Pteronotus mesoamericanus (Parnell's mustached bat): 129078246
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Entry
129078246 CDS
T09558
Symbol
VPS13A
Name
(RefSeq) intermembrane lipid transfer protein VPS13A isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppam04131
]
129078246 (VPS13A)
Membrane trafficking [BR:
ppam04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
129078246 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
ATG2_CAD
RRM_fung
Motif
Other DBs
NCBI-GeneID:
129078246
NCBI-ProteinID:
XP_054438978
LinkDB
All DBs
Position
Unknown
AA seq
3170 aa
AA seq
DB search
MVFESVVVDVLNRFLGDYVVNLDTSQLTLGIWGGAVALKNLEIKENALSQLDVPFKIKVG
HIGNLNLKIPWKNLYTQPVVAVLENIYLLIVPSSIIKYDPLKEEKQLLETKQQELKRIEE
AKQKVADQEKQLVERQDTFTEKLITQIIKNLQVKISNIHIRYEDDITNRENPLSFGISLQ
NLSMQTTDQNWVPCLQDETEKLFRKLIRLDNLFAYWNVKSQMFYLTNYDDSLDSLKNGVV
DDNIVPEGYDFVFRPISANAKLQMNRRSDFDFSAPKINLDVELHDIAIEFNKPQYFSLME
LLESVDMMTQNLPYRKFRPDVPVHDHAREWWAYAIHGILEVNVCPRLRMWSWNHVREHRQ
KMKQYKELYKKKITSKKPPGELLSFLEELEKTLDVFNITVARQQAEVEVKKAGYKIYREG
TKDSEENKGWFNWLWTWSESKTEEQQPDVKPGSLEEILTPEEKTLLYEAIGYSETAVDPT
LPKSFEAMKFYVHLKSMSIVLREEQQKPELLDIVVEEFSACIVQRPGAQAIKFETKIDSF
HVTGLPDNSAKPRLLSSLDNATSLFRITFETNPLDETVAQRCIIEAEPLEMIYDARTVNS
IVEFFRPPKEVNLAQLTSATLTKLEEFREKTATGLLYIIETQKVLDLKINLKASYVIIPQ
DGVFSPTSNLLLLDLGHLKVTSKSRSELPDMKQGGAKLEEIMDRAYDSFDIQLTSIQLLY
SRVGDNWKEARKLSESTQHILVPLHFNVEFSKAIVFMDIRMPKFKIFGKLPLISLRISDK
KLQGILELIESIPKPTPATEVHAPVKPFQIQRSSSLGASQISQKVLPLLELKCVEEESEE
EFYDAPCSPLEEPYQPTIKVKSYQQKECQKLDYSKNVIQYKIRFEVPEVSIQFYHLVEDC
ELPVVEIVVLGLGTEVELRTFDLKANAFLKEFCLKCPEYFDKNKKPVYLITTLDNTMEDL
LTLEYVKAENNVPNLNTYSNVAQLIKVNFSSLDIHLHTEALLNTINYFNNILPQLEEKSA
SVYVADTEDKGGVIKKISSKRSRNDDIITLQILAELSCLQIFIQDQKRTISEIKIEGLDS
EIIMRPSVTEINAKLRNIIVLDSDITALYKKAVYITGKEVFSFKIISYVDATAGSAYTDM
SVVDIQVNLTVGCIEVVFVTKFLYSILAFIDNFQAVKEALAEATVQAAGMAATGVKELAQ
RSSRLALDVNIKAPVVVIPQSPVSENVFVADFGLITMTNTFHMIKGQSNPPPIIDLITIK
LSEMRLYRSQFINDTYQEVLDLLLPLNLEVIVERNLSWKWYQEVPCFNVNAQLKPMEFIL
SQEDITTIFKTLYGNIWYEDDRVLPAGIKDQNSVTSGVNNTSHHSGGTTVVTAAVVEVHS
RASQVKTTLNMSFRTDYLTMVLYSPGSEKTSFADVRDPALKLAEFKLENIISTLKMYTDD
STFSAFSLKNCILDDKRPHVKKATPRMIGLTVGFDKKDMMDVKYKRVRDGWVTDLVLQET
YICASVEFLLTVANVFLEAYTTGSAVETNVQAWTAKEEAPTQEQVKWEVNIIIKNPEIVF
VADMTRNDAPALVITTQCEICWKGDLENNTMTAAIKDLQMRACPFLPDKRKDKITTVLQP
