Pteronotus mesoamericanus (Parnell's mustached bat): 129067864
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Entry
129067864 CDS
T09558
Symbol
SCAF8
Name
(RefSeq) SR-related and CTD-associated factor 8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppam03021
]
129067864 (SCAF8)
03041 Spliceosome [BR:
ppam03041
]
129067864 (SCAF8)
Transcription machinery [BR:
ppam03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
129067864 (SCAF8)
Spliceosome [BR:
ppam03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
129067864 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
DUF3525
Transformer
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
129067864
NCBI-ProteinID:
XP_054426113
LinkDB
All DBs
Position
Unknown
AA seq
1269 aa
AA seq
DB search
MEAVKIFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN
NVFKSEIIQPLLDMAAGIPPPVVTPVLASTTAAMSNTPGTPVTPVTPANVVQGLPDPWVS
QIANTDTLTAVAQILQSPQGQQFQQLIQTLQIQQQKPQPSILQALDAGLVVQLQALTAQL
TAAAAAASTLNPLEQGVSFNKKLMDRFDFGEDSEHSEEPKKEIPTSQLSHVSESVNNSIF
HQIAEQLQQQNLEHLRQQLLEQQQPQKATPQDSQEGTFGSEHSASPSQGSSQQHFLEPEA
NLDDSIDIQQQDMDIDEGQDGVEEEIFEQEAKKVAVRSRSRTHSRSRSRSPRKRRSRSRS
GSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQKKGLPPVRSKTLSVCSTTLW
VGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFRALQKLSSGSYKIG
SKVIKIAWALNKGVKTEYKQFWDVDLGVTYIPWEKVKVDDLEGFAEGGMIDQETVNTEWE
TVKSSEPVKETVQTTQSPPPVEKETVVTTQAEVFPPPVAMLQIPVAPAVPTVSLVPPAFP
VSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPPPVVPPPTIPPVVPTPLVQPPL
SMTPETVKEVGFGSLVLPGGPVASSLAASTLPAGNVFNPPPKQAEPEEKVPHLIDHQISS
GENTRSVIPNDIPSSPAILGQPPNVTSNSGILGVQRPNASNNPEILGVRPSNVSSSSGII
GAQPPNILNNSGILGIQPPSASSSSGLLGVLPPSIPNNSGLVGVQPPNIPNTSGLLGTQP
PAGPQNLPPLNLSSQRLPVMPMLDLRPGLIPQTPGPRFPLLQPGIPPQRGVPPPSILDSA
LHPPPRGPFPPGDIFSQPERPFLVPGRQSIDNITNPEKRIPLGNDNIQQEGDRDYRFPPI
ETRESMSRPPPVDVREVVGRPVDPREGPGRPPLDGRDHFGRPPVDIRENLVRPGMDHLGR
RDHFGFNPEKPWGPRDFDEREHRVLPVFAGPKGIHEERGRFRSGNYRFDPRSGPWNRGFG
QEVHRDFDDRRRHWERQRDRDDRDFDFCREINGNRLGRDRIQNTWVPPPQARVFDFFEGA
TSQRKGDNVPQVNGENAERHAQPPPLPVQNDPELYEKLTSSSEINKEKSDTVADIESEPV
VESTETEGT
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgtgaaaatcttcaacagcgagttatattccctgaatgactacaaaccaccg
atttcaaaagcaaaaatgacccaaattactaaggcagccatcaaagctattaagttctat
aaacatgtggtacagagtgttgagaaattcattcagaagtgtaaaccagaatacaaggta
cctggactttatgttattgactccattgtacgacaatctcgacatcagtttggtcaagaa
aaggatgtgtttgcacccagatttagtaataacatcattagcactttccagaatttatat
cgttgccctggggatgacaagagtaaaatagtaagagtgttaaatttatggcagaagaat
aatgtatttaagagtgagattattcagcctctattggatatggcagcggggattcctccg
ccagttgtcaccccggttctggccagtactacggctgctatgagcaacaccccaggaact
cctgtgacacctgttactccagccaatgtggtccaaggcttacctgatccatgggtgtcc
cagatagcaaataccgatacgcttacggctgtagctcagatcttacaaagtcctcagggc
cagcagtttcagcagttaatacagactttacagatacaacagcagaagccacagccgtcc
atcctgcaggccctggatgccggccttgtagttcagctgcaggctctgaccgcacagctc
acagcggcagcggcagccgccagcaccctcaaccccttggaacagggagtgtcttttaac
aagaagttgatggatagatttgattttggggaagattctgaacatagtgaagaacccaaa
aaagaaattccaacttctcaactttctcatgtttcagaatctgtgaacaattccattttt
