Pteronotus mesoamericanus (Parnell's mustached bat): 129067870
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Entry
129067870 CDS
T09558
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Pathway
ppam03082
ATP-dependent chromatin remodeling
ppam04714
Thermogenesis
ppam05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129067870 (ARID1B)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
129067870 (ARID1B)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
129067870 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppam03000
]
129067870 (ARID1B)
03021 Transcription machinery [BR:
ppam03021
]
129067870 (ARID1B)
03036 Chromosome and associated proteins [BR:
ppam03036
]
129067870 (ARID1B)
Transcription factors [BR:
ppam03000
]
Eukaryotic type
Helix-turn-helix
ARID
129067870 (ARID1B)
Transcription machinery [BR:
ppam03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
129067870 (ARID1B)
Chromosome and associated proteins [BR:
ppam03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
129067870 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
129067870
NCBI-ProteinID:
XP_054426124
LinkDB
All DBs
Position
Unknown
AA seq
2358 aa
AA seq
DB search
MAARAAAAAASSRAGSGERRAPPGPRPAPGARDLEAGTRGAAAAAAPGPMLGGSGGDGLN
SVHHHPLHPRHELNMAHHASAAAAASSNSAKSGGSEAALKEGGSAAALSSASSAASSSSS
ASGPGSAMETGLLPNHTLKTVGEAPSAPPHQQHHHHHAHHHHHHAHHLHHHHALQQQLNQ
FQQQQQQQQQQQHPISNNNSLGGAGGGAAQPGPDMEQPQHGGAKDSAAGSQADPPGQPLL
SKPGDEDDAPPKMGEPAGGRYEHPGLGALGAQQPQPVAVPGGGGGGPAAVSEFNNYYGSA
APASGGPGGRAGPCFDQHGGQQSPGMGMMHSASAAAGAPSSMDPLQNSHEGYPNSQYNHY
PGYSRPGAGGGGGGGGGGGGGGGSGGGGGGGGAGAGAVAAAAAAAAAAAGGGGGGYGGSS
SGYGVLNSPRQQGGGMMMGPGGGGAASLSKAAAGAAAGGFQRFAGQNQHPSGATPTLNQL
LTSPSPMMRSYSGSYTDYSSPSAPPPPSQPQSQAAAGAAAGGQQAAAGMGLGKDMGAQYA
AASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSP
YPGGSYGPPGPQRYPMGIQGRTPGAMGGMQYPQQQMPPQYGQQGVSGYCQQGQQPYYNQQ
PQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYGTRSQPPMAPGKPNHEDLNLIQQERPSS
LPVEVLTSEDTDFGLKDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPFSPH
ASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQPESSAHPALSQ
SPMPQERGFMAGTQRNPQMSQYGPQQTGPSMSPHPSPGGQMHPGIGSFQQSNSSGTYGPQ
MSQYGPQGNYSRPPTYSGVPSASYSGPGPGVGINANNQMHGPGPGQPCGAMPLGRMPSAG
MQNRPFPGNMSSMTPSSPGLSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGS
FPGMNQSGLVASSSPYSQPMNNSSGLMNTQAPPYSMTPNMVNSSTASMGLADMMSPGESK
LPLPLKADGKEEGTPQPESKAKDSYSSQGISQPPTPGNLPVPSPMSPSSASISSFHGDES
DSISSPGWPKTPSSPKSSSSSTTGEKITKVYELGNEPERKLWVDRYLTFMEERGSPVSSL
PAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQYLF
AFECKTERGEEPPPEVFSTGETKKQPKLQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDL
KPPTPASTPHGQMTPMQGGRSSTVSVHDPFSDASDSSFPKRNSMTPSAPYQQGLSMPDVM
GRVPYEPNKDPFGGMRKVPGGSEPFMTQGPMPTSSMQDVYSQSPSGAMSSLGMGQRQQFP
YGTTYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMYGPPAKRHEGD
MYNMQYGNQQQEMYNQYGGSYSGPDRRPMQGQYPYPYNRERMQGPGQMQPHAMPPQMMGG
PMPSASGEGPQQSMWAARNDMPYPYQNRQGPGGPAQAPPYPGMNRSDDMMVPDQRINHES
PWPSHVSQRQPYMSSSASMQPITRPPQSSYQTPPSLPNHISRAPSPASFPRSLESRMSPS
KSPFLPSMKMQKVMPTVPTSQVAGPPPQPPPIRREITFPPGSVEASQPVLKQRRKITSKD
IVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSGFLELLVEYFRKC
LIDIFGILMEYEVGDPSQKALQSAVKKDDGQASADDSGKEEEDAECMGDEGDEEEDEEED
GGKVETEEKSGSALTPPDTTADPKEKPRQASKFDKLPIKIVKKNNLFVVDRSDKLGRVQE
FTSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRRPPPPLSSTGRKKELEGRGDVEEQQER
SIIATIDDVLSARPGALPEDAHPGAQAESSKFPFGIHQAKSHRNIKLLEDEPRSRDETPL
CTTAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKLILLHHEHPERKRA
PQTYEKEEDEDKGLACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSAYTESICLPILDG
LLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLILATPPFSRQEKF
YATLVRYVGDRKNPVCREMSMALLSNLAQGDTLAARAIAVQKGSIGNLISFLEDGVTMAQ
YQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLHEGRLLDISISAVL
NSLVASVICDVLFQIGQL
NT seq
7077 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcgggcagcagcggcggcggcgtcgtcgcgggcaggcagtggcgagcggcgg
gcgccccccgggccgcggccggcgcccggggcccgggacctggaggcggggacgcgcggc
gcggcggcggcggcggccccgggacccatgctggggggcagcggcggcgacggcctgaac
agtgtgcaccaccaccccctgcacccccgtcacgaactgaacatggcccatcacgcgagc
gcggccgccgccgccagctctaacagcgccaagagcggcggatccgaggcggctctcaag
gagggtggaagcgccgccgcgctgtcctccgcctcctccgcggcgtcctcctcttcctcc
gcgtcgggcccgggctcggccatggagacggggctgctccccaaccacacactgaaaacc
gttggcgaggccccctccgcgccgccccaccagcagcaccaccaccaccatgcccaccac
caccaccaccatgcccaccacctccaccaccaccacgcactacagcagcagctaaaccag
ttccagcagcagcagcagcagcagcagcagcagcaacatcccatttccaacaacaacagc
ctcggcggcgcgggcggcggcgcggctcagcccggtcccgacatggagcagccgcaacat
ggaggcgccaaggacagtgccgcgggcagccaggccgaccccccgggccagcctctgctg
agcaagccgggcgacgaggacgacgcgccgcccaagatgggggagccggcgggcggccgg
tacgagcacccgggcctgggcgccctgggcgcgcagcagcctcagccggtcgccgtgccc
gggggcggcggcggcggcccggcggccgtctccgagtttaataattactatggcagcgct
gcccctgcgagcggcggccccggcggccgcgccgggccttgctttgatcaacatggcgga
caacaaagccccgggatggggatgatgcactccgcctcagccgccgccggagcccccagc
agcatggaccccctgcagaactcccacgaagggtaccccaacagccagtacaaccattat
ccgggctacagccggcccggcgcgggcggcggcggcggaggcggaggcggaggaggagga
ggaggaggcagcggaggaggaggaggaggaggaggagcaggagcgggagctgtggcggcg
gcggccgcggcggcggcagcagcagcaggaggcggcggcggcggctatgggggctcgtcc
tcggggtacggggtgctgaactccccccggcagcagggcggcggcatgatgatgggcccc
gggggcggcggggccgcgagcctcagcaaggcggccgccggcgcggcggcagggggcttc
cagcgcttcgccggacagaaccagcacccgtcgggggccaccccgaccctcaaccagctg
ctcacctcgcccagccccatgatgaggagctacagcggcagctataccgactacagcagc
cccagcgcgccgccgccgccgtcgcagccccagtcccaggcggcggcgggggcggcggcg
ggcggccagcaggcggccgcgggcatgggcttgggcaaggacatgggcgcccagtacgcc
gctgccagcccggcctgggcggccgcgcaacaaaggagccacccggcgatgagccccggc