CDLFYQATQIGRDPQVIDISVKSLTLKVSPVIINTVITITSALYTTKETIPQETSSSTAH
LWEKKDIKNLKMWFLEEPNEVQNIAPTTELVPKGERIKMNIDSIFIVLEAGIGHRTVPML
LAKSCFSGEGKNWSTLINLHCQLELEVHYYNEMFGVWEPLLEPLEIDQTEEFRPWNLGIK
MKKKAKQAIVESDAEEENYKVPEYKTVISFYSKDQLNITLSKCGIVMLNNLAKAFTEAAT
GSSDVFIRDLAPFMILNSLGLTISVAPSDSFSVLNVPMAKSYVLKNEESLSMDYVRTKDS
DHFNAMTSLSSKLFFILLTPANHSTADKIPLTKVGRRLYTVRHRESGVERSIVCQIDTVE
GSKKVTVRSPVQIRNHFSIPLSVYEGDTLLGMATPGNEFNIPLASYRSLLYLKPEDEDYQ
MCEGIDFEEIIKNDGTFIKKKCTPINPSKKPFIINVVPEKDNLTSLSVYSEDGWDLPYLI
HLWPPILLRNLLPYKIAYYIEGNEHRVFTLNEGCSAHICTVQLDKAKIHLKLLDYLNHDW
KSEYHIKPNQQDISFINFTCVTEIEKTDLDIAIHVTYNPGQTVVAFHSPYWMVNKTGRML
QYKADGIHRKHPPNYKMPVLFSFQPKHFFNNNKVQLMVTDSELSDQFSIDTVGSHGAVKC
KALKMEYQVGVTIDLSSFNITRIVTFTPFYMIENKSKYRISVADEGNGTWLSLDLGQCIP
FWPEDASNKLLIQVERSKGPPKKIHFNKQENCILLRLDNELGGIIAEVNLAEHSTVITFS
DYHDGAATFLLINHTMNNIIEYKQSSLTEIEDSLPPGKAVFYTWADPVGARNLKWKCGKC
YGEVTQKEDMMTAINSGEKTIYLVSFFEGLQRIILFTEDPKVFKVTYENEKAELAEQEIV
LALQDVGISLVNNYTKQEVAYIGITSSDVVWETKPKKKARWKPMSVKHTEKLEKEFKEYI
ESSPSEDKVIELDTNTPVVFTPSGINMKILQPHEIAIRRNYLPALKVEYNTSAHQSSFRI
QIYRIQIQNQIHGAVFPFVFYPVKPPKSVTMDSEPKPFTDVCIVMRSAGHSQITRIKYFK
VLIQEMDLRLDLGFVYALSDLMTEAEVTEKTEIELFHKDIEVFQEEYKTVSLVDSSQVSL
YEYFHISPIKLHLSVSLSSGKEAAEESEQRGGFIAIRSLNLLLKSIGATLTNVQDVVFKL
AFFELNYRFHTTSELQSEVVRHYSKQAIKQMYVLVLGLEVLGNPFGLIREFSEGVEAFFY
EPYQGAIQGPEEFMEGVALGLKALVGGAVGGLAGAASRITSAMAKGVAAMTMDEDYQQKR
REAMNKQPAGLREGITRGGKGLVSGFVSGITGIVTKPIKGAQKGGAAGFLKGVGKGLVGA
VARPTGGIIDMASSTFQGIKRATDTSDEVQSLRPPRFFNEDGVIRPYRLRDGTGNQMLQV
IENGRFAKYKYFTHVMINKTDMLMITKSGVLFVTKGTFGQLTCEWQYSFDEFTKEPFIVH
GRRLRIEAKERVKSVFHAKEFGKIINFKTPEDAKWILSKLEEAREPSPSP
NT seq
9513 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgagtcggtggtcgtggatgtgttgaaccggttcttgggggactatgtggtg
aacctggacacgtcccagctcactctgggcatctggggaggagctgtggccctgaagaac
ctggaaattaaagaaaatgccctgagtcaattggatgtgccatttaaaattaaagttggt
catataggtaatctaaatcttaaaattccatggaaaaacctttatactcaaccagttgta
gctgtactggaaaacatttatttactcatagtgccttcttctataataaaatatgatcct
ttaaaagaagaaaagcaactcttggaaacaaagcaacaggaactaaaaaggatagaagaa
gcaaaacaaaaagtagctgatcaagaaaagcagctggtggagagacaggacacttttaca
gaaaaattaattacccagatcataaaaaatcttcaagtgaaaatttccaacatccatatt
cgttatgaagatgatatcacaaatcgagaaaacccactgtcatttggtatttcccttcaa
aatctcagcatgcagacaactgatcaaaactgggttccttgtttacaggatgaaactgag
aagctgtttcggaagttgattcgattggataacctttttgcctattggaatgtgaagtct
