Pteronotus mesoamericanus (Parnell's mustached bat): 129079218
Help
Entry
129079218 CDS
T09558
Symbol
NUP188
Name
(RefSeq) nucleoporin NUP188 isoform X1
KO
K14311
nuclear pore complex protein Nup188
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Pathway
ppam03013
Nucleocytoplasmic transport
ppam05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129079218 (NUP188)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
129079218 (NUP188)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppam03019
]
129079218 (NUP188)
Messenger RNA biogenesis [BR:
ppam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129079218 (NUP188)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Nup188_SH3-like
HEAT_SCC3-SA
Motif
Other DBs
NCBI-GeneID:
129079218
NCBI-ProteinID:
XP_054440230
LinkDB
All DBs
Position
Unknown
AA seq
1755 aa
AA seq
DB search
MAAAAGEQCVRSSRELWTILLGRSALRELNHIEAELNKHWQRLLEGLSYYKPPSPNSAEK
VKANKDVVSPLKELGLRISKFLGLDEEQSVQLLHCYLQEDYRGTRDSIKTVLQDERQSQA
LILKIADYYYEERTYILRCVLHLLTYFQDERHPYRVEYADCVDKLEKELVTKYRQQFEEL
YKTEAPTWETHGNLMTERQVSRWFVQCLREQSMLLEIIFLYYAYFEMAPSDLLVLTKMFK
EQGFGSRQTNRHLVDETMDPFVDRIGYFSALILVEGMDIESLHKCALDDRRELHQFAQGG
PICQDMDRLMLTFGDIPHHAPVLLAWALLRHTLNPEETSSVVRKIGGTAIQLNVFQYLTR
LLRSLASGGNDCTTSTACMCVYGLLSFALTSLELHTLGNQQDVIDAACEVLADPSLPELF
WGTEPTSGLGIILDSVCGMFPHLLSPLLQLLRALVSGKSTAKKVYSFLDKMSFYNELYKH
KPHDVISHEDGTLWRRQTPKLLYPLGGQTNLRIPQGTVGQVMLDDRAYLVRWEYSYSSWT
LFTCEIEMLLHVVSTADVIQHCQRVKPIIDLVHKVISTDLSIADCLLPITSRIYMLLQRL
TTVISPPVDVIASCVNCLTVLAARNPAKVWTDLRHTGFLPFVAHQVSNMSQMISAEGMNA
GGYGTLLMNCEQPQGEYGVTIAFLRLITTLVKGQLGSTQSQGLVPCVMFVLKEMLPSYHK
WRYNSHGVREQIGCLILELIHAILNLCHETDLHSSNTPSLQSLCICSLAYTEAGQTVINI
MGIGVDTIDMVMAAQPRSDGAEGQGQGQLLIKTVKLAFSVTNNVIRLKPPSNVVSPLEQA
LTQHGAHGNNLIAVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGNDAAAIRDA
FLARLQSKIEDMRIKVMILEFLTVAVETQPGLIELFLNLEVEDGSNGSKEFSLGMWSCLH
VVLDLIDSQQQDRYWCPPLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTSPLFGT
LSPPSETSEPSILETCALIMKIICLEIYYVVKGSLDQSLKDTLKKFSSEKRFAYWSGYVK
SLAVHTADTEGSSCTSLVEYQMLVSAWRMLLIIATSHAEIMHLTDSAVRRQLFLDVLDGT
KALLLVPASVNCLRLGSMMCTLLLILLRQWKRELGPVDEILAPLTEILEGVLQADQQLME
KTKAKVFSAFITVLQMKEMRVSDIPQYSQLVLNVCETLQEEVIALFDQTRHGLASGSAAE
DKDSMDTDDCSRPRHKDQRDGQVCVLGLHLAKELCEVDEDGDSWLQVTRRLPILPTLFTT
LEVSLRMKQNLHFTEAAFHLLLTLARTQQGATAVAGAGITQSICLPLLSVYQLSTNGTVQ
TPSTSRKSLDAPSWPGVYRLSISLMERLLKTLRYNFLTEALDFVGVHQERTLQCLNAVRT
VQSLACLEEADHTVGFILQLSSFMKEWHFHLPQLLRDVQVNLGYLCQACTSLLHSRKMLQ
HYLQNKNGDGVPSAVAPRVQRPSTAAPAAPSSSSSSSSKQPTADTEASEQRALHVVQYGL
LKILSRTLAALRHFTPDVCQILLDQSLDLAEYNFLFALSFTTPTFDSEVAPSFGTLLATV
NVALNMLGELDKKKEPLTQAVGLSTQAEGTKTLKSLLMFTMENCFYLLISQAMRYLRDPA
VHPRDKQRMKQELSSELSTLLSSLSRYFRRGAPSSPAAGILLSPQGKSTSLPKASPESQE
PLIQLVQAFVRHVQR
NT seq
5268 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgccgccggtgaacagtgtgtgaggagcagtagagaactgtggacaattctg
cttggaagatcagctctgagagaactgaatcatattgaggcagaactgaataaacattgg
cagcgacttttggaagggctttcttactataaacctcccagtccaaattcagctgaaaaa
gtgaaagctaataaagatgtagtttcaccactgaaggaactgggtttaagaatcagcaag
tttttgggtcttgatgaagaacagagtgtgcagttactccattgttaccttcaagaggat
tacagaggtactcgggactcaataaagacggtactgcaagatgagaggcagagtcaggcc
ttaatcttgaagattgcagattattactatgaagaaagaacatacattcttcgttgtgtc
ttacaccttctcacttatttccaagatgaaagacatccatatagggttgaatatgcagac
