Pteronotus mesoamericanus (Parnell's mustached bat): 129065795
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Entry
129065795 CDS
T09558
Symbol
DICER1
Name
(RefSeq) endoribonuclease Dicer isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Pathway
ppam05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
129065795 (DICER1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppam03036
]
129065795 (DICER1)
Chromosome and associated proteins [BR:
ppam03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
129065795 (DICER1)
microRNA pathway
RISC loading complex
129065795 (DICER1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dicer_platform
Dicer_dsRBD
Ribonuclease_3
Dicer_PBD
Ribonucleas_3_3
Dicer_dimer
PAZ
Helicase_C
ResIII
DEAD
Cas3-like_C_2
DSRM_2
Motif
Other DBs
NCBI-GeneID:
129065795
NCBI-ProteinID:
XP_054423044
LinkDB
All DBs
Position
Unknown
AA seq
1919 aa
AA seq
DB search
MAGLQLMTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALDRNTIVCLNTGSGK
TFIAVLLTKELSYQIRGDFNRHGKRTVFLVNSANQVAQQVSAVRTHSDLKVGEYSDLEVN
ASWTKEKWNQEFTKHQVLIMTCYVALIVLKNGYLSLSDINLLVFDECHLAILDHPYREIM
KLCESCPSCPRILGLTASILNGKCDPEELEEKIQKLEKILKSNAETATDLVVLDRYTSQP
YEIVVDCGPFMDRSGLYERLLMELEEALNFINDCNISVHSKERDSTLISKQILSDCRAVL
AVLGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHFSPASLDL
KFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEEIEEKEKP
ETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPR
NKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSK
GRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGETDIEPVVDDDDV
FPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLP
INSPLRASIVGPPMSCIRLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHD
EEETSVPGRPGSTKRRQCYPKAIPECLRDSYPKPDQPCYLYVIGMVLTTPLPDELNFRRR
KLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFTLSLQMLELITRLH
QYIFSHILRLEKPALEFKPTDADSAYCVLPLNVVNDSSTLDIDFKFMEDIEKSEARIGIP
STKYSKETPFVFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKFPSPEYETFAE
YYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNK
QILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTAGDAGVGVRSLPGDFR
YPNLDFGWKKSIDSKSFISIANSSSAENDNYCKHSTIVPENAAHQGANRTSSLENHDQMS
VNCRTFFSESSSKLPIEVSTDLTAINGLSYNGNLANGSYDLANRDFCQGNQLKCYKQEIP
VQPTTSYPIQNLYTYENQPKPSDECTLLSNKYLDGNANSSTSDGSPVVAAVPGTLEAVTV
LKAGTGSEQSPAPGYSSRTLGPNPGLILQALTLSNASDGFNLERLEMLGDSFLKHAITTY
LFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVNWLPPGYVVNQD
KSNTDKWEKDEMTKDCLLANGKLDEALEEEEEEEEEEEEEEEGLAWRAPKEDADYEDDFL
EYDQEHIKFIDNMLMGSGAFVKKIPLSPFSTTDSAYEWKIPKKSSLGSLPFSSDFEDFDY
SSWDAMCYLDPSKAVEEDDFVVGFWSPSEENCGADTGKQSISYDLHTEQCIADKSIADCV
EALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRADREKAACPARENFNGQQKSLSGGRAA
ASGASSRSSACKDLEYGSLKIPPRCMFDHPDADKTLNHLISGFENFEKKINYRFKNKAYL
LQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNT
IFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIE
VPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPE
TAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQVPNS
NT seq
