Pteronotus mesoamericanus (Parnell's mustached bat): 129077149
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Entry
129077149 CDS
T09558
Symbol
PDCD11
Name
(RefSeq) protein RRP5 homolog
KO
K14792
rRNA biogenesis protein RRP5
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppam03009
]
129077149 (PDCD11)
Ribosome biogenesis [BR:
ppam03009
]
Eukaryotic type
90S particles
Other 90S particles
129077149 (PDCD11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1_RRP5
S1
Spt6_S1
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
OB_RRP5
OB_RRP5_4th
Suf
TPR_14
HAT_Syf1_CNRKL1_C
TPR_19
ARM_TT21
UTP6_C
TPR_CcmH_CycH
ARM_TT21_5th
TPR_16
TPR_15
TPR_12
DUF7017
DUF2110
NRDE-2
Motif
Other DBs
NCBI-GeneID:
129077149
NCBI-ProteinID:
XP_054437418
LinkDB
All DBs
Position
Unknown
AA seq
1875 aa
AA seq
DB search
MATMEENFPRGGTRKTHKSEKAFQHSVEQDNLFDISTEEESTKRKKSQTGPAKAKKLKIE
KRESSKSAKEKFEILNIESLCEGMRILGCVKEVNDLELVISLPNGLQGFVQITEICDAYT
KKLSEQVAQEEPLKDLASLPELFSLGMLVRCVVSSLGITEKGNKSVKLSLNPQNVNKVLS
AEALKPGMLLTGTVSSLEDHGYLVDIGVVGARAFLPLQKAQDYVRQKNKGAELKVGQYLN
CVIEEVKGNGGVVSLSVGHSEVSTAVATEEQNWSLNNLLPGLVVKAQVQKVTPLGLTLNF
LSFFTGVVDFMHLEPKKVGTYSSNQAVRACVLSVHPRTRAVRLSLRPAFLQPGRPLTRLS
CQHMGAVLDDVPVQGFFSKAGATFRLKDGSLAYARLSHLSDSKNAFNPDAFKPGNTHKCR
IINYSQMDELALLSLRTSIIEAQYFRYHDIKPGALVKGTVLTIKPYGMLVKVGEQIRGLV
PPVHLADIMMKNPEKKYHIGDEVTCRVLLCDPEAKKLMMTLKKTLIESKLPAITCYADAT
PGLQTHGFILRVKDYGCIVKFYNDVQGLVPKHELSAEYVPDPERVFYTGQVVKVAVLNCE
PSKERMLLSFKLLSDPKKEQAGHSQKKRKAVNIGQLVDVKVLEKTKDGLEVAVLPHNIPA
FLPTSHLSDHVANGPLLYHWLQAGDTLHRVLCLSRSEGHVLLCRKPALVSTVEGGQDPKS
FSEIQPGMLLIGFVKSIKDYGVFVQFPSGLSGLAPKAIMSDKFVTSTSDHFVEGQTVVAK
VTNVDEEKQRMLLSLRLSDCSLGDRATTSLLLLSQCLEERQGVRSLMSNRDSVLIQTLAE
MTPGMVLDLEVQEVLEDGSVVFSEGPVPGLVLRASKYHRAGQEVESGQKKKAVILHVDML
SLEVHVSLCHNLVNRKAKKLKKGSEHQAVVQYLEESFAIASLVETGHLVAFSLTSHLNDT
FRFDSEKLQVGQGVSLTLRTTEPGVTGLLLAVEGPAAKRTMRQTRKDSETVDEDDEGDPA
VVVGTTKKHTLSIGDMVTGTVKSIKPTHVVVTLENGIIGCIHASHILDDVPVGSSPTAKL
KVGKTVTARVIGGRDVKTFKFLPISHPRFIRTIPELSVRPSELAKDGHTALNTHSVNPSE
KIKQYQAGQTVTCFLKKYNVVKKWLEVEIAPDIRGRIPLLLTSLSFKVLKHPDKKFRIGQ
ALKATVVGPDSSKAFLCLSLIGPHKLEEGEVAMGRVVKVTPKKGLTVSFPFGRIGRVSIF
HVSDCYSETPLEDFTPQKIVRCYVLSTADEVLTLSLRSSRTNPETKSKITDPEINSIQDI
QEGQLLRGYVKSVQPHGVLCGLGPSVVGLAQYPHVSQHSLSKEALCNRYLPEGKLLTAKV
LSVNHQKNLVELSFLPRDTGKPDVFPASLGQPLVKKGERQGETEERNHKKEGEKEKKKNQ
ERKEKREQKGQEKTQMLNKEKKEPQKPQAKKQGKRPHPESGSEQETVTKKQKKAAPAEED
DSGVEVYYREGDEEMEERSVPPKGKQTKPAELPRLQLSSGFVWDVGLDSLTPALPPRGES
SDSEEDEQPQQATKKKSKKERELEKQNAEKELSRIEEALMDPGRQPESADDFDRLVLSSP
NSSILWLQYMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQES
LTKVFERAVQYNEPLKVFLQLADIYTKSEKFQEAGELYNRMLKRFRQEKAVWIKYGAFLL
RRGQAEASHRVMQRALECLPKKEHVDVISKFAQLEFQLGDAERAKAIFENTLSTYPKRTD
VWSVYIDMTIKHGSQKEVRDIFERVIHLSLAPKRMKFFFKRYLDYEKHHGTEKDVQAVKA
KALDYVEAKGSMTED
NT seq
5628 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccatggaagaaaacttcccccgtggggggacaagaaagacccacaaatcagag