cagatgttttaccttactaattatgatgattcattggacagcttgaagaatggcgttgtt
gatgacaatattgttccagaaggttatgattttgtatttcgccccatatctgctaatgct
aaacttcagatgaatcgccgatctgattttgacttttctgcccccaagataaacctggat
gttgagttacatgacatagcgattgaatttaataaaccacagtatttcagtcttatggag
cttcttgaatcagtagatatgatgacgcaaaatctgccatataggaaattcagacctgat
gtacctgttcacgatcatgccagagaatggtgggcttatgctatacatggtattcttgaa
gtaaatgtttgcccccgcttacggatgtggtcatggaaccatgttagagaacacagacaa
aaaatgaagcaatacaaagagctatataagaaaaaaataacaagtaagaagccacctggt
gaacttctcagctttttggaggagttggaaaagaccctggatgtatttaatataactgta
gcaagacaacaagcagaagttgaggtaaagaaagcaggatacaagatttacagagaagga
acaaaagattcagaggaaaataaaggatggtttaactggttgtggacttggtcagaatca
aaaactgaagaacagcagccagatgttaaacctggaagtctggaagaaatcttgacacct
gaagaaaaaactttactttatgaagcaattggctatagtgaaactgcagttgatccaacc
ttgccaaaatcatttgaagccatgaagttttatgtacacttgaaaagtatgtctattgtt
ctaagagaagaacaacaaaaacctgagctcttagatattgtagtagaagaatttagtgct
tgcattgtacaaagaccaggagcacaagcaattaaatttgaaaccaaaatagattccttt
catgttactggcctaccagacaattcagcaaaaccccgcctcctgtcttcattggataat
gctacgtcacttttccggattacatttgagacaaatccattagatgaaactgttgctcaa
aggtgtattatagaagctgaacctttagaaatgatctatgatgccagaacagtgaatagt
atagtggaattcttcagacctccaaaagaggtaaatctagcacagctcacttcagcgact
ttgacaaaactggaagaatttcgtgagaagacagcaacaggtctgctgtatattattgaa
acacagaaagttcttgatctcaaaattaatctgaaagcttcatatgttattatcccacaa
gatggagtttttagccctacatcaaatctgcttcttttggaccttggtcatttaaaggtg
acaagcaaaagtcgctcagaattaccagatatgaaacaaggtggggccaaacttgaagag
ataatggatagagcttacgattcctttgatattcagcttacaagcatacagctgctttac
agcagagttggtgataattggaaagaagcacgaaaactcagtgaatctacacaacatatt
ttggtacctctgcacttcaacgtggaattctcaaaagccattgttttcatggatataagg
atgcctaaattcaagatttttggaaagttaccactgatttctttaagaatttcagataaa
aaactgcaagggattttggaattgattgaaagcattccaaaacccacacctgcaactgaa
gtgcatgcccctgtcaaaccatttcagatacaaagatcctcttctttgggagcatcacag
atttcacagaaagtgcttcctctattggaacttaaatgtgttgaagaagaatcagaagag
gaattttatgatgcgccatgtagtcctttggaagaaccttatcagccaacaatcaaagtt
aaaagttatcaacaaaaagagtgtcaaaagctggattattcaaaaaatgtgattcagtat
aaaataagatttgaagtaccagaggtatcgattcagttttatcaccttgttgaagactgt
gagctccctgtggtagaaattgttgtcttaggattgggcacagaagtagagcttagaaca
tttgatttgaaagccaatgcctttttgaaagaattctgcttgaaatgtccagaatacttt
gataaaaacaaaaaaccagtttatttgattacaacactggataacacaatggaagatctg