5760 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcctgcagctcatgacccctgcttcctcaccaatgggtcctttctttggactg
ccatggcaacaagaagcaattcatgataacatttatacgccaagaaaatatcaggttgaa
ctgcttgaagcagctctggaccgtaacaccatcgtctgtttgaacactggctcagggaag
acgtttattgcagtgctactcactaaagagctgtcctatcagatcaggggagacttcaac
agacatggaaaaaggacggtgttcctggtcaactctgcaaaccaggttgctcagcaagtg
tcagctgtcagaactcattccgatctcaaggttggggaatactcagacctagaagtaaat
gcatcttggacaaaagagaaatggaaccaagagtttactaagcaccaggttctcattatg
acttgctatgtcgccttgattgttttgaaaaatggttacttatcactgtcagacattaac
cttttggtgtttgatgagtgtcatcttgcaatcctagaccacccctaccgagaaattatg
aagctctgtgaaagttgcccatcatgccctcgtattttgggactaactgcttccatttta
aatgggaaatgtgatccagaggaattagaagaaaagattcagaaactggagaaaattctc
aagagcaatgctgaaactgcaaccgacttggtggtcttagacagatacacttctcagcca
tacgagattgtggtagactgtggaccatttatggacagaagtgggctttatgaaagactg
ctgatggaattagaagaagcacttaattttatcaatgactgtaacatatctgtacattca
aaagaaagagactctactttaatttctaaacagatactgtcagactgtcgtgcagtgttg
gcagttctgggaccctggtgtgcggataaagtagctggaatgatggtaagagagctgcag
aaatacatcaaacatgaacaagaggagctgcacaggaaatttctattgtttacagacact
ttcctacggaaaatacatgcactatgtgaagagcacttctcacctgcctcacttgacctg
aaatttgtaactcctaaagtgataaaactgcttgaaatcctgcgcaaatataaaccatat
gagcgacagcagtttgaaagtgttgagtggtacaataataggaaccaggataattatgtg
tcttggagtgattctgaagatgatgatgaggatgaagaaattgaagaaaaggagaagcca
gagacaaattttccttctccatttaccaatattttatgtggaattatttttgtggaaaga
agatacacagcagttgtcttaaacagattgataaaggaagctggcaaacaagatccagag
ctggcttacatcagcagcaattttataactggacatggcatcggaaagaatcagcctcgt
aacaaacagatggaagcagaattcagaaaacaggaagaggtacttagaaaatttcgagct
catgagaccaacctgcttattgcaacaagtatcgtggaagagggcgttgacataccaaaa
tgcaacttggtggtccgtttcgatttgcccacagagtatcgctcctatgttcagtccaag
ggaagagccagggcaccgatctccaattatataatgttagcagatacggacaaaataaaa
agttttgaagaagacctgaaaacatacaaagctattgaaaagatcttgagaaacaaatgt
tccaagtcagttgatactggtgagaccgacattgagcctgttgtggatgacgacgacgtt
ttcccaccttacgtgctgaggcccgatgatggaggcccacgagtcacaattaacacggcc
attggacacatcaatagatactgtgctagattaccaagtgacccgtttactcatctagct
cctaaatgtagaacccgagagttgcctgacggtacattctattcaacgctttatctgcca
attaactcacctcttcgagcctccattgttggtccaccaatgagttgtatacgattggct
gaaagagttgtagctcttatttgctgtgaaaaactgcacaaaattggtgaactggatgac
catttgatgcccgttgggaaagaaactgttaaatatgaagaagagcttgatttacatgat
gaagaagagaccagtgtccccggcagaccaggttccacaaaacgaagacagtgctaccca
aaagcaattccagaatgtctgagggatagctatcccaaacccgatcagccctgttacctg
tacgtgataggaatggttctaacaacaccattacctgatgagctcaacttcagaaggcgg
aagctctatccccctgaggacaccacaagatgctttggaatactgacagccaaacccata
cctcaaattccgcactttcctgtgtatactcgctctggagaggttaccatatctattgag
ttgaagaagtctggtttcacactgtctcttcaaatgcttgagttgattacaagactccac
cagtatatattctcacatattcttcgccttgaaaaacctgcactagaatttaaacccaca
gacgctgattcagcatactgtgttctacctctgaatgttgttaatgactccagcactttg
gacattgactttaaattcatggaagatattgagaaatctgaagctcgcataggcattccc
agtaccaagtattcaaaagaaacaccctttgtgtttaaattggaagattaccaggatgca
gttatcattccaaggtatcgaaattttgatcagcctcatcgattttatgtagctgatgtg
tacactgatcttaccccactgagtaaatttccttcccccgagtatgaaacttttgcagaa
tattataaaacaaagtataaccttgacctgaccaatctcaaccagccgctgctggatgtg
