Pteronotus mesoamericanus (Parnell's mustached bat): 129071214
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Entry
129071214 CDS
T09558
Symbol
COL4A1
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Pathway
ppam04151
PI3K-Akt signaling pathway
ppam04510
Focal adhesion
ppam04512
ECM-receptor interaction
ppam04820
Cytoskeleton in muscle cells
ppam04926
Relaxin signaling pathway
ppam04933
AGE-RAGE signaling pathway in diabetic complications
ppam04974
Protein digestion and absorption
ppam05146
Amoebiasis
ppam05165
Human papillomavirus infection
ppam05200
Pathways in cancer
ppam05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
129071214 (COL4A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129071214 (COL4A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129071214 (COL4A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
129071214 (COL4A1)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
129071214 (COL4A1)
09154 Digestive system
04974 Protein digestion and absorption
129071214 (COL4A1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
129071214 (COL4A1)
09162 Cancer: specific types
05222 Small cell lung cancer
129071214 (COL4A1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
129071214 (COL4A1)
09174 Infectious disease: parasitic
05146 Amoebiasis
129071214 (COL4A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
129071214 (COL4A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppam04147
]
129071214 (COL4A1)
00536 Glycosaminoglycan binding proteins [BR:
ppam00536
]
129071214 (COL4A1)
Exosome [BR:
ppam04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
129071214 (COL4A1)
Glycosaminoglycan binding proteins [BR:
ppam00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129071214 (COL4A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
129071214
NCBI-ProteinID:
XP_054430369
LinkDB
All DBs
Position
Unknown
AA seq
1669 aa
AA seq
DB search
MGPRLGVWLLLLPAALLLHEERSRAAAKGGCAGSGCGKCDCHGVKGQKGERGLPGLQGVI
GFPGMQGPEGPQGPPGQKGDTGEPGLPGTKGTRGPPGVSGYPGNPGLPGIPGQDGPPGPP
GIPGCNGTKGERGPLGPPGLPGFTGHPGPPGLPGMKGDPGEILGHVPGTLLKGERGFPGP
PGTPGIPGLPGVQGPVGPPGFIGPPGPPGPPGPPGEKGQMGLSFQGPKGDKGDQGVSGPP
GVPGQAQVKEKGDYATKGEKGQKGEPGVQGITGFGEKGEPGKQGPRGKPGKDGEKGEKGS
LGFPGDLGLPGLPGREGFKGDKGDAGPPGPPGTVVGPAPIGEKGEKGYPGSPGSRGEPGL
KGFPGLPGQPGPPGVSIPGQPGVPGYPGERGEKGDQGLPGVSLPGPSGRDGLQGPPGPPG
LPGRPGHTNGIVECQPGPIGDRGPPGIPGQPGLAGEVGEKGQKGDSCLVCDTTGLRGPPG
PQGPPGETGFPGQPGAKGEKGLPGRDGLEGVPGPQGTPGLMGHPGAKGEPGDIYFDIQLK
GDKGDPGFPGQPGMPGRAGTPGRDGHPGLPGPKGSPGSIGLKGDRGPPGGVGFPGSRGDI
GPPGPPGYGPVGPVGDKGQAGFPGSPGSPGQPGPRGETGRVVPLPGPPGADGLPGSPGFQ
GPQGDRGFPGAPGRPGVPGERGAVGQPGIGFPGPPGPKGVDGLPGDAGLPGSPGRPGSNG
LPGSPGRPGQKGEPGIGLPGPKGLPGLPGIPGTPGEKGNIGGPGIPGEHGAVGPPGLQGI
RGDPGPPGLPGPKGAPGVPGVGPPGVMGPPGRQGPPGSSGPPGVKGEKGFPGFPGLDMPG
PKGDKGSQGLPGLQGQSGLPGLPGQQGAPGLPGFQGPKGEMGVMGTPGQPGSPGPAGVPG
LPGEKGDHGFPGSSGPRGDPGSKGEKGDIGLPGQPGSVDTLHMGSMKGQKGEQGEKGQTG
PSGDKGARGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGRPG
VPGEKGVPGVPGLQGIPGSPGEKGTKGEKGQAGQPGIGIPGLPGAKGDQGIAGFPGSPGE
KGEKGSSGLPGMPGSPGPKGAPGTVGYPGSPGLPGGKGDRGPPGLDGIPGAKGEPGLPGQ
PGPTGPAGQKGEPGSDGIPGSAGEKGEPGLPARGFPGFPGSKGEKGSKGEVGFPGLAGSP
GIPGSKGDQGFMGPPGPQGQPGLPGAPGRPVEGPKGDRGPQGQPGLPGPPGPMGPPGLPG
LDGLKGDKGSPGWPGTPGAPGPKGDLGFQGMPGIGGSPGITGAKGDMGPPGVPGFQGPKG
LPGLQGIKGDPGDQGFPGTKGLPGPPGPPGPYHIIKGEPGFPGPEGPAGMKGIQGPPGPK
GQQGVTGSVGLPGPPGIPGFDGAPGQKGEPGPFGPPGPRGFPGPPGPDGLPGSMGPPGTP
SVDHGFLVTRHSQTIDDPQCPPGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTM
PFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPISGENIRPFISRCAVCEAPAMVMAV
HSQTIQIPPCPNGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRG
TCNYYANAYSFWLATIERSEMFKKPTPSTLKAGELSTHVSRCQVCMRRT
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atggggccccggctcggcgtctggctgctgctgctgccagcagcccttctgctccacgag
gagcgcagccgggccgctgcgaagggtggttgtgctggctctggctgtgggaaatgtgac
tgccatggagtgaagggacaaaagggtgaaagaggcctcccaggattacaaggtgtcatt
ggatttccaggaatgcaaggacctgaggggccgcaggggccacctggacaaaagggtgac
actggagaaccaggtctgccgggaacaaaagggacaaggggccctccaggagtatcgggc
taccctggaaacccaggactcccgggtattcctggacaagatggtccaccaggtccccca
ggtatcccaggatgcaacgggacaaagggtgagcgagggcctctgggacctcctggtctg
cctggattcactggacatcctggaccacctggcttaccaggaatgaagggggatcctggt
gagatacttggccatgtgccagggacactgttgaaaggtgaaagaggatttcctggaccc
ccaggaacaccaggtataccaggattgccaggggtacaaggtcctgttggccctccagga
tttattggaccaccaggtcccccaggccctcctggccctccaggtgaaaaggggcaaatg
ggcttaagttttcaaggaccaaaaggtgacaagggtgatcaaggggtcagtggacctcca
ggagtgccaggacaagctcaagttaaagagaaaggggactatgccactaaaggagagaag
ggtcaaaaaggtgaacctggagttcagggaattacagggtttggagagaaaggtgaacct
ggaaaacaaggacctcgaggaaaacctggaaaagatggtgaaaaaggagaaaaagggagt
ctagggttccccggcgacttggggttgccaggactcccgggccgagagggttttaaggga
gacaaaggtgatgcaggtcctcctggcccacctggaactgttgtcggcccagcacccatt
ggagaaaaaggcgaaaaggggtacccagggtctcccgggtcgagaggagagccaggcctg
aaaggtttcccaggattaccaggccagccaggccccccgggcgtctcgatacccgggcag
cctggtgttcctggctaccctggtgaaaggggagaaaaaggtgaccaaggacttccaggg
gtgtccttgccaggaccaagtggaagagatggactccagggccctcctgggccccccgga
cttcctggacggccaggccacacgaatggaattgtggagtgccagcctggacctatagga
gatcggggtcctcctggaattccagggcagccaggattggcaggagaagttggagagaaa
ggtcaaaaaggagacagttgtcttgtctgtgacacaacaggacttcgtggacctcctggg
ccccagggacccccaggagaaacaggtttcccagggcagccaggggccaagggtgaaaaa
ggtttacctggcagggatggtctggaaggagtgcctggccctcaaggtacaccagggctg
atgggccacccaggagccaagggagagcctggcgacatttactttgacattcaactcaaa
ggtgacaagggagacccaggttttccaggacagcccggtatgcctggcagagcagggact
cccggaagagatggccatccaggtctgcctggccccaaaggctccccgggctcaatagga
ttaaaaggagaccgtggcccccccggaggagttggatttcctggcagtcgtggtgacatc
ggccctcctggacctccaggatatggcccagttggccctgtgggtgacaaaggacaagcg
ggctttccgggaagccctggatccccaggccagccaggtcccaggggtgaaacaggaaga
gtcgtgcctttacctggtccccctggagcagatggacttccgggttccccaggtttccaa
ggaccccaaggtgaccgaggtttccctggggccccgggaaggcctggcgtcccaggagag
aggggtgctgttggccagccgggaattggctttccaggacctccaggccccaaaggtgtg
gatggtttacctggagatgcgggacttcctgggagtccaggtcgcccgggatctaatggc