acccccggccccaccatgggcagatcccagggcagcccgatggaccccatggtgatgaag
aggccccagttgtatgggatgggcagtaaccctcattcccagcctcagcagagcagccct
taccctggaggttcctacggccccccaggcccgcagcggtaccccatgggcatccagggt
cggacccccggggccatgggaggaatgcagtacccgcagcagcagatgccaccacagtat
ggacaacaaggtgtgagcggttactgccagcagggccagcagccttattacaaccagcag
ccgcagcctccgcacctgcccccgcaggctcagtatctgccgtcccagtcccagcagagg
taccagccgcagcaggacatgtctcaggaaggctatggaactaggtctcaacctcctatg
gctcctgggaaacctaaccacgaagacttgaacctgatacaacaagaaagaccatcaagt
ttaccagttgaagtcttgacctcggaggataccgactttggactcaaggacctgtctggc
tccatcgatgacctccccacgggaacagaagccaccctgagctcagcggtcagtgcgtct
gggtccacaagcagccaaggggatcagagcaacccggctcagtcgcctttctccccacac
gcgtcccctcatctctccagcatccctgggggcccatcaccttctcctgtgggctcccct
gtaggaagcaaccagtcacggtcaggcccgatctctcctgcaagtatcccaggcagccag
atgccgcctcagccccctgggagccagccggagtcgagcgcccatcccgccctgagccag
tccccgatgccacaggaaagaggttttatggcaggcacacaaagaaaccctcaaatgtct
caatatggacctcagcagacaggaccatccatgtcgcctcatccttctcccggaggccag
atgcatcctgggatcggtagctttcagcagagtaactcaagtggaacttacggtccacag
atgagccagtatggaccacaaggtaactactccagacccccaacgtatagcggggtgccc
agtgcaagctacagtggcccagggcctggcgtgggcatcaatgccaacaaccagatgcat
ggaccagggccaggccagccatgtggtgctatgcccctgggacgaatgccatcggctggg
atgcagaacagaccgtttcctggaaatatgagcagcatgacccccagctctcctggcctg
tcccagcagggcgggcccggaatggggccgccaatgccgaccgtgaaccgtaaggcacag
gaggcagctgctgcagtgatgcaggccgctgcgaactcagcgcagagcaggcaaggcagc
tttccgggcatgaatcagagtggactcgtggcttccagctctccctacagccagcccatg
aacaacagctctgggctgatgaacacccaggcgccgccctacagcatgacgcccaacatg
gtgaacagctccacagcatctatgggtcttgcagatatgatgtctcctggtgaatccaaa
ctgcccctgcctctcaaagcagacggtaaagaagaaggcactccacagcctgagagcaag
gcgaaggatagctacagctctcagggtatttctcagcccccaacccccggcaacctgcca
gtcccttccccaatgtcccccagctctgctagcatctcctcatttcatggagatgaaagt
gatagcattagcagcccaggctggccaaagactccatcaagccctaaatccagctcctcc
tccaccactggggaaaagatcacaaaggtgtatgagttggggaacgagccagagagaaag
ctgtgggttgaccgctacctgaccttcatggaagagagaggctcccctgtctccagcctg
cctgccgtgggcaagaagcccctggacctgttccgactctatgtctgtgtcaaagagatc
ggaggtttggcccaggttaataaaaacaagaagtggcgtgagctggcaaccaacctgaat
gttggcacttcgagcagcgcagcgagctccctgaaaaagcagtatatccagtacctgttt
gcctttgagtgcaagacggaacgtggggaggagcctccacccgaagtcttcagcactggg
gagaccaagaagcagcccaagctgcagccgccatctcctgctaactcaggatccttgcaa
ggtccacagaccccccaatcaactggcagtaattcaatggcagaggttccaggtgacctg
aagccacctactccagcctccacccctcatggacagatgactccaatgcaaggtggaaga
agcagtacagtcagtgtgcacgacccattctcagacgcgagtgattcctcgttccccaaa
cggaactccatgaccccgagtgccccgtaccagcagggcctgagcatgcccgacgtgatg
ggcagggtgccctacgagcccaacaaggaccccttcgggggcatgagaaaagtgcctgga
ggcagtgagcccttcatgacgcaagggccgatgcccacaagcagcatgcaggacgtgtac
agccagagcccctccggagccatgtccagtctgggcatggggcagcggcagcagtttccc
tatggaaccacctatgatcggaggcatgagccctatgggcagcagtacccgggccaaggc