catcagatagcagagcaactacagcagcaaaaccttgaacatctcaggcagcaactcttg
gaacagcaacagcctcaaaaggcaacccctcaggacagccaggaaggaacattcgggtca
gagcactctgcctccccctcacaggggagcagccagcagcacttccttgagccggaagca
aatttggatgattccatagacatccagcaacaggacatggatatagatgaagggcaagat
ggagtagaagaggagatctttgaacaagaagcaaagaaagtggctgttcgctcgagatca
agaacacattcacgctctcgttcaaggtcaccaagaaaacggaggtctaggtcacgatct
ggttctcgaaagcgtaagcacagaaagcgctcacgctcacgctcaagggaaagaaagagg
aagtcatcgcgttcctactccagcgaaagacgagctagagaacgggagaaggaacggcag
aagaaggggctgcctccagtgaggtctaaaacattaagtgtatgcagtaccactctctgg
gttgggcaggtggacaagaaggcgacacagcaggatttaaccaacctttttgaagagttt
ggacaaattgaatccattaatatgattcctcccaggggctgtgcttatgtctgcatggtt
caccgacaagacgcatttcgagctcttcagaaacttagttctggctcatacaaaattggt
tccaaggtcattaagattgcatgggctttaaacaaaggtgtaaaaacagagtacaaacag
ttctgggatgtggatctcggagttacatatatcccatgggaaaaagtcaaagtggatgac
ctggaggggtttgcagaagggggcatgattgaccaggaaaccgtgaacactgagtgggaa
actgtgaaaagctcagaacctgttaaagagacggtccagacaactcagagcccacctcca
gttgaaaaggagacagtggtcacaacccaggcagaggtttttcctccacctgttgctatg
ttacagattccagtagcaccagctgtgcctacagttagtttagtcccaccagcatttcct
gtgtcaatgccggtccctcctcctggattcagtccaatccctccacctccttttctacga
gcaagttttaacccttcacaaccacctcctggtttcatgccacctccagttccaccacct
gttgtaccgccacctactattccaccagtagtaccaacgccgttagtgcagccgccatta
tccatgactccagaaactgtgaaagaggttggatttggcagccttgttttaccaggtggc
cctgttgccagcagtcttgctgcttccactctgccagctggaaatgtttttaatcctcct
cctaaacaagcagagcctgaagaaaaagtacctcatcttatagaccaccagatttcttct
ggtgaaaacaccagatcagtgattccaaatgatattccaagtagccctgcgattttagga
cagccaccaaatgtgacaagcaattctggaattcttggagttcaaagaccaaatgcatcc
aataatcctgaaattcttggagtccggccatctaacgtttctagcagttctgggattatt
ggagcccagccaccaaatattctgaataactctggaattttgggaatacagccaccaagt
gcttcgagtagttctggacttttgggagtgctaccccccagtatccctaacaattctgga
cttgtaggagtgcagccaccaaatattccaaatacatcgggacttttgggaacacagcca
ccagctgggcctcaaaatttaccccctttaaatctctctagtcaaaggttgcctgtaatg
ccaatgttagaccttcgtccgggactgataccgcagacacctggaccaagattcccttta
ctgcagcctggaattccaccccagcgcggagtccctcccccatccatacttgattcagct
cttcatccaccaccccgtggcccttttcctccaggagatatttttagtcagccagaaaga
ccttttctagttcctggaaggcaaagtatagacaatattactaatccagaaaaaaggata
ccacttggaaatgataacattcaacaggaaggagatagagattaccggtttcctcctata
gaaaccagggaaagcatgagcagacctccccccgtggatgtgagggaggtggttggacgg
cctgtagacccacgagaaggtcctggaaggcctccattagatggtagggatcattttgga
agacctcctgtagatattagagaaaatcttgtgaggccaggtatggatcatcttggtcga
agagaccactttggcttcaatccagagaagccgtggggccctagagattttgacgagaga
gagcatcgagttctacctgtcttcgctggtccaaaaggcatacatgaagaaaggggtaga
ttccggtctgggaactatcgatttgaccctagaagtggtccttggaacagaggatttgga
caagaagttcacagagattttgatgaccgcagaagacactgggagaggcagagggatagg
gatgacagagattttgatttctgcagagaaattaatggaaatcgtcttggacgagacaga
attcaaaacacctgggtcccccctcctcaagctcgggtttttgatttctttgaaggggcc
acttctcaacgaaaaggtgataatgtgcctcaggttaatggtgaaaatgctgagagacat
gctcaaccaccaccgttaccagtacagaatgatcctgaactttatgaaaaactgacatct
tcaagtgaaataaacaaggagaagagtgacacagttgctgatatagaaagtgaaccagtg
gtagaaagcacagaaactgaggggacataa
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integrated database retrieval system
