Pteronotus mesoamericanus (Parnell's mustached bat): 129070357
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Entry
129070357 CDS
T09558
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Pathway
ppam03030
DNA replication
ppam03420
Nucleotide excision repair
ppam03430
Mismatch repair
ppam03440
Homologous recombination
ppam03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
129070357 (RPA1)
03420 Nucleotide excision repair
129070357 (RPA1)
03430 Mismatch repair
129070357 (RPA1)
03440 Homologous recombination
129070357 (RPA1)
03460 Fanconi anemia pathway
129070357 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppam03000
]
129070357 (RPA1)
03032 DNA replication proteins [BR:
ppam03032
]
129070357 (RPA1)
03400 DNA repair and recombination proteins [BR:
ppam03400
]
129070357 (RPA1)
Transcription factors [BR:
ppam03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
129070357 (RPA1)
DNA replication proteins [BR:
ppam03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
129070357 (RPA1)
DNA repair and recombination proteins [BR:
ppam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
129070357 (RPA1)
MMR (mismatch excision repair)
129070357 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
129070357 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
Ubiquitin_At1g33420
Motif
Other DBs
NCBI-GeneID:
129070357
NCBI-ProteinID:
XP_054429295
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MVGHLSEGAIAAIMQQGDTSIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLAT
QLNPLVEKEQLSSNCICQINRFIVNTLKDGRRVVILMELEVLKSADAVGGKIGNPVPYNE
GHGQQQVAASPASAASPPTSKPQQQNGSSGMGSTVSNPYGASKIFGKAGGASLASSSGGT
QAKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIELVDESGEIRATAFND
QADKFFPLIDVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETAVLPCEDGRNLPTVQF
DFTKIDDLESKPKDSLVDIIGICKSYEDATKITVKANNREVSKRNIYLMDMSGKVVSTTL
WGEDADKFDGSRQPVMAIKGARVSDFGGRSLSVLSSSTVIVNPDIPEAYKLRGWFDSEGQ
ALDGVSISDLKSGGTAGSSTNWKTLYEVKSENLGQGDKADYFSSVATVVYLRKENSMYQA
CPTPDCNKKVIDQQNGLYRCEKCDQEFPNFKYRMILSVNIADYQDNQWVTCFQESAEAIL
GQSAAYLGELKEKNEQAFEEIFQNANFRSFIFKIRVKLETYNDESRIKATVMDVKPVDYR
EYSKRLIMNIRRNAAL
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggtgggccacctgagcgaaggggccattgcggccataatgcaacagggagatacatcc
ataaaacccatcctccaagtcattaacatccgtcccattactacagggaatagtccaccc
cgttatcgactgcttatgagtgatgggttgaacactctgtcctctttcatgttggcaaca
cagttgaaccctcttgttgaaaaagaacaattgtctagcaactgtatttgccagattaac
cgatttattgttaacacgctgaaagatggaaggagagtagttattttgatggagttagag
gttttaaaatcagcagacgcagttggaggaaagattggcaatccagtgccctataatgaa
ggacacgggcagcagcaggtagctgcttctccggcctcagcagccagtccaccaaccagc
aagccccagcaacagaatgggagctcaggaatgggttccactgtatccaacccttatggt
gcctcaaagatatttggaaaagccggaggagcgagcctcgcgagcagttccgggggcaca
caggccaaggtggtgcccattgccagcctcaccccttaccagtccaagtggactatttgt
gctcgtgttaccaacaaaagtcagatccgtacctggagcaattcccgaggggaggggaag
cttttctctatagaactagtcgatgaaagtggtgaaatcagagctactgctttcaacgac
caagccgacaagttcttccccctcattgacgtgaataaggtctattatttctctaaaggc
accctgaagattgctaacaaacagttcacagctgttaaaaacgactatgagatgaccttc
aataatgagactgctgtcctgccctgtgaagacggtcgtaatttgcctaccgttcagttt
gatttcacaaagattgatgacctagagagcaaaccgaaggactcgcttgtagacataatc
gggatctgcaagagctatgaagatgccacgaaaatcacagtgaaggctaacaacagagaa
gtttctaagagaaatatctatttgatggacatgtcagggaaagtggtgtctactactctg
tggggagaagatgctgacaaatttgatggttccagacaacccgtgatggctatcaaaggg
gccagagtgtctgattttggtggacggagcctctctgtactgtcttcaagcacagtcatt
gtgaaccctgacatcccagaggcctataagcttcgtggatggtttgactcagaaggacaa
gcgttagatggtgtttccatctcagatctaaagagtggaggaacagccggaagcagcacc
aactggaagaccttgtatgaggttaaatcggagaacctgggtcaaggtgacaaggcagac
tacttcagctccgtggcgacagtggtatatcttcgcaaagagaattcgatgtatcaggcc
tgcccgactccggactgcaataagaaagtgattgatcagcagaatggattataccgctgt
gagaagtgcgaccaggaatttcccaattttaagtaccgcatgatcctgtcagtgaatatt
gccgattatcaagacaatcagtgggtcacctgcttccaggagtctgcagaggccatcctg
ggtcagagcgcggcctacctgggcgagttaaaggagaagaacgagcaagcatttgaggaa
atcttccagaatgccaactttcgatctttcatattcaagatcagggtcaaactagagacc
tacaatgatgagtctcgaatcaaggccaccgtgatggacgtgaagcccgtggactacaga
gaatatagcaaaaggttgatcatgaacatcaggagaaatgcagcactgtga
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integrated database retrieval system
