Pteronotus mesoamericanus (Parnell's mustached bat): 129073351
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Entry
129073351 CDS
T09558
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Pathway
ppam03013
Nucleocytoplasmic transport
ppam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129073351 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
129073351 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppam03019
]
129073351 (THOC2)
03041 Spliceosome [BR:
ppam03041
]
129073351 (THOC2)
Messenger RNA biogenesis [BR:
ppam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
129073351 (THOC2)
Spliceosome [BR:
ppam03041
]
Complex C
Other components
EJC/TREX
129073351 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
129073351 (THOC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
129073351
NCBI-ProteinID:
XP_054432960
LinkDB
All DBs
Position
Unknown
AA seq
1596 aa
AA seq
DB search
MAAATVLVPVEWIKNWEKSGRGEFLHLCRILSENKSHDSSTYRDFQQALYELSYHVIKGN
LKHEQASNVFNDISEFREDLPSILADVFCILDIETNCLEEKGKRDYFTQLVLACLYLVSD
TVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELG
QDLSGNITSDLILENIKSLIGCFNLDPNRVLDVILEVFECRPEHDDFFISLLESYMSMCE
PQTLCHILGFKFKFYQEPNGETPSSLYRVAAVLLQVNLIDLDDLYVHLLPADNCIMDEHK
REIVEAKQIVRKLTMVVLSSEKIDEREKEKEKEEEKVEKPPDNQKLGLLEALLKIGDWQH
AQNIMDQMPPYYAASHKLIALAICKLIHITIEPLYRRVGVPKGAKGSPVNALQNKRAPKQ
AESFEDLRRDVFNMFCYLGPHLSHDPILFAKVVRIGKSFMKEFQSDGSKQEDKEKTEVIL
SCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQHRYRLYGQWKNETYNSHPLLVK
VKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDS
LKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIDLAGL
LQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIR
NTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQF
GGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKSEKGS
KQQHKVHKYITSCEMVMAPVHEAVVSLHVSKVWDDISPQFYATFWSLTMYDLAVPHTSYE
REVSKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQMEHVQRVLQRLKLEK
DNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCARFVELVHQQKTPNFSTLLCYDRV
FSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRATYEKECGNYPGFLTILRATGFD
GGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNL
GQALERRVHKICQEEKEKRPDLYALAMGYSGQLKSKKSYMIPENEFHHKDPPPRNAVASV
QNGPGGGSSSSSIGSASKSDESSAEENDKSRERAQCGVKAVNKASSATPKGNSSNGNSGS
NSSKAIKENDKEKGKEKEKEKREKTPATTPEARVLGKDGKEKPKEERPNKDEKARETKER
TPKSDKEKEKFKKEEKTKDEKFKTTVPNVESKSTQEKEREKEPSRERDIAKEMKSKESVK
GGEKTPVSGSLKSPVPRSDATEPEREQKRRKIDTHPSPSHSSTVKDSLIELKESSAKLYL
NHTPSPLSKSKEREMDKKDLDKSRERSREREKKDEKDRKERKRDHSNNDREVLPDLTKRR
KEENGTMAVSKHKSESPCESPYPNEKDKEKNKSKSSSKEKGGDSFKSEKMDKISSSGKKE
SRHDKEKIEKKEKRDSSGGKEEKKQYPFHLIDAFNQ
NT seq
4791 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcaacggtgttggttcccgtagagtggataaagaactgggagaaatcaggg
agaggcgaatttttgcatttatgtcggatcctcagtgaaaataaaagccatgatagttcg
acttacagagatttccagcaagctctctatgaattatcataccatgtgattaaaggaaat
ctaaagcatgaacaagcatctaatgtttttaatgacattagtgaatttcgtgaggatcta
ccctccattcttgctgatgtgttctgcatattagatattgagacaaattgtttagaagaa
aaaggcaagagagactattttacacaattggtattagcgtgtttgtatttagtttcagac
acagttctaaaggaacgcctggatccagaaacattggaatcattagggcttataaaacaa
tcacagcaattcaatcaaaaatcagttaaaatcaagacaaaactcttttataagcaacaa
aaattcaatttgttaagagaagagaatgaaggctatgccaagctgattgctgaactgggg
caagatttatcaggaaatattaccagtgatttaatcttagaaaatatcaagtctttaata
ggatgctttaatctggatcccaatagagttttggatgtcattttagaagtgtttgaatgc
aggccggaacatgatgacttctttatatctttattagaatcttacatgagtatgtgtgaa
ccgcaaacactgtgtcatattcttgggttcaaattcaagttttaccaggaaccaaatgga
gagactccttcatctttatacagagttgcagcagtgcttctacaagttaatctgattgat
ttagatgatctctatgtacatcttcttccagctgataattgcattatggatgaacataaa
cgagaaattgtggaagctaagcaaattgttagaaaacttacgatggttgtattgtcttct
gaaaaaattgatgagcgagagaaagaaaaggaaaaagaagaggagaaagtagaaaagcca
cctgacaaccaaaaacttggtttgttggaagccttattaaagattggtgattggcagcat
gcacagaacattatggatcagatgcctccatactatgctgcttcacataagctaatagct
