Pteronotus mesoamericanus (Parnell's mustached bat): 129065589
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Entry
129065589 CDS
T09558
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Pathway
ppam01524
Platinum drug resistance
ppam03430
Mismatch repair
ppam05200
Pathways in cancer
ppam05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
129065589 (MSH6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
129065589 (MSH6)
09162 Cancer: specific types
05210 Colorectal cancer
129065589 (MSH6)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
129065589 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppam03400
]
129065589 (MSH6)
DNA repair and recombination proteins [BR:
ppam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
129065589 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
WPP
HORMA
Motif
Other DBs
NCBI-GeneID:
129065589
NCBI-ProteinID:
XP_054422815
LinkDB
All DBs
Position
Unknown
AA seq
1361 aa
AA seq
DB search
MSRQSTLYSFFPKSPAALNNTNKARVKASGEGGAAAATRASSSPSGDAAWSEDGPGPGPL
ASSASPPEARDLNGGLQRSTAPAVPSSPCDFSPGDLVWAKMEGYPWWPCLVYNHPFDGTF
IREKGKSARVHVQFFDDSPTRGWVSRRLLKPYTGSKSKEAQKGGHFYSAKPEILRAMQRA
DEALNKDKVKRLELAVCDEPSEPEEEEMEVGATYASDKSEEDNEIESEEEVPPKVQGSRR
SSRQIKKRRVISDSESDIGGSDVEFKPDAKEEGSSDEISSGLGDSDSESLHSSVKVAPKR
KRMVTGNGSLKRKSSRKEIPPVTKRATGISSETKSALCAFSAPQNSESQAHISGGCDDSS
RPTVWYHETLEWLKEEKRRDVHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQN
FDLVIFYKVGKFYELYHMDALIGVNELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKV
ARVEQTETPEMMEARCRKMAHICKHDKVVRREICRIITKGTQTYSVLEGDPSENYSKYLL
SLKEKEDDTSGHTRVYGVCFVDASLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGN
LSTETKMILKGSLSSSLQEALIPGSQFWDAAKTLRTLLEEGYFTEKLNEDSGVMLPQVLK
GMTSESDSIGLTPGEKSELALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDMVNAT
RPGAVFSKANQRMVLDSVTLNNLEIFLNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLCA
PLCNPFAINDRLDAIEDLMVVPDKIPELADLLKKLPDLERLLSKIHNVGSPLKSQNHPDS
RAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEFIGDFKSKILKQVITLQTKNPDG
RFPNLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIKENEQSLLEYLEKQRS
RIGCRTIVYWGIGRNRYQLEIPENFITHNLPEEYELKSTKKGCKRYWTKTIEKKLANLIN
AEERRDVSLKDCMRRLFYNFDKNYKNWQAAVECIAVLDVLLCLANYSRGGDGPMCRPVIL
SPKEDTPVFLDLKGSRHPCITKTFFGDEFIPNDIVIGCEEEEEENGKAYCVLVTGPNMGG
KSTLMRQAGLLAVLAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETAS
ILTHATAHSLVLVDELGRGTATFDGTAIASAVVKELAENIKCRTLFSTHYHSLVEDYSQN
VAVRLGHMACMVENECEDPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRK
AREFEKITKSLRLFREVCLASERSTIDAEAVHKLLTMIEEL
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacagagcacgctgtacagcttcttccccaagtctccagcggcgctgaataat
accaacaaggcccgggtcaaggcctcaggtgaaggcggcgctgccgctgccaccagggcc
tcctcttcccccagcggggatgcggcctggagcgaggacgggcctgggcccgggcccttg
gcgagctccgcgtcgccccccgaggcgagggacctcaacggagggctacagaggtcgact
gcgcctgcggtcccctccagtccttgcgacttctcaccaggtgatttggtttgggccaag
atggagggttacccctggtggccttgcctggtttacaaccacccttttgatggaacattc
atccgtgagaaagggaagtctgcccgagttcatgtacaattttttgatgacagcccaaca
aggggctgggttagcagaaggctactaaagccatatacaggttcaaaatcaaaggaagcc
cagaaaggaggtcatttttacagtgcaaagcctgaaatactcagagcaatgcaacgtgca
gatgaagccttgaataaagacaaggttaagaggcttgaattggcagtgtgtgatgagccc
tcagagccagaggaggaagaaatggaggtaggtgcaacttatgcatcagataagagtgaa
gaagacaatgaaattgagagtgaagaggaagtgccacctaaggtgcaaggatctaggcga
agtagccgacaaattaaaaaacgaagagttatatcagactctgagagtgacatcggtggc
tctgatgtggaattcaagccagatgctaaggaagaaggaagcagtgatgaaataagcagt