ttaaccctggaatatgtgaaggctgaaaataatgtacccaacttgaatacctatagtaat
gttgcacaactgattaaggtgaatttttcctctttggatattcatttgcatactgaagca
cttctgaatacaataaattattttaataatattcttccacaattggaggaaaaatcagcc
tcagtgtatgttgcagacactgaagacaaaggaggggtcattaaaaaaatatcatcaaaa
cgatccaggaatgacgatattattaccctgcagattttagcagaattgtcatgtttacag
atttttattcaagatcagaaacgtaccatttctgaaattaagattgaagggcttgattct
gagataattatgaggccttcagtaactgaaataaatgcaaagctaaggaatataattgtg
ttggattctgatataacagctctatacaaaaaggctgtttatatcactggaaaagaagtt
ttcagcttcaaaattatttcttacgtggatgcaactgctggttctgcgtatacagatatg
agtgtggttgacattcaagtaaatttaaccgttggttgcatcgaagtagtttttgtcaca
aaatttttatattctatactggcatttatagataattttcaagcagttaaagaagccttg
gctgaggcaactgttcaggcagcgggaatggctgctactggtgtaaaagaactggcacaa
agaagttctagattggcattagatgttaatatcaaagccccggttgtggtcattccacag
tctcccgtttctgaaaatgtttttgttgctgattttggactaattacaatgaccaataca
tttcatatgataaagggccagagcaaccccccacccattattgatttgattacaataaaa
ctgagtgaaatgcgattatataggtctcaattcattaatgatacataccaggaagtgttg
gatctactgctgccattaaatcttgaggtgattgttgaacgaaatttatcctggaagtgg
taccaggaagttccttgttttaatgtaaatgctcaactaaagcccatggagtttattctt
agtcaagaagatataacaactatttttaagacattatatggtaatatatggtatgaagat
gatcgtgtcttaccagcaggaataaaagatcagaacagtgttactagtggagtaaataac
acttcacatcattcaggaggaacaactgtagtgacagctgctgtggtagaagtacattca
cgtgcctctcaagttaagacaacactaaatatgagtttcagaactgattatctcaccatg
gtactgtatagtccaggctctgaaaagacttcctttgcagatgttcgtgatcctgctctg
aaacttgctgaatttaagttggagaatataataagcacattaaaaatgtatacagatgac
tcaacattttctgccttctcattaaaaaactgtattttagatgataaaaggcctcatgtc
aagaaggcaactcctagaatgataggactgacagttggatttgacaaaaaggacatgatg
gatgtaaaatataagagagtcagagatggttgggtgactgatttagtccttcaagaaacg
tatatttgtgcaagtgtggaatttctgctgacggttgcaaacgtctttcttgaggcctac
accacaggcagtgctgtagaaaccaatgttcaagcgtggactgctaaggaagaagcacct
acacaagaacaagtaaagtgggaagttaatattattattaaaaaccctgaaattgtgttt
gtggctgatatgacaagaaatgatgctcctgccttagtcattacaacacagtgtgaaatt
tgttggaagggtgaccttgagaacaacacaatgactgctgctattaaagatctccaaatg
agagcatgcccattccttccagacaagagaaaagacaaaatcactacagtgttgcagccc
tgtgacttgttctaccaagctactcagatagggagagatccacaagtcattgatatatca
gtaaaatctctgacactaaaggtttcaccagttatcataaataccgtgattaccataact
tcagcactctatacaactaaggaaactatcccacaagaaacttcttcttctacagcacat
ttatgggaaaagaaggatataaagaatttaaaaatgtggtttcttgaagaaccaaatgaa
