgctaggggacctattcagattcttaatagacaacccatggagggtagatcccgt
gacggtggcctgcgttttggagaaatggaacgagattgtcagattgcccacggggcagcg
cagtttttaagggaaagattgtttgaggcatcagatccatatcaagttcatgtttgcaat
ctttgcggaataatggcgatcgctaacaccaggacccatacatatgaatgcaggggctgt
cgaaataaaacccagatttctttggtgcgaatgccttatgcgtgcaaactattatttcag
gagcttatgtctatgagtattgcacctagaatgatgagtgtttag
DBGET
integrated database retrieval system
