Pteronotus mesoamericanus (Parnell's mustached bat): 129077581
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Entry
129077581 CDS
T09558
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Pathway
ppam03030
DNA replication
ppam03410
Base excision repair
ppam03420
Nucleotide excision repair
ppam03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
129077581 (RFC1)
03410 Base excision repair
129077581 (RFC1)
03420 Nucleotide excision repair
129077581 (RFC1)
03430 Mismatch repair
129077581 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppam03032
]
129077581 (RFC1)
03400 DNA repair and recombination proteins [BR:
ppam03400
]
129077581 (RFC1)
DNA replication proteins [BR:
ppam03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
129077581 (RFC1)
DNA repair and recombination proteins [BR:
ppam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
129077581 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
BRCT_2
AAA_14
AAA_5
AAA_22
Rad17
RuvB_N
AAA_7
AAA_17
AAA_33
AAA_16
AAA_18
AAA_30
nSTAND3
Zeta_toxin
RNA_helicase
AAA_19
NTPase_1
NPHP3_N
TIP49
Nexin_C
AAA_28
Motif
Other DBs
NCBI-GeneID:
129077581
NCBI-ProteinID:
XP_054438025
LinkDB
All DBs
Position
Unknown
AA seq
1156 aa
AA seq
DB search
MDIRKFFGVIPSGKKSASETVKKNEKTKSAEETLKAKKGIKEIKVNSSCKDDDFKQKQSN
KKKRIIYDSDSEPEETVQEKNAKKQPEKLPLSPKPAKILRQHPVTYISETDEEDDFTCKK
AASKSKENGRSTNSYLGASTMKKNEENTKTKNKPLSPIKLSPTSVLDYFGTGSVRRSDKK
MVASKRKEPSQNTNDSRLNDEAIAKQLQLDEDAELERQLHEDEEFARTLAMLDEEPKKKK
VAFFLGSEYTAPKDPEEGETFSSVQANLSKAEKHKYPYKVKTEQFLNEKKNYSPKKQTKC
ESSKESQQHSKLSAHKIGETSPKASSKLALLKIKEESSSKETEPMATKRKESAIELKETK
SPKKTKSSPAKKESVSPEDSEKRRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLTF
VITGVLESIERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKRDKAAALGTKIIDE
DGLLDLIRTMPGKKSKYEIAVEAEMNKEKSKLQRTPSKNDQGKRKISPTKNESESKKCRL
TPKKDSSMKSIKKETSVFQRGLDSKEQVAEEANGDSQARRSADDSSENRVANLLWVDKYK
PASLKTIIGQQGDQSCANKLLRWLQNWHKSPSEDKKHAAKFGKYAGKDDGSSFKAALLSG
PPGVGKTTTASLVCQELGYSYVELNASDTRSKNSLKEIVAESLNNTSIKGFYSSGAAPSA
GTKHALIMDEVDGMAGSEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHHCFDLR
FQRPRVEQIKAAMLSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCAQSKALTYD
QAKADSHRAKKDIKLGPFDVARRVFAAGEETAHMSLVDKSDLFFHDYSIAPLFVQENYIH
VKPIAAGGDIKKHLMLLSRAADSICDGDLVDRQIRSQQNWSLLPTQAIYASVLPGELMRG
SLSQFPSFPSWLGKHSSTGKHDRLVQDLALHMSLRTYSSKRTVNMDYLSHIRDALVRPLT
SHGVEGIQDVVALMDAYYLMKEDFENIMEISSWGGKPSPFSKLDSKVKAAFTRAYNKEVH
LTPYSIQAVKTPRHSTGPALDTEYSEELNEDDSQSDEKDQDSMETDAMIKKKTRSSKPSK
SEKDESRKGKGRSSKK
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atggatattcggaaattctttggggttataccaagtggaaagaaatctgcaagtgagaca
gtaaagaagaatgagaaaacaaagtccgctgaagaaactttaaaagcaaagaaaggaata
aaggaaatcaaggtaaatagttcttgtaaagatgacgactttaaacagaagcaatcaaac
aagaaaaagaggatcatctatgattcagactcagaaccagaggagacagtgcaggaaaaa
aatgccaaaaagcaaccagaaaagttgccattgtctcctaaacctgctaaaattctacga
cagcaccctgttacatacatttcagaaacggatgaagaagatgactttacgtgtaagaaa
gcagcctctaaatcaaaagagaatggacgatctacaaatagttatcttggagcatccacc
atgaaaaagaatgaagaaaacactaagaccaagaataagcctttatcaccaataaaactt
agccccacatcagtgcttgattattttggaactggaagtgtccgaagatcagataagaag
