KEGG   Pteronotus mesoamericanus (Parnell's mustached bat): 129065714
Entry
129065714         CDS       T09558                                 
Symbol
TDP1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
ppam  Pteronotus mesoamericanus (Parnell's mustached bat)
Pathway
ppam03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ppam00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    129065714 (TDP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppam03400]
    129065714 (TDP1)
DNA repair and recombination proteins [BR:ppam03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     129065714 (TDP1)
SSDB
Motif
Pfam: Tyr-DNA_phospho RMMBL
Other DBs
NCBI-GeneID: 129065714
NCBI-ProteinID: XP_054422953
LinkDB
Position
Unknown
AA seq 608 aa
MSQEGNYGRWTISSSDESEEEKPKLDNPSTSLLPHAGQRAVYEPRYTCSEARKAAHRRKI
SPVKFSNTDAASEVSPPKRQKSSSQEELGWCLSSSEDDELPAETQQKVAVKEERGASSPK
GGGTPHAGHQGPPAGRALAEDEDEYETSGEGQDIWDMLDKGNPFQFYLTRVSGIKPKYNS
GALHIKDILSPLFGTLVSSAQFNYCFDVDWLIKQYPPEFRKKPILLVHGDKREAKAHLHA
EAKPYENVSLCQAKLDIAFGTHHTKMMLLLYEEGLRVVIHTANLIRADWHQKTQGIWLSP
LYPRIAHGTHRSGESTTHFKADLISYLTAYNAPPLKEWIDLIHDHDLSETNVYLIGSTPG
RFQGSQKDNWGHFRLRKLLREHASCTPNAESWPIVGQFSSIGSMGADESKWLCSEFKETL
AALGKEGRTPGKSVAPLHLIYPSVENVRTSLEGYPAGGSLPYSIQTAEKQNWLHSYFHKW
SAETSGRSNAMPHIKTYMRPSPDFSQIAWFLVTSANLSKAAWGALEKNGAQLMIRSYELG
VLFLPSAFGLDSFPVKLKFFSGSQEPAAAFPVPYDLPPELYGSRDRPWIWNIPYTKAPDT
HGNMWVPS
NT seq 1827 nt   +upstreamnt  +downstreamnt
atgtctcaggaaggtaattatgggaggtggacaatatccagtagtgacgaaagtgaggag
gaaaagcccaaactggacaatccatctacctctcttctcccccatgccgggcagcgagca
gtgtatgagcccaggtacacctgttccgaggcccggaaagccgcccacaggaggaaaata
tcacctgtgaaattcagcaacacagatgcagcttcagaagtttcacctcccaagaggcag
aagagcagctcccaggaagagctgggttggtgcctctccagcagtgaggacgatgagctg
cccgcagagacgcagcagaaagtggctgtcaaagaggagaggggtgcttcctctcccaaa
ggcggtggcaccccacacgctggccatcagggccctcccgccggccgtgccctcgcggag
gacgaagacgaatacgaaacgtcaggggaaggccaggacatctgggacatgctggataaa
gggaaccccttccaattttacctcactagagtctcaggaattaagccaaagtacaactcg
ggagccctgcatatcaaggatattttatctcctctatttgggacacttgtatcttcagca
cagtttaactactgctttgacgtggactggctcataaaacagtatccaccggagttcagg
aagaaaccaatcctgcttgtgcatggcgataagcgagaagctaaggctcacttacacgct
gaggcaaagccttacgaaaacgtttccctctgccaggcaaagttggatattgcatttgga
acacaccacacgaagatgatgctcctgctgtatgaagaaggcctccgagtggtcatacac
accgccaacctcatccgcgctgactggcaccagaaaacgcaaggaatatggttgagccct
ttgtacccacgaattgcccacggaacccacagatctggagaatcgactacacactttaaa
gctgatctcatcagctacttgacggcttataacgcgccccctctcaaggagtggatagac
ctcatccatgaccatgatctttcagaaaccaatgtttacctcattggatcaaccccagga
cgctttcaaggaagtcaaaaagataattggggacactttaggcttaggaagcttctgaga
gagcacgcctcgtgcacgcccaacgccgagtcctggccgatagtaggtcagttttccagc
atcggctccatgggggctgacgaatccaaatggctgtgttctgagtttaaagagaccttg
gcagccctggggaaggaaggcaggaccccggggaaaagtgtcgctccgctccatttgatc
tatccttctgtggaaaatgtgcggaccagcttagaagggtatccagctgggggctctctt
ccctatagcatccagacagcggaaaaacagaattggcttcattcctatttccacaaatgg
tccgctgagacgtctggccgcagcaatgccatgccacacattaagacatacatgagaccc
tctccagacttcagtcagattgcttggttccttgtcactagcgcgaatctgtccaaagcc
gcctggggagcattagagaaaaacggcgcccagctgatgatccgttcctacgagctcggg
gtccttttcctcccatcagcatttggcctggacagcttccccgtgaaactgaaattcttc
tcgggcagccaggagccagcagcggccttccccgtgccgtacgacctgcccccagagctg
tacggaagcagagatcggccgtggatttggaacattccttataccaaagcccccgataca
cacgggaacatgtgggtcccatcctga

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