aaagcttttcagcattcagttgaacaagacaatttatttgatatttctactgaagaggaa
tccaccaaaaggaaaaagagccagacaggaccagcaaaagcaaaaaagttgaaaatcgaa
aagagagaaagcagcaagtctgcaaaagagaagtttgaaattcttaatatcgagtcactg
tgtgaagggatgcggattttgggttgtgtgaaagaggtaaatgacctggaactggtgatt
agtctccccaatggcctccagggttttgtgcaaataactgaaatctgtgatgcttacacc
aaaaagctgagtgagcaggtggctcaagaagaacctctgaaggacctggccagcttgccg
gaactcttttctcttgggatgctggtgaggtgtgtggtgagcagtctgggcatcacagag
aaaggcaacaagagtgtcaagttatctctgaacccccaaaacgtgaacaaagtgctgagt
gcggaggccctgaagcctggcatgctgctcacaggcactgtgtccagtctggaagaccat
ggctacctagtggacattggtgttgttggggccagagcttttctgccactgcagaaagcc
caggattatgtcagacagaagaacaaaggtgcggaactgaaggtgggccagtacctgaac
tgcgtcattgaagaggtgaaaggcaacggaggagttgttagtctgtctgttggtcattca
gaagtttccactgccgttgctactgaggagcaaaactggagccttaataacttgctacct
ggactggtggtcaaagcccaggtacagaaggtgactccgcttggccttacgctaaacttc
ctctcattcttcacgggcgtggttgattttatgcacttggaacccaagaaagttggaacg
tattcctcaaatcaagcagtaagggcctgcgtcctctctgtccatcctcggaccagggct
gtgcggctcagcctgcgccccgccttcctgcagcctgggcgcccactcacccggctgtct
tgtcagcacatgggagctgtcctggatgacgttcctgtccagggctttttcagcaaggct
ggggccacgttcaggctgaaggatgggtctctggcctatgctcggctcagccatctctct
gattctaagaatgccttcaatcctgatgccttcaagccaggaaacactcacaagtgtaga
atcatcaactacagccaaatggatgaactggctttgctctctttgaggacgtctattatt
gaagctcagtactttagatatcatgacatcaaacctggggcattggtaaagggcacagtg
ctgaccataaagccatacgggatgttggtgaaggtgggtgagcaaatcaggggcctggta
cctcctgtgcacctggctgacatcatgatgaagaatccagagaagaagtaccacattggg
gatgaagtcacatgccgggttttgctttgtgaccctgaagccaaaaagctgatgatgacc
ctgaagaaaaccctgattgagtccaaacttcctgccattacctgttatgccgatgccaca
cctggtctgcagacacatggcttcatcctcagggtcaaggactatggctgcattgtgaag
ttctacaatgatgtgcagggactggtacctaagcatgagctcagtgctgagtatgtccct
gaccctgagagggtcttttacactggccaggtggtgaaggttgcggtgctgaactgtgag
ccatccaaagagaggatgctcttgtccttcaagctgttgagtgatccaaagaaagagcaa
gcgggacacagtcagaagaaaagaaaagccgttaacattgggcagctggtggatgtgaag
gttttagagaagaccaaagatgggctggaggtggctgtgctgccccacaacatccctgcc
tttctccccacatctcatctgtcggaccacgtcgccaatggcccactgttgtatcactgg
ctccaggccggtgacacccttcacagagtgctgtgtctgagccggagtgaggggcacgtt
ctcctttgtaggaagccggctttggtctccacagtggagggtggccaggatcccaagagc
ttctcagaaatccagcctggaatgctgcttattggttttgtgaagagcatcaaggactac
ggcgtgttcgtccagttcccttcgggtcttagcggactggcccccaaagctatcatgagt
gacaaatttgtgacctccacaagtgaccactttgtcgaggggcagacagtggttgcgaag
gtgaccaacgtggatgaggagaagcagcggatgctgctgtctctgcggctgtcggactgc
agtctgggggaccgggctaccaccagcctcctcctcctgagccagtgcctggaggagcgg
cagggtgtgcgcagtctcatgagcaaccgagactctgtgttgatccagacgctggctgag
atgaccccaggcatggtccttgacctagaggtgcaggaggtgttggaagatggctctgtg
gtgttcagtgagggcccagtgcctggcctggttctgagagccagcaaataccatcgggca
gggcaggaggtggaatctgggcagaaaaagaaggctgtgatcctacatgttgacatgttg
agtttggaagtgcatgtttccctttgccacaatttggtgaatagaaaagctaaaaagctg
aagaaaggcagtgaacaccaggcggttgtgcagtacttggaggagtcctttgccattgct
tccttggtagagactggtcacctggtagctttctccctgacctcgcatctcaatgacacc
