Pteronotus mesoamericanus (Parnell's mustached bat): 129078285
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Entry
129078285 CDS
T09558
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Pathway
ppam03082
ATP-dependent chromatin remodeling
ppam04714
Thermogenesis
ppam05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129078285 (SMARCA2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
129078285 (SMARCA2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
129078285 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppam03021
]
129078285 (SMARCA2)
03036 Chromosome and associated proteins [BR:
ppam03036
]
129078285 (SMARCA2)
Transcription machinery [BR:
ppam03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
129078285 (SMARCA2)
Chromosome and associated proteins [BR:
ppam03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
129078285 (SMARCA2)
Chromatin remodeling factors
BAF complex
129078285 (SMARCA2)
PBAF complex
129078285 (SMARCA2)
GBAF(ncBAF) complex
129078285 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
129078285
NCBI-ProteinID:
XP_054439037
LinkDB
All DBs
Position
Unknown
AA seq
1574 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPTM
GSTDFPQEGMHQMHKPMDGMHDKGIVEDIHCGSMKGTGMRPPHPGMGPPQSPMDQHSQGY
MSPHPSPLGAAEHISSPMSSGGGPTPPQMAPNQPGPLIPGDPQAMNQPNRGPSPFSPVQL
HQLRAQILAYKMLARGQHLPETLQLAVQGKRTLPGMQQPQQPPPQQPPPQPQPQQQQQAL
VNFNRPSGPGPELSGPSTPQKLPVPAPSGRPSPAPPAAAQPPTAAVPGPSVPQPAPGQPS
PILQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLPGSLPPDLRTKA
TVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQ
KIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETE
RIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEK
KKRRRRKKKAEENAEGGESALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQ
LDAWLEMNPGYEVAPRSDSEESDSDYEEEDEEEESSRQETEEKILLDPNSEEVSEKDAKQ
IIETAKQDVDDEYSMQCSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMV
SLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWA
PSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRM
KNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAP
FAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKI
LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYS
NGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRL
DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQA
QDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAF
LQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLME
EDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAIEDGNLEE
MEEEVRLKKRKRRRNVDKDPAKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVIN
YKDRCNVEKVPSNSQLEIEGNSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERI
RNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEEES
NEEEEEDDEEESESEAKSVKVKIKLNKKDEKVRDKGKGKKRPNRGKAKPVVSDFDSDEEQ
DENEQSEASGTDDE
NT seq
4725 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcccacagaccctggagcgatgccccacccagggccttcgccggggcccgga
ccctctcctggaccaattctcggacctagtccagggcctggaccatccccaggttctgtc
cacagtatgatggggccaagtcctggacctccaagtgtctcgcaccccatgcctacaatg
gggtctactgacttcccacaggaaggcatgcatcaaatgcataagcccatggatggaatg
cacgacaaggggattgtagaagacatccattgtgggtccatgaagggcaccggtatgcga
ccacctcacccggggatgggccctccccagagcccgatggatcagcacagccaaggctac
atgtcaccgcacccatctcccttgggagccgcagaacacatctccagccctatgtcgtcg
ggaggcggccccaccccaccccagatggcgccaaaccagccggggcccctcattcctgga
gatccgcaggcgatgaaccagcccaacagaggtccctcgccttttagtcctgtccagctg
catcagctgcgagctcagattttagcgtacaaaatgctggcccgcggccagcacctccct
gaaacactgcagcttgcagtccaggggaaaaggacgttgcctggcatgcagcagccgcag
cagccaccaccgcagcagccacccccccagccacagcctcagcagcagcagcaggccctt
gttaacttcaatagaccatctggccccgggccggagctgagcggcccgagcaccccgcag
aagctgccagtgcccgcgcccagcggccggccctcgcccgcgccccccgcagccgcgcag
ccgcccacggccgccgtgcccgggccctctgtgccgcagcccgcccccgggcagccctcg
cccatcctgcagctgcaacagaaacagagccggatcagccccattcagaaacctcaaggc
ctggaccccgtggagattctgcaggagcgggaatatagacttcaggctcgcatagctcac
