Pteronotus mesoamericanus (Parnell's mustached bat): 129074119
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Entry
129074119 CDS
T09558
Symbol
SCAF4
Name
(RefSeq) SR-related and CTD-associated factor 4
KO
K13167
SR-related and CTD-associated factor 4
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppam03021
]
129074119 (SCAF4)
03041 Spliceosome [BR:
ppam03041
]
129074119 (SCAF4)
Transcription machinery [BR:
ppam03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
129074119 (SCAF4)
Spliceosome [BR:
ppam03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
129074119 (SCAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
129074119
NCBI-ProteinID:
XP_054433766
LinkDB
All DBs
Position
Unknown
AA seq
1123 aa
AA seq
DB search
MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV
PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITSTFQYLYLCPSEDKSKIVRVLNLWQKN
GVFKIEIIQPLLDMAAGSSNAAPGPDSVTNNEGSPPPPVKVSSEPPLATTNSVPAVPQLP
SSDAFAAVAQLFQSTQGQQLQQILQTFQQPPKPQSPALDNAVMAQVQALTAQLKTAPTPP
EQKATAFDKKLLDRFDYDDEPEAVEESKKEDAAATAASTASAAPAPATAAAPPAAAIPAA
SPPQAPFGFPGDGMQQPAYTQHPNMDPFQPPMVALQQDPVHRQVPLPPNGQMPGFGLLPT
PAFPPMAQPGVPPAVPGQQPFQTPFQAPSEPLAQKAHQEMKIEQPCTQEVNKRHMSDNRK
SRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQERRDREKERERRQK
GLPPIKSETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHR
QDAYRALQKLSRGNYKVNQKSIKIAWALNKGIKADYKQYWDVELGVTYVPWDRVKPEELE
SFCEGGMLDSDTLNPEWKGIPKKHENEVAQNGGAESAHTEPVSPTPNPLPVPVPPMPVPA
PITVPPPQVPPQQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMH
LPPGFLPPGPPPPITPPVSIPPPHTPPMSIPNSAIAGINEDTTKDLSIGNPIPTVVSGAR
GNAESGDSVKMYGSAVPPAAPTSLPAPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGAR
PGMIPLQRPPGMPPPHLQRFPLMPPRPVPPHMMHRGPPPGPGGFGMPPPHGMKGAFPPHG
PFVRPGGMPGLGGPGPGPGGPEDRDGRQQQQPQPQQPPPQPQPQQPPPTQQPPPTQQAQP
QPFRNENRQQFNSGRDQERFGRRSFGNRVENDRDRYGNRNDERENSSRERREWGRRSPDR
DRHRDLEDRSRRSGGHRDRERDSRDRESRREKEDNRGKEKPEVTDRAADPPLSQVGTADT
VSELAKGEAAAIAAAAKPAAELPAEATSSAGPEKESGSAVEAR
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgtcaacgccttcaaccaggagctcttttcacttatggatatgaaacctccc
atctctcgagccaagatgattctcatcacaaaagctgctattaaagccattaagctttat
aagcatgtagttcaaatagtagaaaagttcatcaaaaagtgtaaaccagaatacaaggtt
ccgggattgtatgtgatcgactcaattgtacggcagtctcgtcaccagtttggaactgat
aaagatgtttttgggccaagattctctaaaaacataacctccacattccaatatttatat
ctttgtccatctgaagataagagtaaaatagttcgtgtgctgaacctttggcaaaaaaat
ggagtatttaaaattgaaattatccagcctcttttggacatggcagcagggagcagcaat
gccgccccagggcccgacagtgtcactaacaatgaagggtcacctccacctccagttaaa
gtctcttctgaacctcctctggccactacaaactcggtaccagctgtcccgcagctgccc
agctccgacgcctttgctgctgtggcccagctgttccagagcactcagggtcaacagctt
cagcagatccttcagactttccagcagcctccaaaaccacagtctcccgcccttgacaat
gctgtgatggctcaagttcaggctctcacggcccagttgaagacagctcccacgccaccc
