KEGG   Pteronotus mesoamericanus (Parnell's mustached bat): 129076044
Entry
129076044         CDS       T09558                                 
Name
(RefSeq) LOW QUALITY PROTEIN: WD40 repeat-containing protein SMU1-like
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
ppam  Pteronotus mesoamericanus (Parnell's mustached bat)
Brite
KEGG Orthology (KO) [BR:ppam00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ppam03041]
    129076044
Spliceosome [BR:ppam03041]
 Complex B
  Other components
   Complex B specific factors
    129076044
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_CDC20-Fz WDR55 EIF3I WD40_MABP1-WDR62_2nd ANAPC4_WD40 LisH_TPL Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Ge1_WD40 Beta-prop_Vps41 Beta-prop_NWD2_C WDR90_beta-prop_4th Beta-prop_Nup120_160 Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_HPS5 Beta-prop_NUP159_NUP214 Beta-prop_WDR75_2nd WD40_RFWD3 Beta-prop_VPS8 Beta-prop_BBS7 Beta-prop_IFT140_1st Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_LRRK2 Beta-prop_IP5PC_F PROPPIN TFIIIC_delta VPS8_N LisH LisH_PAC1
Other DBs
NCBI-GeneID: 129076044
NCBI-ProteinID: XP_054436253
LinkDB
Position
Unknown
AA seq 515 aa
MSIEIESSDVIRLIMQYLKENSLHRALATLQEETTLSLNTVDSIEXFVADINSGHWDTVL
QAIESLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPEQYIHLENL
LARSYFDPREAYPDGSSKEKRRAAIAQALAVEVSVVPPSHLMALLGQALKWQQHQGLLPP
GMTIDLFRGKAAVKDVEEEKFPTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIKV
XNFTPGKIRKDLKYHAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQNGQCLR
RFERAHSKGVTCLSAFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGLSSFVNKATFTQ
DGHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGTDXTVNSVILLPKNPEHFMVCNRS
NTVVIMNMQGQIVRSFSSGTGKREGGDFVCCVLSPRGEWIYCVGEDFVLFRFSTVTGKLE
RTLTVHEKDVIGIAHHHQNLIATYSEDGLLKLWKP
NT seq 1548 nt   +upstreamnt  +downstreamnt
atgtcaatcgaaattgagtcctcggatgtgatccgtcttatcatgcagtacctgaaggag
aacagtttacaccgggcgttagccaccttgcaggaggagactactctgtctctgaatacc
gtggacagcattgagnntttcgttgctgacattaatagtggccactgggacactgttttg
caggctatagagtctctgaaattgccagacaaaaccctcattgacctctatgaacaggtt
gtactggaattgatagagctccgtgaattgggggctgcccggtcacttctgagacagact
gatcctatgatcatgttaaaacaaacacagccagagcagtatattcatctggagaacctc
ttggccaggtcttattttgatcctcgtgaggcatacccagatggaagtagcaaagaaaag
agaagagcagcaattgcccaggccttagctgtggaagtcagtgtggtgcctccatctcat
ctcatggcattgctgggacaggcattgaagtggcagcagcaccaggggttgcttcctcct
ggcatgaccatagatttgtttcgaggcaaagcagctgtcaaagatgtggaagaagaaaag
tttcccacacaactgagtaggcatattaagtttggtcagaaatcacatgtggagtgtgct
cgattttctccagatggtcagtatctggtcactgggtctgtcgatggattcattaaagta
tgaaactttacacctggaaaaatcaggaaggatcttaagtaccatgcccaggataacttc
atgatgatggatgatgctgtcctttgcatgtgtttcagcagagatacagaaatgttagca
actggggcccaagatggaaaaatcaaggtatggaaaattcagaatggacagtgtttaagg
agatttgaaagggcacatagtaaaggtgtcacctgtctaagtgccttttctaaggatagc
agtcagatccttagcgcctcttttgaccagacaattagaattcacggtttaaaatctggg
aaaaccctgaaggaatttcgtggtctttcttcttttgttaacaaagcaacatttacacaa
gatggacattatattattagtgcatcctctgatggcactgtaaagatctggaatatgaag
accacagaatgttcaaatacctttaaatctctgggcagcactgcagggacagacnncact
gtcaacagtgttatcctgcttcctaaaaacccagagcacttcatggtgtgcaacagatca
aacacagtggtcatcatgaacatgcaggggcagattgtcagaagcttcagctctggtact
ggtaagagggaaggtggtgacttcgtttgctgcgtcctctctccccgtggtgaatggatc
tactgtgttggggaggactttgtgctcttccgttttagcacagtcactggcaaactggag
agaactttgacagttcatgagaaggatgtgattggtattgcacatcatcatcagaatctg
attgctacctacagtgaagatggactccttaaactctggaaaccctaa

DBGET integrated database retrieval system