gttcaaaatatagctcccacaactgaattagttcccaaaggagagagaataaaaatgaac
attgattctatttttatagttcttgaggctggaattggtcatagaacagtgcctatgctt
ttggcaaaatcatgtttttcaggggaaggcaaaaactggagtaccctcataaatctccac
tgtcagctagagctagaagtgcattattacaatgaaatgtttggtgtatgggaacctttg
cttgaacccttagaaattgatcagactgaggaatttagaccgtggaatcttggaatcaag
atgaaaaagaaagcaaaacaggccattgttgaatcagacgctgaagaagaaaattacaaa
gtgccagaatataaaactgttatcagtttctattcaaaagaccaactaaatattacatta
tccaaatgtggtattgtaatgttaaataatttagccaaggcatttacagaagctgccact
ggatcttcagatgtcttcataagggatctagcgccctttatgattttaaattctcttgga
cttaccatctctgttgcaccaagtgattcttttagtgtactcaacgttccaatggcaaaa
tcatatgtattgaaaaatgaggagagtttaagtatggactatgtccgaacaaaagacagt
gatcatttcaatgcaatgaccagcctaagcagcaaacttttcttcattcttcttacacct
gccaatcactctactgctgataaaattcctttaacaaaagtgggacgcagactgtacact
gtaagacacagagagtctggagtggaaagatctattgtttgtcaaatcgatacagtggaa
ggaagtaagaaggtaacagttcgctcccctgtgcagattagaaatcatttttcaatccca
ctttcagtttatgaaggagatactttattgggaatggctacacctggaaatgaatttaac
ataccattagcatcttaccgatcactgctttatctgaagccagaagacgaggactatcaa
atgtgtgaaggaattgactttgaagaaattataaaaaatgatggcacttttataaagaag
aaatgtacacctataaacccttctaagaaaccatttattattaatgttgtcccagaaaaa
gataatttgacatctctgtcagtgtattcagaagatggttgggacttaccatacctaata
catttgtggccacctatcctactccggaatcttcttccttacaaaattgcttattatatt
gaggggaatgaacatagagtttttactctaaatgaaggatgttctgcccatatttgtact
gtgcagttggataaagccaagatacatttaaaattacttgactatcttaatcatgattgg
aaaagtgaatatcatataaaacctaatcaacaagatatcagtttcatcaattttacctgt
gttacagaaatagaaaagactgatttagatattgctatccatgtgacttataatcctggc
cagacagttgtggcatttcatagtccttattggatggtcaataaaactggtcgaatgtta
caatataaagcagatggaattcatcgaaagcatccacctaattataaaatgccagttctc
ttttcttttcagcccaagcacttttttaataacaataaggttcagcttatggtaactgac
agtgaattgtcagatcagttttcgattgatactgttggtagtcatggagctgttaaatgt
aaagccctgaaaatggaatatcaagttggtgtcactattgaccttagcagttttaatatc
accagaattgtgacatttacccctttttatatgattgaaaacaaaagcaagtatcgtata
tcagtggctgatgagggaaatggtacatggctttctcttgatttggggcagtgtatcccc
ttttggcctgaggatgcttcaaataaacttcttattcaagttgaaagaagtaaaggccct
ccaaaaaagatacattttaacaagcaagaaaattgtattttattgcgtctggataatgag
ctaggaggtattatagctgaagttaatttggctgagcattctacagttattacattttca
gattatcatgatggagcagctactttcctgttaataaatcacactatgaataacattatt
gaatataagcaaagttctctcactgaaatagaagattctctccctcctggaaaagcagta