gaccacacatcttcaagacttaaccttctgacacctcgccatttgaatcagaaagggaaa
gctctccctctaagcagtgctgaaaagaggaaagccaagtgggaaagtctgcagaataaa
cagatactggttccagagctctgtgctatacaccccattccagcctcgctgtggagaaag
gcagtctgcctccccagcatcctctaccgccttcactgccttctgaccgcggaggagctc
agagcccagacagccggtgacgctggcgtgggagtcagatcgcttcctggggactttagg
taccctaacttagactttgggtggaaaaaatctatcgacagcaaatctttcatctcaatt
gctaactcctcttcagctgaaaatgataattactgtaagcacagcacaattgtccctgaa
aatgctgcacatcaaggtgctaatagaacctcctctctagaaaatcatgaccaaatgtct
gtgaactgcagaacgttcttcagtgagtcatccagtaaactcccaattgaagtttcaaca
gatctgacagcaattaatggtctttcttacaatggaaatcttgccaatggcagttatgac
ttagctaacagagacttttgccaaggaaatcagctgaaatgctacaagcaggaaatacct
gtacaaccaactacctcatatcccattcaaaatttatacacttacgagaaccagcccaag
cccagcgatgaatgtactctactgagtaacaaataccttgatggaaatgctaactcatct
acctcagatggcagtcccgtggtggccgcggtgcctggtactctggaagctgttacagtg
ctcaaggccgggacgggctctgagcagagccctgctcctgggtactcctcgaggactctt
ggcccaaatcctggactcattcttcaggctttgaccctttcgaatgccagcgatggattt
aacctggagcggcttgagatgctcggtgactcctttttgaagcacgccatcaccacgtac
ctgttttgcacttaccccgatgctcacgagggccgcctttcctacatgagaagcaaaaag
gtcagcaactgtaatctctatcggctcggaaaaaagaaaggactgcccagccgcatggtg
gtgtcaatatttgatccccctgtgaattggcttccccctggttatgtagtaaatcaagac
aaaagtaacacagataaatgggaaaaagatgaaatgacaaaggactgcctgctggctaac
ggcaagctggacgaggccttggaggaggaggaggaagaggaggaggaggaggaggaggag
gaggagggcctggcgtggagggcccccaaggaggacgctgactacgaggacgacttcctg
gagtacgatcaggaacacatcaagtttatagacaacatgttaatggggtcgggagctttt
gtaaagaaaattcctctgtctcctttttcgaccactgattctgcatatgaatggaaaata
cccaaaaagtcctccttaggcagtctgccgttttcatccgactttgaggattttgactat
agctcttgggatgcgatgtgctacctggaccccagcaaagcagtggaggaggatgacttt
gtggtggggttctggagcccgtcagaggagaactgcggtgctgacacagggaagcagtcc
atctcctacgacctgcacacggagcagtgcatcgctgacaaaagcatagccgactgcgtg
gaggccctgctgggctgctacctaaccagctgtggcgagcgggctgcgcagctcttcctc
tgctcgctggggctgaaggtgctcccggtgattaagagggctgaccgggaaaaggccgcg
tgccccgccagggagaacttcaatggccaacaaaagagcctttcagggggccgcgctgct
gcctctggagccagctcccgctcctccgcgtgtaaagacttggagtacggtagcttgaag
atcccgccgaggtgcatgtttgatcatccagacgcagataaaacactgaatcacctgata
tcaggttttgaaaattttgaaaagaaaatcaactacagattcaagaataaggcttacctt
ctacaggctttcacacacgcctcctaccactacaatactattactgattgttaccagcgc
ttagaattcctgggagatgcgattttggactacctcataaccaagcacctttacgaagac
ccgcggcagcactccccaggggtcctgaccgacctgcgctctgctctggtcaacaacacc
atcttcgcgtcgttggccgtgaagtacgactaccacaagtacttcaaagctgtgtccccg
gagctcttccacgtcattgatgactttgtgcagttccagctcgagaagaacgagatgcag
gggatggattccgagcttaggagatctgaggaggacgaagagaaggaagaggacattgaa
gttccaaaggccatgggagatatttttgagtcacttgctggtgccatttacatggatagt
gggatgtcactggagatggtttggcaggtgtactatcctatgatgcggccactaatagaa
aaattttctgcaaatgtgccccgttcccctgtgcgagaattgcttgaaatggaaccagaa
accgccaaatttagcccggctgagagaacttacgacggcaaggtcagagtcaccgtggaa
gtggtaggcaaggggaagtttaaaggcgttggccgcagttacaggatcgccaaatctgca
gcagcgagaagagccctacgaagcctcaaagctaatcaacctcaggttcccaacagctga
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integrated database retrieval system