gagcagaaggctactgcgtttgacaagaaactacttgatcgattcgattatgatgatgag
ccagaggctgtggaagaatcaaagaaagaagacgctgctgccactgctgccagcacagcc
tctgctgcccccgcccccgccaccgccgcagccccgcctgccgccgccatccccgcggcc
tcgccgccacaggcgcccttcgggtttcccggtgatggcatgcagcagccggcgtacacc
cagcatccgaacatggacccatttcagcctccgatggtggcgctgcagcaggacccggtg
caccgtcaggttccacttcctcctaatggacagatgccaggattcggtcttcttcccaca
cctgcgtttccgcctatggctcagcctggggtccctcccgctgtccccgggcagcagccg
ttccagaccccgttccaggcccccagtgagccactggcgcagaaggcacatcaggaaatg
aaaatagagcagccttgtactcaagaggttaataagcggcacatgtcggacaacagaaag
tcaagatctaggtcagcatccaggtcaccaaaaaggaggcggtctcggtctggttctcga
tctcggaggtctcgtcatcgacgttccagatcccggtccagagacaggcgccggcactct
ccgcggtctcggtcccaagaaagacgggaccgggaaaaggaaagagaacgccgacagaaa
ggccttcccccgatcaaatcagaaactgcaagtgtttgtagcaccacactctgggtggga
cagctggacaaaaggaccactcaacaggacgttgccagtctcttagaagagtttggtcca
attgaatcaattaacatgattcctcccagaggttgtgcctatattgttatggttcatagg
caagatgcttaccgcgccctgcagaaactgagccgtgggaactacaaagtgaaccagaaa
tccataaagatcgcctgggccttaaacaaaggaataaaggcagattataagcagtattgg
gatgtagagcttggcgtcacttacgttccgtgggacagagtcaagcctgaagaactggag
agcttttgtgaaggaggcatgttggacagcgacacacttaacccagagtggaagggaatt
cccaagaagcatgaaaatgaagtcgctcagaacggaggagcagaaagcgcgcacacagaa
ccagtgtcgcccacgcccaaccctttgcctgtgcccgtccctcctatgcctgtgcccgca
cccataacagtgcctcctccgcaggtcccgccacagcagcccggcccccctgtggtgggc
gccctgcagccgcccgccttcacgccgcccctggggatcccccctccgggcttcggcccc
ggcgtcccgccgccgccgccgccgcctccgttcctgcgcccggggttcaacccgatgcac
ttgccgccaggttttcttcctcccggacccccacctcctataactccgccggtgtccatc
cctcctcctcacactccgccaatgagcatcccaaactctgcgatcgctggtataaatgaa
gacactacaaaagacttatctattggaaatcccattccaacagtggtgtctggggcaaga
ggaaatgccgagtctggggacagtgtgaaaatgtacggctctgctgtgccgcccgccgca
cccacgagcctgcccgcccctcctgtaacccagcctgtttcgcttctggggactcaagga
gtggcccctggccctgtcatcgggttgcaggcaccatctactgggctcctcggggcccgg
cccggcatgatcccgctgcagcgccctccgggcatgcccccgcctcacctgcagcgcttc
cctctgatgccgccccggcccgtgccgccgcacatgatgcaccggggcccgccgcccggc
ccggggggcttcgggatgcccccgccccacggaatgaagggcgccttcccgccgcatggc
ccctttgttaggcctggtggaatgccagggctggggggcccaggaccaggcccggggggc
cctgaagacagggacgggaggcagcagcagcagccacagccgcagcagccgccgccgcag
ccgcagccgcagcagccgcctccgacgcagcagccgccgccgacgcagcaggcgcagcca
cagccgtttagaaatgaaaacaggcagcagttcaattcaggtagagaccaagaaaggttc
ggacgaagatctttcggaaatagggtggagaatgaccgggaccggtatgggaaccggaat
gacgagagagagaatagtagccgcgaaaggcgagagtggggaaggaggagccctgaccgg
gacagacacagagacttggaagacagaagcagacggtccggcgggcaccgagacagagag
agagattctagggatagagagtctcgcagagagaaggaagacaaccgaggcaaggaaaag
cctgaggtgacagacagggccgccgaccctccccttagccaagtgggcaccgcagacaca
gtctcagaactcgccaagggggaggccgcggccatagccgcggccgcaaaacctgctgca
gagctgcccgccgaggctacctcatccgccggccccgagaaggagtcgggctcggcagtg
gaggctcgctag
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