ttttatacgtgggccgatccagttggcgctagaaaccttaagtggaaatgtgggaaatgc
tatggtgaagtgacccaaaaggaagatatgatgacagctataaattcaggggaaaaaact
atttatttagtttcattctttgaaggcttacagcgcattattttattcactgaagatcca
aaggtatttaaagtgacatatgaaaatgaaaaagcagaattagcagagcaagaaattgtt
ttggcattacaagatgttggaatttctctcgtcaacaattacacaaagcaagaagtagcc
tatattggcattacaagctctgatgtggtttgggagacaaagcccaagaagaaggcaaga
tggaagccaatgagtgtaaagcacactgagaagttagagaaagaatttaaggaatatatt
gaatcttcaccttcagaagataaggttattgagttggacactaatactccggttgtcttt
acacctagtggtattaacatgaaaattctgcaaccacatgaaatagctatacgaagaaat
tatctgccagcattgaaagtggaatataacacatctgcacatcaatcatcatttagaatt
caaatttatagaatacagatccaaaaccaaatacatggtgctgtatttccatttgtattt
taccctgttaagccccccaagtctgtcaccatggattcagaaccaaagcctttcacagat
gtctgtattgtcatgagatctgcagggcactcccagataacacgtattaagtacttcaaa
gtgttgatccaggaaatggatctaaggttagatcttgggtttgtctatgctttatcagat
cttatgacagaagctgaagtaaccgaaaaaacagagattgaactttttcataaagatata
gaagttttccaagaagaatataaaacagtgtcattagtagattcatcacaagtcagtctc
tatgagtactttcatatatctcctatcaagttgcatttaagtgtttcactgagttcgggt
aaagaagcagctgaagaatcagaacaacgtggaggatttattgcaattcgttctttaaat
cttttgctgaagagtatcggtgccactctcacaaatgtacaagatgtagtttttaagctt
gcattttttgaactcaactatcgatttcatacaacatctgaactacaatctgaagtagta
agacactattcaaaacaggccattaagcagatgtatgtactcgttcttggacttgaagtt
ttggggaatccttttggcttaattagagaattttctgaaggtgtagaagcatttttctat
gaaccttaccagggagccatccagggtcctgaagagtttatggagggagtggcactagga
ttgaaggcattagttggtggagctgttggtggattagccggtgctgcctccagaatcacc
agtgctatggcgaaaggggtagccgctatgaccatggatgaagactaccaacagaagaga
agagaagccatgaataagcaaccagctggtcttagagaaggcatcactcgtggaggaaaa
ggtttagtttctggttttgtaagtggcataacaggaattgttacaaaaccaatcaaagga
gctcaaaaaggaggagcagctggtttccttaaaggtgttggcaaaggtttagttggagca
gtggcaaggccaactggaggcatcatagacatggctagcagtacatttcagggaataaaa
agggctacagatacttctgatgaagtgcagagtctgcgaccccctaggttctttaatgaa
gatggagttatcagaccttataggctgagggatggtactggaaatcaaatgttacaggtc
atagaaaatggaagatttgcaaaatacaaatattttacccatgtcatgatcaataaaaca
gatatgttaatgataaccaaaagtggtgtattatttgtaacaaaaggaacatttggacag
cttacctgtgagtggcagtacagttttgatgagtttaccaaagagccatttattgttcat
gggagaagattgcgcattgaggcaaaggaacgagtgaagtctgtattccatgccaaagag
tttggaaaaataattaactttaagactccagaggatgctaagtggatcctatcaaaacta
gaagaagcaagagagccttccccaagcccgtga
DBGET
integrated database retrieval system
