Pteronotus mesoamericanus (Parnell's mustached bat): 129067523
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Entry
129067523 CDS
T09558
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppam03041
]
129067523 (DDX1)
03016 Transfer RNA biogenesis [BR:
ppam03016
]
129067523 (DDX1)
Enzymes [BR:
ppam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129067523 (DDX1)
Spliceosome [BR:
ppam03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
129067523 (DDX1)
Transfer RNA biogenesis [BR:
ppam03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
129067523 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
DUF5766
CMS1
Motif
Other DBs
NCBI-GeneID:
129067523
NCBI-ProteinID:
XP_054425457
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH
GCRATKGLTKGKHYYEVSCHDQGLCRVGWSSMQASLDLGTDKFGFGFGGTGKKSHNKQFD
SYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF
NFGEEEFKFPPKDGFVALSKAPDSYIVKSQHTGSAQVAQTKFLPNAPKALIVEPSRELAE
QTLNNVKQFKKYIDNPKLRELLIIGGVAARDQLSVLDNGVDIVVGTPGRLDDLVSTGKLN
LSQVRFLVLDEADGLLSQGYSDFINRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKADRLWERLGKNHIRTDEVHAKDNTRPGAN
SPEMWSEAIKVLKGEYTVRAIKEHKMDQAIIFCRTKIDCDNLEQYFMQQGGGPDKKGHQF
SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS
EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRTVGGGNYKGHVEVLAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttctccgagatgggtgttatgcctgaaattgcgcaagctgtggaagagatg
gattggcttctcccgactgatatccaagcagaatccatcccattgatcctaggaggcggc
gatgtacttatggctgcagaaacaggaagtggaaaaactggtgcgttcagcattcccgtc
atccagatcgtttacgaaactctcaaagaccagcaggaaggcaagaaggggaaaaccaca
attaaaactggcgcttcagttctcaacaaatggcagatgaacccgtacgacagaggatct
gcttttgcaattgggtccgatggtctttgttgtcaaagcagagaagtaaaggaatggcat
ggatgtagagctaccaaaggactaacgaaagggaaacactactatgaagtgtcctgtcat
gaccagggactctgcagagtgggctggtcctccatgcaggcttccttagatctcggtact
gacaagtttggatttggctttggtggaacaggaaagaaatcccacaacaaacaatttgat
agttatggagaggaattcactatgcatgataccattgggtgttacctagatatagataaa
ggacatgtcaagttctccaaaaatggaaaagaccttggtctggcgtttgaaataccaccc
catatgaagaaccaagccctctttcctgcctgtgttttgaagaatgctgaactgaaattt
aactttggtgaagaagaatttaagttcccaccaaaagatggctttgtagccctttccaag
gcaccagacagttacattgtcaagtcgcaacacacaggcagcgcgcaggtggcccagacc
aagttcctccccaacgctcccaaggcgctcatcgtggagccctcccgagagttagccgag
cagactttgaacaacgtcaagcaatttaagaaatatattgataatcctaaattaagggag
ctcctgataattggaggtgttgcagctcgggatcagctctctgtattggacaatggggta
gatatagttgttggcactccgggaagactagatgatctggtgtcaactggaaagctgaac
ttatcccaagttagattcctggtcctggatgaagctgatgggctgctttctcaaggttac
tctgactttataaataggattcacagtcagattcctcagattacctctgatggaaaaaga
cttcaggtgatcgtttgctctgctactttgcattcttttgatgtaaagaaactgtcggag
aagataatgcattttcccacctgggttgatttaaaaggagaagattctgttccagatact
gtgcaccatgtggttgtcccagtgaatcccaaggccgacagactctgggagagacttggg
aaaaaccacatcagaacggatgaagtacatgcgaaggataacacgaggcccggagctaac
agcccagagatgtggtctgaagctattaaagtcctgaagggggagtatactgtccgggca
atcaaggagcacaagatggatcaagcaattattttctgtagaactaaaatcgactgtgat
aacttggagcagtattttatgcaacaaggcggaggaccggataaaaaaggacaccagttc
tcatgcgtttgtcttcatggtgacagaaagcctcatgagagaaagcagaacttggaaagg
tttaagaaaggagatgtcaggttcttgatttgcacagatgtagctgcgagaggaattgat
atccatggcgttccttatgttatcaatgtcaccctgcctgatgaaaagcaaaactatgta
caccgaattggcagagtgggaagagctgaaaggatgggtctggccatttccctggtggca
acagaaaaagagaaggtttggtaccacgtgtgcagcagccgtgggaaggggtgctacaac
acaaggctcaaggaagacggaggctgcaccatctggtacaacgagatgcagttgctgtct
gagatagaagagcacctgaactgcaccatttctcaggtggagccggatataaaggtgcca
gtggatgaattcgatgggaaggtgacctatggtcaaaaaagaacagttggcggtggaaac
tataaaggccatgtggaagtgttggcacctacagttcaagagttggccgcccttgaaaag
gaggcgcagacgtcttttctgcaccttggctaccttcctaaccagctgttcagaaccttc
tga
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