Pteronotus mesoamericanus (Parnell's mustached bat): 129068634
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Entry
129068634 CDS
T09558
Symbol
NXF1
Name
(RefSeq) nuclear RNA export factor 1
KO
K14284
nuclear RNA export factor
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Pathway
ppam03008
Ribosome biogenesis in eukaryotes
ppam03013
Nucleocytoplasmic transport
ppam03015
mRNA surveillance pathway
ppam05014
Amyotrophic lateral sclerosis
ppam05164
Influenza A
ppam05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129068634 (NXF1)
03015 mRNA surveillance pathway
129068634 (NXF1)
03008 Ribosome biogenesis in eukaryotes
129068634 (NXF1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
129068634 (NXF1)
05168 Herpes simplex virus 1 infection
129068634 (NXF1)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
129068634 (NXF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppam03019
]
129068634 (NXF1)
03009 Ribosome biogenesis [BR:
ppam03009
]
129068634 (NXF1)
Messenger RNA biogenesis [BR:
ppam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129068634 (NXF1)
mRNA cycle factors
Stress granule specific factors
129068634 (NXF1)
Ribosome biogenesis [BR:
ppam03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
129068634 (NXF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
UBA_8
LRR_4
LRR_9
LRR_8
Motif
Other DBs
NCBI-GeneID:
129068634
NCBI-ProteinID:
XP_054426986
LinkDB
All DBs
Position
Unknown
AA seq
617 aa
AA seq
DB search
MADGGKSYSEHDDRVSFPQRRKKGRGPFRWKCEGNRRSGRGGTGIRPSRVEEDDRDVAMS
DAQDVPRVRYNPYSARPNRRGDNWHERDRIHVTVRRDRAPAQRGGAGTGQDGTSKNWFKI
TIPYGRKYDKSWLLSMIQSKCSVPFTPIEFHYENTRAQFYVEDASTASALKAVNYKILDQ
ENRRISIIINSSPPPPTILNELKPEQVEQLKLIMSKRFDGSQQALDLKGLRSDPDLVAQN
IDVVLNRRSCMAATLRIIEENIPELLSLNLSNNKLYRLDDMSSIVQKAPKLRILNLSGNE
LKSERELDKIKGLKLAELWLLGNPLCDSFRDQSTYISTIRERFPKLLRLDGHELPPPIAF
DVDAPTILPPCKGSYFGTEALKNLVLHFLQQYYAVYDSGNRQRLLDAYHDGACCSLSIPF
TPQNPARSNLGEYFKDSRNVKKLKDPTLRFRLLKHTRLNVVAFLNELPKTQHDINSFVVD
ISAQTNTLLCFSVNGVFKEVDGKSRDSLRAFTRTFVAVPASNSGLCIVNDELFVRNASPD
ESQRAFAMPAPTPSSSPVPTLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQA
FTHLKAKGEIPEVAFMK
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgggggaaagtcgtacagcgagcatgatgatcgcgttagtttccctcaaaga
agaaagaaaggccggggtcctttccggtggaagtgtgaggggaaccgtcggtctggaaga
ggaggcactggcattcggccttcccgcgtcgaggaagatgacagggatgtggcaatgagt
gatgcccaggatgttccccgcgtaagatacaacccgtattctgcgcgacccaaccgtcgg
ggtgataattggcacgagcgagaccgcattcatgttactgtgcgaagagacagagctcct
gcacagagaggaggggctggcaccgggcaggatgggacctcaaagaactggtttaagatt
acaattccttatggcaggaaatatgacaagtcgtggctcctgagtatgattcagagtaaa
tgcagtgtccctttcacccccattgaatttcactatgaaaacacacgggcccagttttac
gttgaggatgccagtactgcctctgcattgaaagctgtcaactataagattttggatcag
gagaaccgaaggatatctatcatcatcaactcctctcctccgccccctacgatactgaat
gaactcaagccagagcaagtagagcagctaaagcttatcatgagcaaacgatttgatggc
tcccagcaagcacttgacctcaagggcctccgttcagacccagatttggtggcccagaac
attgatgttgtcctgaaccgtagaagctgtatggcggctactctgcgaatcattgaggaa
aacatccctgagctgttgtccttgaacttgagtaacaataagctgtataggctggatgac
atgtccagcattgtgcagaaagcacccaaactaaggatcctaaatctctccggaaatgag
ttgaaatctgagcgggagttggacaagataaaagggctgaagctagcagaactgtggctc
ttagggaaccccctgtgcgacagcttccgagatcagtccacctacatcagcaccattcgt
gaacgattccccaaattattacgcctggacggccatgagttacccccgcccattgccttt
gatgttgacgcccccacgatattaccaccctgcaagggaagctattttggaacagaagcc
ctcaagaatctggtcctgcacttcctgcagcagtactacgcagtctatgactccgggaat
cggcagcggctcctggacgcctaccacgacggggcctgctgctccctgagcatcccgttc
acaccccagaaccccgcccgaagcaacttgggcgagtacttcaaggatagcaggaatgtg
aagaagcttaaagacccgaccctgcggttccggctgctgaagcacacacggctcaacgtt
gttgccttcctcaacgagttgcccaaaactcagcacgacatcaattcctttgtggtggac
ataagcgcccaaactaacacattgctgtgtttttctgtcaatggagtcttcaaagaagtg
gatgggaagtctcgggattctttgcgagccttcacacggacgtttgttgctgttccagcc
agcaattcagggctgtgcatcgtcaacgacgagctgttcgtgcggaacgccagccctgat
gagagccagagagccttcgccatgcctgcgcccacgccctcctccagcccggtgcccacc
ctctccccagagcagcaggagatgctgcaggcgttctccacacagtctggcatgaacctc
gagtggtcccagaagtgccttcaggacaacaactgggactacaccaggtccgcccaggcc
ttcactcatctcaaggccaagggtgaaattccggaagtggcgttcatgaagtga
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integrated database retrieval system