atggtggcaagcaaaagaaaagagccttcacaaaatacaaatgattccagattaaatgat
gaagccattgccaagcaattgcaacttgatgaagatgcagagctggagagacaactgcat
gaagatgaggagtttgccagaacattagccatgttggatgaagaacctaagaagaaaaag
gtggcgtttttcctgggctctgaatacacagctccaaaggatccagaagagggagaaaca
ttttcatctgtccaggccaatttaagtaaagcagaaaaacataaatatccttataaagta
aaaacagagcaatttctgaatgaaaaaaagaactacagtcctaagaagcaaactaaatgt
gaaagttcaaaagaatctcagcagcattccaagttatcagctcacaaaataggagaaact
tctcctaaagctagttccaagctggcacttctgaaaataaaagaagagagttcttctaaa
gaaacagagcctatggccacaaaaagaaaagaaagtgccattgaattgaaagagacaaaa
agtcctaagaaaacgaaaagttctcctgccaaaaaagagtctgtaagtcctgaagattct
gaaaagagacgcactaattatcaagcttatcggagttacttaaatcgagaaggtcccaaa
gctctaggctccaaggaaataccaaagggagctgaaaattgcttggaaggccttacattt
gtaatcacaggagtgctggagtccattgaaagagatgaagccaagtctctaattgaacgt
tatggaggaaaagtaaccggaaatgtcagcaagaaaacaaactaccttgtcatgggtcgt
gatagtggacagtccaagagagataaggcagcagccttggggacaaaaattattgatgag
gatggcctattggatctgattcgaactatgccaggcaagaagtccaaatatgaaatagct
gttgaagctgagatgaataaagagaagtccaaattgcagagaacaccctcaaaaaatgac
caaggaaaaagaaaaattagtccaactaagaacgagtcagaatccaaaaagtgcagactg
actcccaaaaaggatagctccatgaagtcaataaaaaaagaaacaagtgtgtttcagaga
ggcctggactccaaggagcaggtggctgaggaggcaaatggtgacagccaggctaggaga
tcggctgatgacagcagtgaaaacagagtggcaaatttgctctgggtggataaatacaag
ccagcctcactcaagaccatcattggacagcaaggtgaccagagctgtgccaacaaactc
ctacgctggctccaaaactggcacaagagtccatctgaagacaagaaacacgcagcaaag
tttggtaaatatgctggcaaagatgatggctctagttttaaagcggcattgctctcaggc
cctccaggtgttggcaaaaccaccacggcctctctggtttgtcaggaactgggatatagc
tacgtggaactgaatgcaagtgatactcggagtaagaacagtttgaaggagattgttgct
gagtcactgaacaataccagcatcaaaggcttttattcaagcggagcagccccttcagca
ggcacgaaacatgccctcatcatggacgaagtggatggcatggcgggcagtgaggaccgg
ggaggaattcaggaattaattggtctgataaaacatacaaaaattcccattatttgtatg
tgcaatgatagaaatcaccccaagattcgctctttggttcatcattgttttgatcttcgt
tttcaaagacctcgggttgaacagattaaggctgctatgttgtctattgcatttaaagag
ggtttgaagattcctcctccagctatgaatgaaataattttgggagccaatcaagatatc
agacaggttttacacaatctgagtatgtggtgtgcacagagtaaggcattaacctatgac
caggccaaggctgattctcatagagccaaaaaggatattaaactgggcccatttgatgtt
gcccggagagtgtttgcagctggagaggagactgctcacatgtcacttgtggataaatca
gacctcttttttcatgattattcaatcgcacccctctttgtccaggagaactacattcac
gtgaagcctatagctgcggggggcgacataaaaaagcacttgatgcttttgagcagagcg
gcagatagtatatgtgatggcgacctggtggaccggcagatccggagtcagcaaaactgg
agccttctgcccacacaggccatttatgccagcgtccttcccggagagttgatgaggggg
tccctgagccagtttccctcctttcccagctggctgggtaagcactcgtccacaggcaaa
cacgaccgtcttgttcaggacctcgcgctgcacatgagtctcagaacttactccagcaaa
aggactgtgaatatggattatctgtcacatataagggatgcacttgtacggcccttgacc
tcacatggggtagaaggaatacaggatgttgttgcccttatggatgcatattatttgatg
aaagaagactttgagaatatcatggaaattagcagctggggaggcaagcctagtcctttc
tccaagctggattccaaggtgaaagcagcctttacaagagcttacaataaggaagtccac
cttactccatactcaattcaggcagtaaagacacccagacacagcacaggcccagcactg
gatactgaatacagtgaagagttaaatgaagatgactctcaatctgatgagaaagatcaa
gactctatggaaacggatgctatgatcaagaaaaagacaagatcttcaaagccttcaaaa
tcagaaaaagatgagtccagaaaaggaaaaggaagaagttcaaagaaatga
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integrated database retrieval system