cttgctatttgcaagctcattcatataactattgagcctctctacagaagggttggtgtt
ccaaaaggtgctaaaggctcacctgttaatgctttgcaaaataagagagcaccaaaacaa
gcagagagctttgaagatttgaggagagatgtcttcaatatgttctgttaccttggtcct
cacctttctcacgatcccattttatttgcgaaagtggtgcgcataggcaaatcatttatg
aaggagtttcagtctgatggaagcaaacaggaagataaagagaaaacggaagttatcctt
agctgtttgcttagcattactgaccaggtactacttccatctctttctttgatggactgc
aatgcttgtatgtctgaggaattatggggaatgtttaaaacgtttccatatcagcacaga
taccgtctgtatggccagtggaagaatgaaacttataacagtcacccacttttagtaaaa
gttaaagctcaaacaatagacagagccaaatatatcatgaagcgtctaaccaaggaaaat
gtaaagccttctggaagacaaattgggaagttgagccacagtaatccaaccattttgttt
gattatatcttgtcacagatacagaagtatgataatttaataacacctgtagtagattca
ctgaaatacctcacttcattgaattatgatgtcttggcctattgtatcattgaagcttta
gctaatccagagaaggagagaatgaaacatgatgacacaaccatctcaagctggcttcag
agtctggctagtttctgtggtgcagtttttcgtaaatatcccattgatcttgctggtctt
cttcaatatgtggctaatcagctaaaggcgggcaaaagttttgacctgcttatattgaaa
gaagtggtacaaaaaatggcaggaatagaaattacagaggaaatgacaatggagcaacta
gaggccatgactggtggagagcaactaaaagctgagggtggttattttggccagatcaga
aacactaaaaaatcttcccagagactaaaggatgctctattggatcatgatcttgctctt
cctctctgtttgcttatggctcaacagaggaatggggtgatctttcaggaaggtggagag
aaacatttgaaacttgtgggaaagctgtatgatcagtgtcacgataccctggtacagttt
ggtgggtttttagcatctaatctaagcacagaagattatataaagcgagtgccttcaatt
gatgtgctttgtaatgaatttcatacaccccatgatgcagcatttttcctgtctaggcca
atgtatgcccaccatatttcatccaagtatgacgaacttaaaaaatcagaaaagggaagt
aaacagcaacataaagttcacaagtatattacatcatgtgaaatggtgatggcccctgtc
catgaagcagtggtctctttacatgtttccaaagtctgggatgacatcagccctcaattc
tatgccacattctggtcattgacaatgtatgaccttgcagttccacacaccagctatgaa
cgggaagtcagtaaacttaaagtccagatgaaagcaattgatgacaatcaagaaatgcct
ccgaataaaaagaaaaaagagaaggagcgctgtactgcccttcaggacaagcttctagaa
gaagaaaagaaacagatggagcatgtgcagcgagttctacagagactgaaactggaaaaa
gacaactggcttttagcaaaatctaccaaaaatgagaccatcacaaaatttctacagctg
tgtatatttcctcgatgtattttttcagcaattgatgctgtttactgtgctcgttttgtt
gaattggtacaccaacagaaaactccaaatttttccacacttctttgttatgatcgagta
ttttctgacataatttacacagttgcaagctgcactgaaaatgaagctagtcgatatggg
agatttctttgctgtatgttagagactgtaaccaggtggcacagtgatagagctacatat
gaaaaggaatgtggaaattatccaggatttcttactatattacgggcaactggattcgat
ggtggaaataaagctgatcaattagactatgaaaattttcgacatgttgtacacaaatgg
cattacaaactaaccaaggcatcggtgcattgccttgaaacaggcgaatatactcatatc
aggaatatcttgattgtgctaacaaaaatacttccttggtacccaaaagttttgaatctg
ggtcaggctctggaaagaagagtacataaaatctgccaagaagaaaaagagaagaggcct
gatctatatgcattggctatgggctactctgggcagttgaaaagtaaaaagtcatacatg
atacctgaaaatgagtttcatcacaaagacccccctccgaggaatgcagttgccagtgta
caaaatgggcctggtggtgggtcttcatcatcatcaataggaagtgcatctaagtccgat
gagagcagtgctgaggagaatgataaatcaagggagagagctcagtgtggtgtgaaagct
gttaataaagcttctagtgccacaccgaaagggaattcaagcaatggaaatagtggctct
aacagcagcaaagccattaaagaaaatgacaaagaaaaagggaaagagaaagaaaaggaa
aaaagagaaaagactccagctactactccagaggccagggtacttggtaaagatggtaaa
gaaaaaccgaaggaagaacggccaaataaagatgaaaaagcgagagagacgaaggaaaga
acacctaagtccgacaaagagaaagaaaaattcaagaaggaagaaaaaactaaagatgag
aaattcaagaccactgtccccaatgtagaatcaaaatcgacccaagagaaggaaagagag
aaggagccatccagagagagagatatagcaaaggaaatgaaatcaaaggaaagtgttaaa
ggcggagaaaaaacaccagtttctgggtccttgaagtcacctgttccccgatcagatgct
actgagcctgaaagggaacaaaaacgccgcaaaattgatacccacccttctccatcacat
tcctcaacagtaaaggacagtctcatcgaactcaaggagtcttcagcaaagctctacctt
aatcatactccttcaccactgtccaagagtaaggagagagaaatggacaagaaagatttg
gacaagtcaagggaaagatccagagaaagagagaaaaaagatgaaaaggacaggaaagaa
cggaaaagggatcactcaaacaatgaccgtgaagtgctaccggacttaaccaagaggcga
aaagaggaaaatggaacaatggcagtttcaaaacacaaaagtgaaagtccatgtgaatct
ccttatccaaatgagaaagacaaggaaaaaaataagtcaaaatcttcaagcaaagaaaaa
ggcggtgattcatttaagtctgaaaaaatggataaaatctcctccagtggcaaaaaggag
tccaggcatgataaagaaaagatagaaaagaaagagaaacgggacagttcaggaggaaag
gaagagaagaaacaatatccttttcatcttattgatgcttttaatcagtga
DBGET
integrated database retrieval system