aggatacaagaactggaaaatctgcctggctctttgccaccagatttacgaaccaaagca
accgtggaactgaaagcacttcggttactcaatttccaacgtcagctgagacaggaggtg
gtggcctgcatgcgtcgggacacgaccctggagacggcgctcaactccaaagcctacaag
cggagcaagcgccagaccctgagggaggcccgcatgacggagaaactggagaagcagcag
aagattgagcaggagaggaagcgccggcagaagcaccaggaatacctgaacagtattttg
caacatgcaaaagatttcaaggagtaccatcgctcagtggctgggaagatccagaagctt
tccaaagcagtggcaacttggcacgccaacactgagagggagcagaagaaggagacagag
aggatcgaaaaggagagaatgcgcagattaatggccgaagatgaagagggctacagaaaa
ctgattgatcaaaagaaagacaggcgtttagcttaccttttacagcagactgatgagtat
gtggccaacctgaccaacctggtttgggagcacaagcaagcccaagcagccaaagagaag
aagaagaggaggaggaggaagaagaaggctgaagagaatgcagagggaggggagtctgcc
ctgggaccagatggagagcccatcgatgagagcagtcagatgagtgaccttcctgtcaaa
gtaactcacacagaaactggcaaagtcctatttggaccagaagcacccaaagcaagtcag
ctggacgcctggttggaaatgaatcctggttacgaagttgcccccagatctgacagcgaa
gagagtgattctgactatgaggaggaggatgaggaagaagagtctagtcggcaggaaact
gaagagaaaatactcctggatccaaacagtgaagaagtttccgagaaggatgctaagcag
atcattgagacagctaagcaagacgtggatgatgaatacagcatgcagtgcagtgccaga
ggctcccagtcctactacacggtggctcatgccatctccgagcgggtggagaagcagtct
gccctcctcattaacgggactctgaagcactaccagctccagggcctggaatggatggtt
tccctgtataataacaatttgaacggaatcttagctgatgaaatggggctgggaaagacc
atacagaccattgcactcatcacttatctgatggagcacaaaagactcaatggcccctat
ctcatcattgtccccctctcgactctatctaactggacatatgaatttgacaaatgggct
ccttctgtggtgaaaatttcttacaagggcacccctgccatgcgtcgctctcttgtcccc
cagctaagaagtggcaaattcaatgtcctcttaactacttatgagtacattataaaagac
aagcacatccttgcaaagattcggtggaaatacatgatcgtggatgaaggccaccgaatg
aagaatcaccactgcaagctgactcaggtcttgaacactcactatgtggcacccaggagg
atccttctgacagggaccccactgcagaataagctcccagaactctgggctctcctcaac
ttcctcctccccacaatttttaaaagctgcagcacattcgaacagtggtttaatgctccg
tttgccatgactggagaaagggtggacttgaatgaagaagaaactatattgatcatcagg
cgtctacacaaggtgttgagaccatttttactgaggagactgaagaaagaagttgaatcc
cagcttccagaaaaagttgaatatgtgatcaagtgtgacatgtcagctctgcagaagatt
ctgtaccgccacatgcaagccaaagggatcctcctcacagacggttctgagaaagataag
aaggggaaaggaggtgctaagacactgatgaacactatcatgcaattgagaaaaatctgc
aatcacccatatatgtttcagcacattgaggaatcctttgctgaacacctgggctattca
aatggggtcataaatggggctgagctgtatcgggcctcaggaaagtttgagctacttgat
cgtattctgccaaaattgagagcgactaatcatcgcgtgctgcttttctgccagatgacg
tctctcatgaccatcatggaggattactttgcttttcggaacttcctttacctgcgcctt
gacggcaccaccaagtcggaagatcgtgctgctttactgaagaaattcaacgaacctggg
tcccagtatttcattttcttgctgagcacaagagccggaggcctgggcttaaacctccag
gcagccgacaccgtggtcatctttgacagcgactggaaccctcatcaggacctgcaagca
caggaccgagctcaccgcatcggccagcagaacgaggttcgcgtgctgagactctgcact
gtgaacagcgtggaggaaaagatcctggcagctgccaagtacaagctgaatgtggatcag
aaagtgatccaggcgggcatgttcgatcagaagtcttcgagccacgagcgcagggcgttc
ctgcaggccatcttggaacatgaagaagaaaatgaggaagaagatgaagtaccagatgat
gagactctgaaccaaatgatcgcccgacgagaagaagaatttgatctctttatgcgtatg
gacatggatcggcggagggaggatgcccggaacccaaagcgcaagcctcgcttaatggag
gaagatgagctgccctcctggattattaaagatgatgctgaagtagaaaggcttacatgt
gaagaagaggaggagaaaatatttggtagggggtctcgccagcgccgggacgtggactac
agcgatgccctcactgagaagcagtggctgcgggccattgaagacggcaatttggaagaa
atggaagaagaagtacggcttaagaagcgaaaaagacgaagaaatgtggataaagatcct
gcaaaagaagatgtggaaaaagctaagaagagaagaggccgccctccagcggagaaacta
tcaccaaatccccccaaactgacaaagcagatgaacgctatcatcgatactgtgataaac
tacaaagacaggtgtaacgtggagaaggtgcccagtaattctcagttggaaatagaagga
aacagttcagggcgacagctcagtgaagtcttcattcagttaccttcaaggaaagaatta
ccagaatactatgaattaattaggaaaccggtggatttcaaaaaaatcaaggaaagaatt
cgtaatcataagtaccggagcctgggagacctggagaaagatgtcatgcttctctgtcat
aacgcgcagacgttcaacttggagggatctcagatctatgaagactccatcgtcttacag
tcggtgtttaagagcgcacggcagaaaattgccaaagaagaagagagtgaggaagaaagc
aatgaagaggaggaggaagatgatgaggaggagtcagagtcggaagcaaaatctgttaag
gtgaaaatcaagctcaataaaaaagatgagaaagttcgggacaaaggaaaaggcaagaaa
aggccaaatcgaggaaaagccaaacctgtcgtgagcgatttcgacagtgacgaagagcag
gatgaaaatgaacagtcagaagcaagcgggactgatgatgagtga
DBGET
integrated database retrieval system