ttccgctttgactcggagaagttgcaggtgggacagggtgtctccctaaccctcaggacc
acggaaccgggagtgactggtcttcttctggccgttgaggggccagctgctaagaggact
atgagacagacccggaaggattcagagacagtcgacgaggatgatgaaggggatccggcg
gtggtcgtagggactacaaagaagcataccctctccattggggacatggtcacagggact
gtcaagtccattaagcccacccatgtggtcgtgaccctggaaaatggcatcattggctgt
atccatgcctcccacattctagatgatgttccagtgggctcatctcctactgccaagctg
aaagttgggaagacggtcaccgcccgtgtgattggcgggcgagacgtgaagacattcaag
tttctcccaatcagccatcccagatttattcgaaccatcccggagctgagtgtccggcca
agtgagctggcgaaggatggccacactgctctcaacacgcactctgtcaacccttcggag
aagattaaacagtaccaggctggtcagacggtgacttgtttcttgaagaagtacaatgtg
gttaagaaatggctcgaggtggagattgctccagacatccggggaagaatccccttgttg
ctcacttctcttagcttcaaggttctgaaacacccagataagaagtttcggataggccag
gccctgaaggccaccgtggtgggcccagattcctccaaggccttcctgtgtctctcactc
ataggtccacacaagcttgaagagggggaagtagccatgggccgagtggtgaaggtgact
cccaagaaagggctgactgtctccttcccctttgggaggattggcagagtcagtatattt
cacgtgagtgactgctactcagagacgcccctggaagacttcacaccccagaagattgtc
aggtgttatgtcctgtccactgcagatgaggtattgactttgtcgctgcgatcgtccaga
acaaacccggagacaaaaagcaaaataacagatcccgagattaactccatccaggacatt
caggaagggcagctcctgaggggctacgtgaagtctgtccagccgcacggtgtgctctgt
ggcctcggaccctcagttgtgggtttggcccagtacccacatgtctcccagcacagcctg
tccaaggaagccctttgtaacagatacctccccgaagggaagctgctcacagccaaggtc
ctaagtgtgaaccaccagaagaacctggtagagctgtcattcctcccccgtgataccggg
aagccggatgtgtttcctgcctccctgggacagccacttgtaaagaaaggggagaggcaa
ggagagacagaggagagaaaccacaaaaaagaaggagagaaggagaaaaagaagaaccag
gaaaggaaagagaagagggagcagaagggacaggagaagacacagatgcttaacaaagag
aagaaagagccccagaaaccgcaagcaaagaagcagggcaagcggcctcacccggagtcc
ggaagtgaacaggagacggtaaccaagaagcagaagaaagccgctccggcagaggaggac
gacagtggtgtcgaagtgtactatcgggaaggagacgaggagatggaagagaggagcgtg
ccgcccaagggaaagcagacgaaaccagcagaattgccccggctgcagctgtcttccggc
ttcgtttgggacgtggggctagactctcttaccccagccttgccgcctcgaggagagagc
tcagacagcgaggaggatgagcagccacagcaagccacgaagaagaaaagcaagaaggaa
agggagttggagaagcagaatgcagagaaagagctgtcccgcattgaggaggccctgatg
gatcctgggcgacagccagagtcagcagatgattttgatcgacttgtgctgagctccccc
aacagctccatcctgtggctgcagtacatggccttccacctgcaggccacggagattgag
aaggcccgggccgtggccgagagggctctcaagaccatctccttcagagaggagcaggag
aagctgaacgtgtgggtggccctgctgaacctagaaaacatgtatggctcgcaggagtca
ctgaccaaggtcttcgagcgggccgtgcaatacaatgaacctctcaaggtcttcctccag
ctggctgacatctacaccaagtcagagaaattccaggaagctggggaactctacaaccgg
atgctgaagcgtttccggcaggagaaagctgtctggatcaaatatggcgccttcctcctg
cggaggggccaggctgaggccagccaccgtgtgatgcagcgcgccctcgagtgcctgcct
aaaaaagagcatgtggatgtgatctccaagtttgcccagcttgagttccagctgggggat
gcggagcgggccaaagccattttcgagaacacactgagtacctacccaaagcgcacagat
gtctggtcggtctacatcgacatgaccatcaagcatggcagccagaaggaagtccgagac
atcttcgagcgggtcattcacctgagtctggcccccaagcgaatgaaattcttcttcaag
cgctacctggactacgagaagcaccatggcactgagaaggacgtgcaggcagtgaaggcg
aaggccctggactacgtagaggccaagggctcaatgacggaggactag
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integrated database retrieval system
