Pteronotus mesoamericanus (Parnell's mustached bat): 129076795
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Entry
129076795 CDS
T09558
Symbol
PALB2
Name
(RefSeq) partner and localizer of BRCA2 isoform X1
KO
K10897
partner and localizer of BRCA2
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Pathway
ppam03440
Homologous recombination
ppam03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
129076795 (PALB2)
03460 Fanconi anemia pathway
129076795 (PALB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppam03400
]
129076795 (PALB2)
DNA repair and recombination proteins [BR:
ppam03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
129076795 (PALB2)
FA (Fanconi anemia) pathway
Downstream FA components
129076795 (PALB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PALB2_WD40
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
129076795
NCBI-ProteinID:
XP_054436923
LinkDB
All DBs
Position
Unknown
AA seq
1184 aa
AA seq
DB search
MEEAPGKPLSCEDKEKLKEKLAYLKREYSKTLARLQRAQRAEKVKNFIKKTVKEQACLLQ
PEVSPQLNHSEPKTPVSSCDALQINTCLDEETGAVEPQTLNPGHGPVEGLDMQRKDDIQE
YFAYRVSGPDDKKKQSKLPGRKKKQQKRIFISQEKDSFFDTNSLILSEKRLNKQKEINSE
NPGTPVTKTRTKFSSPQSDIPDSRAPVTETNGGSVLIPLNTKPQSSVDAVLGENSFPGVP
PPPFYTPSDNSSGPHLQYKLPKRNCEIIAHGLKSISLTAPINLEAHDKNTTVFRGSPEVK
KAVSASGQQPGSLELETDNACSVNELTYNLPANENQNLKEQNHTEESLESSSNALDKQNH
TGESLESSSSALDNRSESLQENEVLSQSKSLGPKVVASVSAENQTHSCTVLEDLLFPAEY
YVRTTRRMSNCQRKVAPEAVIQTHFDVRKKRVKNKEAAKILNLSNEETNQNMIKVYGTCT
GQTSSRSPFQRLLSLTEVSSPTGPTKDDFSRKVVTQQSSRRRRGKRRSICNPTSYHQLLT
SGISGVNRSKEEVTLHKDQNEKAIIHGKEGHCQKEDYFSSSNNAYLALGSDAFSAPSHKN
EMLSLKQLSSFLKITDFQLPDEEFGPLKLEKLKSYSEKPIEPFGSKVYGDRHLKEGKCIV
LEELTPKQTNIEMEDLGEELIVLPGKAHPKIPNLKSQAQQKGLSSSILLFTPLNTITPED
NDKVTSDVCSPAFPIIGTTPALGPQACKVSVEVTGLSCSSPQLSHGKTSESHQCDSCTSP
PKFDGILHVSGRKGQLDYDCDSDPQATPLPTESFTFKEDQLCGNTSLESWKHSIEQTEIT
DVPACDSLNPGNLQLVSKLKNPSGSCPVDVSAMWWEIAGIKEPCIVTACEYAVSLWKPLD
IWQWEKMYSWHFTEFPVLQIVPVPDVCNLVCVALGNLEIREIRALLCFSDGRSEKQVLLT
SGNIQAVLGLTKRRLVSSIRTLCDQQIEIVTIAEDGGSKEKQFLMPLEETVQTFAEVQGM
QEALLGTTIMNNIVIWNLKTGQLLKKMHIGDSYQASICHKAYSEMGLLFVLLSHPCAKKE
EPSGSPVFQLIVINPKTALSMGVMLYCLPQGQAGRFLEGDVKDNFAAAVLTSGTIAIWDL
FLGHCTALLPPVSNQTWSFVKWSGTDSHLLAGQKDGNIFVYLIS
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggctcccgggaaacccctcagttgtgaggacaaggaaaagttgaaggaaaaa
ttagcatacttaaaaagggaatacagcaagactctggcccgccttcagcgtgcccaaaga
gctgagaaggttaagaattttattaagaaaacagtgaaagaacaagcttgtttactccaa
ccagaagtttcaccacagctaaaccattcagaacctaaaactcctgtatcttcttgtgat
gcattacaaatcaacacctgtcttgatgaagaaactggagctgttgagcctcagaccctt
aaccctggacatggcccagtggaaggattagacatgcagagaaaagatgatatccaggaa
tattttgcctacagggtcagtggccctgatgataagaaaaagcagagtaagctgccaggg
agaaaaaagaagcagcagaagagaatatttatttcacaagagaaagactctttctttgac
accaattcacttatcctctctgaaaaaagactaaacaaacaaaaagaaatcaatagtgaa
aatcctgggacacctgtaactaaaacaagaaccaagttttcaagtcctcagtctgacatt
ccagattctcgagcaccagttacagaaactaatggagggagtgtattaattccattaaat
accaagccacaaagcagtgtggatgctgtcttaggagaaaacagttttcctggggtgccc
