Pteronotus mesoamericanus (Parnell's mustached bat): 129075768
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Entry
129075768 CDS
T09558
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Pathway
ppam03082
ATP-dependent chromatin remodeling
ppam04714
Thermogenesis
ppam05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129075768 (SMARCC2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
129075768 (SMARCC2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
129075768 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppam03021
]
129075768 (SMARCC2)
03036 Chromosome and associated proteins [BR:
ppam03036
]
129075768 (SMARCC2)
Transcription machinery [BR:
ppam03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
129075768 (SMARCC2)
Chromosome and associated proteins [BR:
ppam03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
129075768 (SMARCC2)
PBAF complex
129075768 (SMARCC2)
GBAF(ncBAF) complex
129075768 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
CD99L2
Motif
Other DBs
NCBI-GeneID:
129075768
NCBI-ProteinID:
XP_054435854
LinkDB
All DBs
Position
Unknown
AA seq
1244 aa
AA seq
DB search
MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
WILDTDTFNEWMNEEDYEVNDDKTPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQAKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEKP
ADMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE
RIEESGTDEARAEGQATEEKKEPKEPREGVGAVEEEAKEKTSEAPKKDEEKGKEGDSEKE
SEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA
AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA
DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPTVHGLAMA
PASVAPAPPGGGAPPGSLGPSEQIGQAGSTAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS
PFPNQQTPPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPAPSIIPFGSLADSISINL
PPPPNLHGHHHHLPFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQS
PAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPPQ
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggccccaacgtgaagtactacgaggccgcggacaca
gtgacccagttcgacaacgtgcggctctggctcggcaagaactacaagaagtatatacaa
gctgaaccgcccaccaacaagtccctgtctagcctggtggtacagttactacaatttcag
gaagaagtttttggcaaacatgtcagcaatgcaccgctcactaaactgccgatcaaatgt
ttcctagatttcaaagcaggaggttccctgtgccacatacttgcagctgcctacaaattc
aagagtgatcagggatggcggcgttacgactttcagaatccatcacgcatggaccgcaac
gtggaaatgttcatgaccattgagaagtccttggttcagaataattgcctgtctcgaccg
aacatttttctgtgcccagaaattgaacccaaactactaggaaaactaaaggacattatt
aagagacaccagggaacagtcactgaggataagaacaacgcttcccatgttgtgtatcct
gtcccagggaacctggaagaagaggaatgggtacgaccagtcatgaagagggataagcag
gttcttctgcactggggctattatcctgacagttacgacacatggatcccagccagtgaa
attgaagcttctgtggaagatgctccaactccagagaaacctaggaaggttcacgcaaag
tggatcctggacacagacaccttcaatgaatggatgaatgaggaagactacgaagtcaat
gatgacaaaacccctgtctctcgccgaaagaagatttcagccaagacattgacagatgag
gtgaacagcccagattcagatcgacgggacaaaaagggggggaactataagaagaggaag
cgttccccctctccttcaccaacccccgaagctaagaagaaaaatgctaaaaaaggtccc
tcaacaccttacaccaagtccaaacgtggccacagagaagaagagcaagaagacctaaca
aaggacatggatgagccctcaccagtccccaacgtagaagaggtgacattgcccaaaaca
gtcaacactaagaaggactcggagtcagccccagttaaaggaggcaccatgactgacttg
gatgaacaggaggatgaaagcatggagaccacgggcaaggatgaagatgagaatagtacg
gggaacaagggggagcaggccaagaacccggacctgcatgaggacaatgtgactgagcag
acccaccacatcatcattcccagctatgcagcctggtttgattataacagtgttcatgcc
attgagcggagggctctccctgagttcttcaacggcaagaacaagtccaagactccagaa
atctacctggcctatcgaaacttcatgattgacacctaccgtctgaaccctcaggagtat
ctcacctccaccgcctgccgcaggaacctggcgggtgacgtctgtgccatcatgagggtc
catgccttcctagaacagtggggtcttattaactaccaggtggatgctgagagtcgacca
acccccatggggcctccacccacttctcacttccacgtcttggcggacacgccctcaggg
ctagtgcctctgcagcccaagaccccacagggccgccaggttgatgctgataccaaggct
gggcgcaagggcaaagagctggatgacctggtgccagagaccgctaagggcaagccagag
ctgcagacctctgcttcccaacaaatgctcaacttccctgacaaaggaaaagagaaacca
gcagacatgcagaactttgggctacgcacagacatgtacacaaagaagaacgttccctcc
aagagcaaagctgcggccagtgccactcgagagtggacagaacaggagactttgctactt
ctggaggcactggaaatgtacaaagacgactggaacaaagtgtcagagcatgtggggagc
cgcacgcaggacgagtgcatcttgcattttcttcgtcttcccatcgaagacccatacctg
gaagactcagaagcctctctgggccccctggcctaccagcccatccccttcagccaatca
ggcaaccctgttatgagcactgttgccttcctggcctccgttgtcgatcctcgagtcgct
tctgctgctgcaaagtcggctctagaggagttctccaaaatgaaggaagaggtacccaca
gccttggtggaagcccatgttcggaaagtggaggaagcagccaaagtgaccggcaaggca
gacccagccttcggtctggaaagtagtggtattgccggaaccacctctgatgagcctgaa
cggattgaggagagcgggaccgacgaggcacgggcggagggccaggccacagaggagaag
aaggagcccaaggaaccccgagaaggagttggggctgtagaggaagaagcaaaggagaag
actagtgaggcccccaaaaaggatgaagagaaaggaaaggaaggtgacagcgagaaggag
tcagagaagagcgatggggaccccatagttgaccctgagaaggagaaggaaccaaaggag
gggcaggaggaagtgctgaaggaagtggtggagtcggagggggaaaggaagaccaaggtg
gagagggacatcggtgagggcaatctctccactgctgccgccgctgcgctggctgctgct
gccgtgaaggccaagcacttggctgctgttgaggagaggaagatcaaatctctggtggcc
ctgctcgtagagactcagatgaaaaagttggagatcaaacttcggcactttgaggagctg
gagacgatcatggatcgagagcgagaagcactggagtatcagaggcagcagctcctggcc
gacaggcaagccttccacatggagcagctgaagtatgcggagatgagggctcggcagcag
cacttccagcaaatgcaccaacagcagcagcagccaccaccagccctgccccccggctcc
cagcctatcccacctacgggtgctgctgggccacccacggtccatggcctggctatggct
ccggcctctgtggcccctgctcctcctggcggtggggcccctcctggaagcttgggcccc
tctgaacagatcgggcaggcagggtcaactgcagggccacagcagcaacaaccagccgga
gccccccagcctggggcagtcccaccaggggtaccaccccctggaccccatggcccctca
ccgttccccaaccaacaaactcctccctcaatgatgccaggggcagtgccaggcagcggg
cacccaggcgtggcgggtaatgctcctttgggtttgccttttggcatgccgcctcctcct
cctcctgctccatccatcatcccatttggtagtctagccgactccatcagtattaacctt
ccccctcctcctaacctgcatgggcatcaccaccatctcccgttcgccccgggcactctc
cccccacctaacttgcctgtgtccatggcgaaccctctacatcctaacctgccggcgacc
accaccatgccatcttccttgcctctcgggccggggctcggatccgccgcagcccagagc
cctgccattgtggcagctgttcagggcaacctcctgcccagtgccagcccactgccagac
ccaggcacccccctgcctccagaccccacagccccgagcccaggcacggtcacccctgtg
ccacctccacagtga
DBGET
integrated database retrieval system