ggattgggggatagtgacagtgaaagcctgcacagctctgtcaaagttgctccaaagcgg
aagagaatggtgactggaaatggttctctcaaaaggaaaagttcaaggaaggaaataccc
ccagtcaccaaacgagcaactggcatttcgtcggaaaccaagagtgctttgtgtgctttc
tctgcccctcaaaattctgaatcccaagcccacattagtggaggatgtgatgatagtagt
cgccccactgtctggtatcatgaaactttagaatggcttaaggaggaaaagagaagagat
gtgcacaggaggcgacctgatcatcctgattttgatgcatctacactctatgtgcctgag
gatttccttaattcctgtacccctgggatgaggaagtggtggcagattaagtctcagaac
tttgatcttgtcatattttataaggtggggaagttttatgagctgtaccacatggatgct
cttattggagtcaatgaactagggctggtattcatgaaaggcaactgggcacattctggt
ttccctgaaattgcatttggccgatactcagattctctggtccagaaaggctacaaagta
gcacgagtggaacagaccgagacgccagaaatgatggaggcaagatgccgaaagatggca
catatatgtaagcatgataaagtggtgaggagggagatttgtaggatcattactaagggt
acacagacatacagtgtgctggaaggtgacccgtctgagaactatagtaagtatcttctt
agcctcaaagaaaaagaggacgatacttctggccacactcgagtgtatggtgtatgcttt
gttgatgcctcactgggaaagtttttcataggtcagttttcagatgatcgccactgttcc
aggtttaggactctagtggcacattaccctccagtacaagtcttgtttgagaaaggaaat
ctctcaacagaaactaagatgattctgaagggttcattatcctcttctcttcaagaagct
ctaataccaggctcccagttttgggatgcagccaaaactttgagaactctccttgaagaa
ggatattttacagaaaagttaaatgaggatagtggggtgatgttaccccaggtgcttaag
ggtatgacttcagagtctgattctattgggttgacaccaggagagaagagtgaattggcc
ctctctgctctaggtggttgtgtcttctacctcaaaaaatgccttattgatcaggagctt
ttatcaatggctaattttgaagaatatatacccttggattcagacatggtcaatgctaca
cgacctggtgctgttttttctaaagccaatcaacgaatggtgcttgattctgtgacatta
aacaacttggagatttttctgaatggaacaaacggttctaccgaaggtaccctgctggaa
aagattgatacttgccatactccttttggtaagcggctcctaaagcaatggctatgtgcc
ccgctgtgtaacccttttgctatcaatgatcgtctggatgctattgaagacctaatggtt
gtgcctgacaaaatccctgagcttgcagaccttctaaagaagcttccagaccttgagaga
ctactgagtaaaattcataatgttggctctcccttgaagagccagaaccacccagatagt
agggctataatgtatgaagaaactacctacagcaaaaaaaagattattgattttctttct
gctctggaaggattcaaagtaatgtgtaaaattatagggattatggaagaattcattggt
gactttaagtctaaaatccttaagcaggtcattactctgcagacgaaaaatcctgatggc
cgttttccaaatttaactgtagaactgaaccgatgggatactgcctttgaccatgaaaag
gctcgaaagactggactgattactcccaaagcaggatttgactctgattatgaccaagct
cttgctgacataaaagaaaatgagcagagcctcttggaatacttggagaaacagcgcagt
agaattggctgtaggaccatagtctattggggaattggaaggaaccgttaccagctggaa
attccagagaatttcatcacccataatttgccagaagaatatgagttgaagtccaccaag
aagggctgtaaacgatactggaccaaaactattgagaagaagctggctaatctgataaat
gctgaagaacggagagatgtatcattgaaggattgcatgcggcgactattctataacttc
gataaaaattacaagaactggcaggctgctgtagagtgcattgcagtgttggatgtctta
ctgtgcttggctaactacagtcgagggggtgatggtcctatgtgtcgtccagtaattctg
tcaccaaaagaagacactcctgtcttcttagaccttaaaggatcacgccatccctgcatc
acaaagactttttttggagatgagtttattcccaatgacattgtaataggctgcgaggag
gaagaggaggaaaatggcaaagcttattgtgtgcttgttactggacctaatatggggggc
aagtctacactcatgagacaggctggcctgttggctgtattggcgcagatgggttgttat
gtacctgctgaagtgtgcaggctcacaccaattgatagagtgtttactagacttggtgcc
tcagacagaataatgtcaggcgaaagtacattttttgttgaattgagtgaaactgccagt
atacttacacatgcaacagcacattctctggtgcttgtggatgaattaggaagaggtaca
gcaacatttgatgggacagcaatagcaagtgcagttgttaaagaacttgctgagaatata
aagtgtcgtacattgttttctacccactaccattcattagttgaagattattctcaaaat
gttgcagtgcgcctaggacacatggcatgcatggtagaaaatgaatgtgaagatcccagt
caagagactattaccttcctttataaattcattaagggagcttgtcctaaaagttacggt
tttaatgcagcaaggcttgctaatcttccagaggaggttattcaaaagggacatagaaaa
gcaagagaatttgagaagataactaaatcactgcgattatttcgggaagtttgcctggct
agtgaaaggtcgactatagatgctgaagctgtccataagttgttgactatgattgaggaa
ttatag
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integrated database retrieval system
