Pteronotus mesoamericanus (Parnell's mustached bat): 129070214
Help
Entry
129070214 CDS
T09558
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Pathway
ppam03040
Spliceosome
ppam05202
Transcriptional misregulation in cancer
ppam05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129070214 (DDX5)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
129070214 (DDX5)
05205 Proteoglycans in cancer
129070214 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppam03041
]
129070214 (DDX5)
03009 Ribosome biogenesis [BR:
ppam03009
]
129070214 (DDX5)
Enzymes [BR:
ppam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129070214 (DDX5)
Spliceosome [BR:
ppam03041
]
Complex A
U1 snRNP components
U1 related factors
129070214 (DDX5)
Complex B
129070214 (DDX5)
Ribosome biogenesis [BR:
ppam03009
]
Eukaryotic type
Pre-60S particles
Helicases
129070214 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
129070214
NCBI-ProteinID:
XP_054429010
LinkDB
All DBs
Position
Unknown
AA seq
614 aa
AA seq
DB search
MSGYSSDRDRGRDRGFGAPRFGGSRAGPLSGKKFGNPGEKLVKKKWNLDELPKFEKNFYQ
EHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANIMDVIARQNFTEPTAI
QAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELA
QQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLR
RTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHI
NIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRK
MRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPN
SSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVEDRGS
GRSRGRGGMKDDRRDRYSAGKRGGFNTFRDRENYDRGYSSLLKRDFGAKTQNGVYSATNY
TNGSFGSNFVSAGIQTSFRTGNPTGTYQNGYDSTQQYGSNVPNMHNGMNQQAYAYPATAA
APMIGYPMPTGYSQ
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggctattcgagtgaccgagaccgcggccgggatcgagggtttggtgcacctcga
tttggaggaagtagagcagggcctctatcaggaaagaagtttggaaaccctggggagaaa
ctagttaaaaagaagtggaatcttgatgagctgcccaaatttgagaagaatttttatcaa
gaacaccctgatttggccaggcgcacagctcaagaggtagagacatacagaagaagcaag
gaaattacagttagaggtcacaactgcccaaagccagttctgaatttctacgaagcaaac
ttccctgcaaacatcatggatgtgattgcaagacagaacttcactgaacccactgctatt
caagctcagggatggccagttgctctaagcggattagatatggttggagtagcacagact
ggatctgggaaaacattgtcttatttgctgcctgccattgtccacatcaatcatcagcca
ttcctagagagaggtgatgggcctatttgcttggtgctggcaccgactcgggaactggcc
cagcaggtgcagcaagtagctgctgagtattgcagagcgtgtcgattgaagtctacttgc
atctatggtggtgctcccaagggaccacagatacgtgatttggagagaggtgtggaaatt
tgtattgcaacacctggaagactgattgactttttggagtgtgggaaaacaaatctgaga
agaactacttatcttgtccttgatgaagcagacagaatgcttgatatgggcttcgaaccc
caaataaggaagattgtggatcagataagacctgacaggcaaaccctaatgtggagtgca
acttggccaaaagaagtaagacagcttgctgaagatttcctgaaagactatattcatata
aacattggtgcactggaactgagtgcaaaccacaacattcttcagattgtggatgtgtgt
catgatgtagaaaaggatgaaaaacttattcgtctgatggaagagattatgagtgagaag
gagaataaaaccattgtcttcgttgaaaccaaaagaagatgtgatgaacttactagaaaa
atgaggagagacgggtggcctgccatgggtatccatggtgataagagtcaacaggaacgt
gactgggttctaaatgaattcaaacatggaaaagctcctattctgattgctacagatgtg
gcctccagagggctagatgtggaagatgtgaaatttgtcatcaattatgactaccctaac
tcctcagaggattatattcatcgaattggaagaactgctcgcagtaccaaaacaggcaca
gcatacactttctttacacctaataacataaagcaagtgagcgaccttatctctgtgctt
cgtgaagctaatcaagcaattaaccccaagttgcttcagttggttgaagacagaggttca
ggtcgttccaggggtagaggaggcatgaaggatgaccgtcgggacagatactctgcgggc
aaaaggggtggatttaatacctttagagacagggaaaattatgacagaggttactctagt
cttcttaagagagattttggggcaaaaacccagaatggtgtttacagtgctaccaattac
accaatgggagctttggaagtaattttgtgtctgctggtatacagaccagttttaggact
ggtaatccaacagggacttaccagaatggttatgatagcactcagcaatatggaagtaat
gttccaaatatgcacaatggtatgaaccaacaggcatatgcatatcctgctactgcagct
gcgcctatgattggttatccaatgccaacaggatattctcagtaa
DBGET
integrated database retrieval system
