Pteronotus mesoamericanus (Parnell's mustached bat): 129067695
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Entry
129067695 CDS
T09558
Symbol
CPSF3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Pathway
ppam03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129067695 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppam03021
]
129067695 (CPSF3)
03019 Messenger RNA biogenesis [BR:
ppam03019
]
129067695 (CPSF3)
Transcription machinery [BR:
ppam03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
129067695 (CPSF3)
Messenger RNA biogenesis [BR:
ppam03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
129067695 (CPSF3)
U7-dependent histone pre-mRNA processing factors
129067695 (CPSF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
129067695
NCBI-ProteinID:
XP_054425799
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MSVIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLID
PAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADD
MLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDF
SRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPV
FALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININ
NPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVE
GTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGE
QNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGLLADKKPEQGQR
VSGILVKRNFNYHILSPCDLSNYTDLAMSTVKQTQAIPYTGPFNLLFYQLQKLTGDVEEL
EIQEKPALKVFKNITVIQEPGMVVLEWLANPSNDMYADTVTTVILEVQSNPKIRKGAVQK
VSKKLDMHVYSKRLEIMLQDIFGEDCVSVKDGAVLGVTVDGKTANVNLETRTAECEEGSE
DDESLREMVELAAQRLYEALTPVP
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgattcctgcggaagagagtgaccaactgctgatccgaccccttggagctggg
caggaagtcggaagatcatgcatcattctggagttcaaaggaagaaaaataatgctggac
tgcgggatccaccccggcctggaaggaatggatgctcttccttatatcgatttaattgac
ccagctgagattgatctcctcctaattagtcatttccatttggatcactgtggagcattg
ccctggtttctgcagaagacgagtttcaaaggaaggacattcatgacgcacgctacgaaa
gctatttacagatggcttctttcagattatgtcaaagtcagcaatatatcagcggacgac
atgctatacactgagacagatttggaggagagcatggacaagatcgagaccatcaatttt
cacgaggttaaggaagttgccggaatcaagttttggtgttaccacgcaggccacgtgctg
ggagccgccatgttcatgattgagatcgcaggcgtgaagcttttgtatactggtgatttc
tcaagacaagaagacagacacttgatggcagctgaaattcctaatattaaacctgatatt
cttatcattgaatctacttacgggacccatatccacgagaagcgtgaagagcgagaagca
agattttgcaacacggttcatgatattgtaaacagagggggcagaggtctcattcccgtc
ttcgccctcgggagggctcaggagctgctcttgattctagatgagtactggcagaaccac
ccggaactgcatgacatccccatatactacgcgtcgtctctggctaagaagtgtatggcc
gtgtaccagacgtacgtgaatgccatgaatgacaaaatccgcaaacagatcaacatcaat
aaccccttcgttttcaagcacattagcaacctcaagagcatggatcactttgatgacatt
ggtcccagcgtggtgatggcctccccgggcatgatgcagagcggcttgtccagggagctc
tttgaaagctggtgcaccgacaagaggaacggtgtcatcatagcggggtactgtgtagaa
gggacgctcgccaagcacatcatgtctgagcccgaggagatcaccaccatgtccgggcag
aagctgccgctgaagatgtccgtggactacatttctttctccgcccacaccgattaccag
caaaccagcgagtttattcgcgctttgaaaccgcctcacgtgattttagtccacggagaa
cagaacgaaatggcccggttgaaagcagccctgattcgagaatatgaagataacgatgaa
gtccacatagaggtccataaccctcggaacacagaagcagtgaccttgaacttcagagga
gaaaagctggccaaggtcatgggccttctagccgacaaaaagccagaacaaggccagcgg
gtctcgggaatactggttaaaagaaactttaattatcacatactttctccttgtgacctc
tccaattataccgacttggccatgagcaccgtgaagcagacccaagccattccgtacacc
gggccttttaatttgctcttttaccagctacagaaattgacaggtgatgtagaagaatta
gaaattcaagaaaaacctgctttgaaagtgttcaaaaatattactgtaatacaggaacca
ggaatggtggtattagaatggttggcaaacccttccaatgacatgtacgcggacacagtg
acgaccgtgatcctggaagtgcagtcgaacccgaagataaggaaaggggcagtacagaag
gtctctaagaagctggacatgcacgtgtacagcaagaggctggagatcatgctgcaggac
atctttggagaagactgtgtcagtgtgaaagacggtgccgtcctcggcgtcacagtggac
ggcaagacggctaatgtgaacttggagactcggacggccgagtgcgaggagggcagcgag
gacgacgagtccctgcgggagatggtggagctggcggcgcagaggctgtacgaggccctc
acgccggtgccctga
DBGET
integrated database retrieval system