cctcctcctttttatactccatcagataacagcagtggtccgcaccttcaatataagctt
cctaaaaggaactgtgaaattattgctcacggtttaaaaagcattagccttaccgcacct
ataaacttagaggcacacgacaaaaacacgactgtctttagaggaagcccagaggtaaaa
aaagctgtaagtgcaagtggccagcagcctggaagtctcgagttagagacagataatgca
tgttctgtaaatgaactcacttacaacttaccagcaaatgaaaaccaaaatttaaaagaa
cagaatcacacagaggagtctttagaatcttccagtaatgcccttgataaacaaaatcac
acaggggagtctttagaatcttccagtagtgcccttgataatagaagtgaaagtcttcag
gaaaatgaggttctgagtcagtctaagagtcttggcccaaaagtagtcgcttctgtttct
gcagaaaatcaaacacattcttgcactgtgctagaagaccttctttttcctgctgaatat
tatgttagaacaacacgacgtatgtcaaattgccagaggaaagtagccccagaggctgta
attcaaactcacttcgatgtcagaaagaaaagagttaaaaataaggaagctgctaaaatt
ttaaacctttccaatgaagaaactaaccaaaatatgattaaggtgtatggcacatgcaca
ggacaaacaagttcaagaagtccttttcagagacttctctcattaactgaagtcagctct
cccactgggcccactaaagatgacttttctaggaaggtggtgacccagcaatccagtaga
agacgcagaggaaaaagaaggtcaatctgcaaccctacatcatatcatcaactactcact
tctggcatatcaggtgttaacaggtccaaggaagaagtcaccttgcacaaagatcagaat
gaaaaagcaattattcatgggaaagaaggtcactgccaaaaagaggactacttttcttcc
agtaataatgcttatttagctttgggcagtgatgctttcagtgccccatctcataagaat
gaaatgttaagtttaaagcaactgtcatcttttctcaaaatcacagactttcagttacct
gatgaagaatttggacctcttaagcttgaaaaactgaagtcctactcagaaaagccaatt
gagccttttggatcaaaagtatatggagataggcatcttaaagagggaaaatgtattgtt
ttggaagaactgactcctaaacaaaccaacatagaaatggaggacttgggagaggaactg
attgttctaccaggaaaagcacatcctaaaataccaaatctaaaaagccaggctcagcag
aagggcctttcctcatcgatattacttttcactcctttaaatactattactcctgaggat
aatgacaaagtgacatcagatgtgtgttcacctgccttccccatcatcggcactactcca
gcccttggtccccaagcatgcaaagtgtccgtagaagttaccggactaagttgctcttca
ccccagctttctcatgggaaaaccagtgagagtcatcaatgtgacagttgcaccagccca
ccaaaatttgatggcatcctccatgtgtcaggaaggaagggacagcttgactatgactgt
gattctgatccccaagcaacacctctccccactgagtcattcactttcaaagaagatcag
ctctgtggaaatacatccctagaatcatggaaacattccattgaacagactgaaataaca
gatgttcctgcttgtgacagcttaaacccaggcaacctacaattggtttcaaaacttaag
aatccctcaggttcctgtcccgtggatgtgagtgccatgtggtgggagatagctggtatc
aaagagccatgtatcgtaactgcttgtgaatatgcagtttctctttggaaacctctggat
atttggcagtgggaaaaaatgtattcctggcacttcacagagtttccagtattacagata
gttcctgtgcctgatgtttgtaatctggtgtgtgtggctttgggaaatttggaaatcaga
gaaatcagagcattactttgtttctctgatggtagaagtgaaaagcaagtgctcctgact
tctggaaatatacaagctgtgcttggcctgacaaagaggaggctagtcagtagcattagg
accctttgtgatcaacaaatagagattgtgacaattgctgaagatggagggagcaaagaa
aaacagtttttgatgcccctcgaggagactgtacaaacttttgctgaagttcaagggatg
caggaagctctgcttggtaccactataatgaacaacattgttatttggaatttaaaaact
ggtcagctcctgaaaaagatgcacattggtgattcctaccaagcttccatctgtcacaaa
gcttattctgaaatggggctcctttttgttcttttgagtcatccgtgtgccaaaaaggag
gagccatcgggaagccctgtgttccagcttattgtgatcaaccccaagacggccctgagc
atgggtgtgatgctctactgtctccctcaaggacaggctgggaggttcctggaaggtgac
gtgaaggataattttgcagcagcagtattgacttctggaacgattgccatttgggactta
tttctaggtcattgcacagctcttcttccacctgtctctaaccagacctggtcttttgtt
aaatggtcaggtacagattctcatttgctggctggacaaaaagatggaaacatatttgtg
tatctaataagttag
DBGET
integrated database retrieval system
