Pteronotus mesoamericanus (Parnell's mustached bat): 129069980
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Entry
129069980 CDS
T09558
Symbol
CSTF2T
Name
(RefSeq) cleavage stimulation factor subunit 2 tau variant
KO
K14407
cleavage stimulation factor subunit 2
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Pathway
ppam03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129069980 (CSTF2T)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppam03019
]
129069980 (CSTF2T)
Messenger RNA biogenesis [BR:
ppam03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
129069980 (CSTF2T)
U7-dependent histone pre-mRNA processing factors
129069980 (CSTF2T)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
129069980
NCBI-ProteinID:
XP_054428763
LinkDB
All DBs
Position
Unknown
AA seq
629 aa
AA seq
DB search
MSSLAVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGPAAPIIDSPYGDPID
PEDAPESITRAVASLPPEQMFELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMR
IMDPEIALKILHRKIHVTPLIPGKSQAVSGPVPGPVSGPGPGPGLCPGPNVLLNQQNPPA
PQPQHLARRPVKDIPPLMQTPIQGGIPAPGPMPAAVPGPGPGSLTPGGAMQPQVGMPGVG
PVPLERGQVQMSDPRAPMPRGPMTAGGLPPRGLLGDAPNDPRGGTLLSVTGEVEPRGYLG
PPHQGPPMHHAPGHDSRGPSSHEMRGGPLGDPRMLIGEPRGPMIDQRGLPLDGRGSRDSR
GMETRAMETEVLETRVMERRGIETCAMETRGMEARGMDGRGMEIRGPGPSSRGPMASGIQ
GPGPINMGAGGPQGPRQVPSISGVGNPGAGMQGAGMQGAGMQGAGMQGAGMQGAGMQGAG
MQGAGMQGAGMQGAGMQGAGMQGAGKQGGGQPSSFSPGQSQVTPQDQEKAALIMQVLQLT
ADQIAMLPPEQRQSILILKEQIQKSTGAS
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtttggcggtgagagacccggcaatggatcgatcactgcgttctgtgttcgtg
ggaaacattccgtatgaggcaactgaggagcagctaaaggacattttttcggaggttggt
tctgttgtcagtttccggctggtatacgatagagagacgggaaaacccaagggttatggc
ttctgtgagtaccaagaccaggagaccgcgcttagtgccatgcgtaacctgaatgggcgg
gagttcagcggcagagcgctgcgggtggacaatgctgccagtgaaaagaacaaggaggag
ttaaagagcttagggcctgccgcgcccatcattgactcaccctatggggaccccatcgat
ccggaagatgcccctgagtcaattaccagggcagtcgctagtctccccccggagcagatg
tttgagctgatgaagcagatgaagctctgtgtccaaaacagccaccaggaagctcgaaac
atgttacttcaaaaccctcaactggcttatgcgctgttgcaggcccaagttgtgatgaga
atcatggatccagagattgctctgaaaattctgcatcgcaagatacatgttacgccactg
attccaggcaaatctcaggctgtctctggccctgtccctggccccgtctctggccctggc
cctggccctgggctctgcccaggacctaatgttttgctgaaccagcagaatcctccagct
cctcagcctcagcatttggctagaagacctgtgaaagacattcctccactgatgcagacc
cctatccagggtggaattccggccccggggcccatgccagccgccgttcctggacctggc
cctggttccttaactcctggcggagctatgcagccccaagttggaatgccaggggttggt
ccagtgcctttagagcgggggcaggtgcagatgtcagatcctagagcacctatgcctcgt
ggacccatgactgctggtggactacctcctcgaggactgttaggagacgctccaaatgac
ccacgtggagggactttgctttctgtcaccggagaagtcgagcccagaggctatcttggg
ccaccccatcagggtcctcccatgcaccatgcccctggtcatgacagccgtggcccttcc
tcacatgagatgaggggagggccattaggcgaccccagaatgctaattggagagccaaga
ggacccatgatagatcaaaggggtctacctctggatggtagaggtagtagagactctcga
gggatggagacccgagccatggaaactgaggtcttagagacacgagtgatggagagaaga
gggatagagacctgtgcaatggaaaccagaggaatggaagcaagaggcatggatggaaga
ggaatggagatacgaggccctggccccagttcgagaggccccatggccagtggaatccag
ggtcctggtcccattaatatgggagcaggtggtcctcagggacccagacaggtcccaagc
atttcaggagtgggaaatcctggagcgggcatgcaaggagcgggcatgcaaggggcaggc
atgcagggagcaggcatgcaaggagcgggcatgcagggggctggcatgcaaggagcgggc
atgcagggggctggcatgcaaggagcgggcatgcagggggctggcatgcagggagcgggc
atgcagggggctggcaagcaaggtggaggccagcctagcagttttagtcctgggcagagc
caagtaactccacaggatcaagaaaaggcagctttgatcatgcaggttcttcaactgact
gcagatcaaattgccatgctgcctcctgagcaaaggcagagtatcctgattttaaaggag
caaatccagaaatctactggagcttcttga
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integrated database retrieval system