cccccctcaggacagccgccgtatggaggacaccagccaggcctctatccgcagcagccg
aattacaaacgccatatggacggcatgtacgggcctccagccaaacgccatgagggagac
atgtacaacatgcagtatggcaaccagcagcaggagatgtacaaccagtatggaggctcc
tactcaggcccggaccggaggcccatgcagggccagtacccgtacccctacaaccgggag
aggatgcagggcccgggccagatgcagccgcacgccatgcccccgcagatgatgggcggc
cccatgccctcggcctccggcgaggggccccagcagagcatgtgggcggctcggaatgac
atgccttacccctaccagaaccggcagggcccaggcggccctgcacaagcaccgccgtat
cccggcatgaaccgctcggacgacatgatggtccctgatcagaggatcaatcacgagagc
ccgtggccttcccacgtcagccagcgtcagccttacatgtcctcctccgcctccatgcag
cccatcacacgcccgccgcagtcgtcctaccagacgccgccgtcgctgccaaaccacatc
tccagagcacccagccccgcgtccttcccgcgctccctcgagagccgcatgtcgcccagc
aagtctcccttcctgccctccatgaagatgcagaaggtcatgcccaccgtgcccacgtcc
caggttgccgggccgcctccccagccccccccaatccggagggagatcaccttccctccc
ggctccgtggaagcatcgcagccagtcttgaaacaaaggcgaaagattacctcaaaggac
atcgttactccggaggcatggcgcgtgatgatgtccctgaagtcaggtcttctggctgaa
agtacttgggctttggacactattaatattctcctgtatgacgacagcactgtcgctaca
ttcaatctctcccagttgtccggatttctcgaacttttagtagagtactttagaaaatgc
ctgattgacatttttggaattcttatggaatacgaagtgggagaccccagccaaaaagca
cttcagagtgcagtgaagaaagatgacggccaggcctcggccgacgattctggcaaagag
gaggaagatgctgaatgtatgggggacgagggcgacgaggaggaggatgaggaggaagat
ggtggaaaggtagaaacggaggagaagagcggctcggccttgacccctcccgacaccact
gcagatccaaaggagaagcccaggcaagccagcaagttcgacaagctgccaatcaagatc
gtcaaaaagaacaacctgtttgttgtcgaccgatctgacaagctgggtcgggttcaggag
ttcaccagtggcctcctgcactggcagcttggtggcggggacaccactgagcacatccag
actcactttgagagcaagatggaaattcctccacgcaggcgccctcctccccctctgagc
tccacaggccgaaagaaagagctagaaggaagaggagacgtggaagagcagcaagagaga
agcatcatcgccaccatcgacgatgtcctgtctgcccggccaggagcgctgcccgaagac
gcccaccctggggcccaggcagaaagcagcaagtttccctttggcatccatcaggccaag
agccaccggaacatcaagctgctggaggacgagccgcggagccgcgatgagaccccgctc
tgcaccactgcgcactggcaggattctctggccaagcgctgtatctgtgtgtcaaatatt
gtccgtagcttgtcttttgtgcctggcaatgatgccgaaatgtccaaacatcctggcttg
gtgctgatcctggggaagctgattcttcttcaccatgagcacccggagaggaagcgagca
ccgcagacctacgagaaggaggaagacgaggacaaagggctggcctgcagcaaggacgag
tggtggtgggactgcctcgaggtcttgcgggataacacgttggtcacgctggccaacatt
tccgggcagctagacttgtctgcctacacggaaagcatctgcttgccgattttggatggc
ttgctgcactggatggtgtgcccatctgcagaggcacaagacccctttccaacggtggga
cccaactctgtcctgtcgcctcagagacttgtactggagaccctctgtaaactcagtatc
caggacaacaatgtggacctgatcttggccacgcctccatttagtcgtcaggagaaattc
tatgcgacattagttaggtacgttggggatcgcaaaaacccagtctgtcgagaaatgtcc
atggcgctcttatcgaacctggcccaaggggacacgctggcggcgagggcaatagctgtg
caaaaaggaagcattggaaacttaataagcttcctcgaggatggggtcacgatggcccag
tatcagcagagccagcataacctcatgcacatgcagcccccgcctctagagccaccaagc
gtggacatgatgtgcagggcggccaaggcgctgctggccatggccagggtggacgagaac
cgctcagagttccttctgcacgagggccggttgctggatatctcgatatctgccgtcctg
aactctctggtcgcatctgtcatctgtgatgtactgtttcagattgggcagttatga
DBGET
integrated database retrieval system