ttacctggcagcccaggtaggcccggccagaagggagagcctggaattggcctgccagga
cccaaaggattgccaggtcttccaggcattcccggcacacctggggagaagggaaacatc
ggaggaccaggcattcctggagagcatggagcagtcgggccccctggccttcagggaatc
agaggtgacccaggacctcctggattaccaggtcccaaaggagctccgggagttcctgga
gttggtccccctggagtgatgggccctcctggaagacagggaccacctgggtcatcaggt
cctcctggagtgaaaggagagaaaggcttccccggatttccaggcttggacatgccgggc
cccaaaggagataaagggagtcaagggcttcccggcctccagggacagtcagggctgcct
ggtcttcctggacagcagggggcaccaggacttcctgggtttcaaggtcccaagggagag
atgggcgtcatggggactccggggcagcctggctctccaggacccgcgggtgtgccagga
ttgccgggtgaaaaaggggaccatggcttcccaggctcctcaggacccaggggagaccct
ggctcaaagggggagaaaggagatatcggtctccctggacagcctgggtccgtggacaca
ctgcacatgggcagcatgaagggtcagaagggagaacaaggagaaaaaggacaaactgga
ccaagtggtgataaaggagctcgaggagaccctggaactccaggagtgcctggaaaggac
ggccaagcggggcaacctggccagccaggacctaaaggtgatccaggcataagcggaacc
ccaggtgctccaggacttcctggaccaaaaggatcggttggtggaatgggccggccagga
gtacctggagagaaaggtgtgcctggagtccctggcttgcaggggatccctggatcacct
ggagagaaaggaacaaaaggggagaaagggcaggcaggccaacctggcattggaattcct
ggactacctggggcaaagggagatcaaggcattgcaggttttccaggaagtcctggagag
aagggagaaaaaggaagcagtgggctcccaggcatgcctgggtctccgggccccaaagga
gcaccaggaactgttggctatccaggaagccctgggttgcctggaggaaaaggtgacaga
ggccctccgggactggatggcattcctggtgccaaaggagaaccaggtcttcctgggcag
cctggcccaacgggcccagccggccagaaaggggaacccggcagtgatggaattccaggg
tcggcaggagagaagggcgaaccaggtctacccgcaagaggattccccgggtttccaggg
tccaaaggagagaaaggttcaaagggtgaggtgggtttcccaggattagctgggagccca
ggaattcctggatctaaaggagaccaaggattcatgggtcctccggggccacaaggacag
ccgggattgcctggtgctccaggccgtcctgtggaggggcccaaaggcgaccggggccca
cagggacaacctggcctgccagggcctccgggaccaatggggcctccagggctccccggg
cttgatggattgaaaggtgacaaaggaagcccaggctggccagggactcctggtgctcca
ggacccaagggagaccttggattccaaggcatgcctgggattggtggctctccaggaatt
acaggtgctaagggtgatatgggacctccaggagttccaggttttcaaggtccaaaaggt
ctccctggccttcagggaattaaaggagacccaggggaccaaggtttccctggaactaaa
ggtctccccggtccccctggacctccaggtccttaccatatcatcaaaggagagccaggg
ttccctggtcctgagggtcctgccggtatgaaaggaattcagggacctccaggccccaaa
ggacagcaaggtgtgacagggtcagtgggcttacctggtccaccaggtattcctgggttc
gatggtgcccctggccagaaaggagagccgggaccctttggacctcctggtcctagaggg
tttccaggaccaccaggccctgatggtttgccaggatcgatgggtcccccaggcactcca
tctgttgatcacggcttccttgtgaccaggcacagtcaaacaatagatgatccacagtgt
cctcctgggaccaaaattctttaccatgggtactctttgctctatgtgcaaggcaatgaa
cgggcccacggacaggacttaggcacggctggaagctgcctgcgcaagttcagtacgatg
cccttcctgttctgcaatatcaacaacgtctgcaacttcgcctcccgaaatgattattcc
tactggttgtccactccggagcccatgccaatgtctatggcacccatctctggggaaaat
attagaccgtttattagcaggtgtgcggtgtgtgaggcgccagccatggtgatggccgta
cacagccagacgattcagatccccccgtgccccaacgggtggtcctcgctctggattggc
tattcctttgtgatgcacaccagcgctggggctgaaggttctggccaagctcttgcatcc
ccggggtcctgtctggaagagtttagaagtgcgccattcatcgagtgccacggccgtggg
acttgtaattactatgcaaatgcttacagcttttggcttgccactatagagagaagtgag
atgttcaagaagcccacgccgtccaccttgaaggctggggagctgagcacgcatgtcagt
cgctgtcaagtctgtatgagaagaacataa
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integrated database retrieval system