tgtgttgataaattggagaaggaattagttacaaaatatagacagcagtttgaagagctt
tataaaactgaagcaccaacatgggagacacatggcaacctcatgactgaacgccaggtg
tctcgctggtttgtccagtgccttcgggaacagtccatgctgctagaaattattttcctt
tattatgcatattttgaaatggcaccaagtgacctattggtattaactaagatgtttaaa
gaacaaggattcggtagtaggcagaccaacaggcacctggtggatgaaaccatggatcct
tttgtggatcggattggctacttcagtgcccttatcctggtggaaggcatggatattgag
tccttgcacaagtgcgccttggatgacagaagagaactgcaccagtttgcccagggtggg
cctatttgtcaggatatggaccgtctgatgttgacctttggggacattccgcatcatgcc
ccagtgcttctggcctgggctctcctccgccacaccttgaatccggaagagacaagcagt
gttgtccggaaaattggtggcacagccatccagctgaacgtatttcagtacttgacccga
ctgctccgctcactggccagtggaggaaatgattgtaccaccagcactgcatgcatgtgt
gtctatggactcctttcttttgccctgacctcactggagctgcatacactgggcaatcag
caggatgtaatcgacgcagcatgtgaggtcttggcagacccttctcttccagaactattc
tggggaacagagccaacctctggtcttgggatcattctggacagtgtatgtggaatgttt
ccccatctcctctccccactccttcaattgctgcgagccctcgtgtcggggaagtctact
gccaaaaaggtgtatagtttcttggataagatgtctttctacaatgagctctataagcac
aagccccacgatgtgatctcccatgaagatggaacgctgtggcggaggcaaacgcctaaa
ctcctttacccgcttggtggtcagaccaatcttcgcatacctcagggcactgtgggccaa
gtaatgctagacgacagggcttacttggtacgctgggaatattcgtatagcagctggact
ctctttacctgtgagattgaaatgctgcttcatgttgtttccactgcagatgtgattcag
cactgccagcgggtcaaacccatcatcgatctggtccataaggtcatcagtacagatctg
tcgatagcagactgtctcctgcccatcacgtctcgcatttacatgctgctacagcggtta
acgacagtgatctccccgcctgtggatgtcattgcttcttgtgtcaattgtttgaccgtt
ttggctgcccggaacccagcaaaggtttggactgatcttcgtcacacaggctttttacca
ttcgtggcccaccaggtctccaacatgagtcagatgattagtgcggagggaatgaatgct
ggagggtatggaacactcttgatgaattgtgaacagccccagggcgagtatggggtcact
attgcttttctgcggttgatcaccactcttgtcaagggacaacttggtagtacccagagc
caagggctggtgccctgcgtcatgtttgtgctaaaggagatgcttcccagctaccacaag
tggcgctacaactcgcacggtgtgagagagcaaattggttgcctgatcctggagctgatt
catgcgatactgaacctgtgccatgagacagacctgcacagcagcaatacccccagcctg
cagtctctctgcatctgtagcctggcctatacagaagcaggacagacagttatcaatatc
atgggcatcggtgtggacaccatcgacatggtgatggctgctcagccccgcagtgatggg
gcagagggccaggggcagggccagctgctgatcaagacagtgaaactggcattctccgtc
accaacaatgttattcggctgaaacctccttctaatgtggtgtctcccctggaacaggcc
ctcacacaacatggtgcccatgggaacaacctcattgctgttcttgccaaatacatctac
cacaaacatgaccctgctttgccacgtctggccatccagctgctgaaacgcctggccacg
gtggccccgatgtcagtgtatgcctgcttgggcaatgacgcagctgccattcgtgatgcc
ttcctggcccggttgcagagcaagattgaggacatgcgcatcaaagtaatgatcctggaa
tttctcacggtcgcagtggagacccagccaggcctcatcgagctgtttctgaaccttgag
gtggaggacggcagcaacggctccaaggagttcagccttgggatgtggagctgtctccat
gtggtgctggatctgattgactcccagcagcaggatcgctactggtgcccacccctgctg
caccgtgcggccattgcctttctgcatgccctgtggcaggaccggcgagacagtgccatg
ctcgtcctcaggaccaaacccaagttttgggagaatttaaccagtcccctgtttggaacg
ctttctcctccctcagaaacatctgagcccagcatcctggagacctgtgccctgatcatg
aagataatatgcttggagatatactatgtagtcaagggctcactagaccagtcattaaaa
gatacactcaagaaattttccagtgagaaacgctttgcctactggtcagggtacgtcaag
tctttggcagttcacacagccgacacagagggcagcagctgtacctccttggtagaatat
cagatgctggtctctgcctggaggatgcttctcatcattgccaccagtcacgcagagata
atgcacctgaccgactctgcagtgcgtcgccagctctttcttgatgtgcttgatgggacc
aaagcgttactcctggtcccagcctcagtaaactgcctccgccttggctccatgatgtgc
actctgctgcttatcctcctgcggcagtggaagagagagttaggtcctgtggatgagatc
cttgcacccttgacagagatcctagagggagtgctgcaggcagaccagcaactcatggaa
aagaccaaggccaaggtgttctcagcgttcatcactgtgctgcagatgaaggagatgaga
gtgagtgacatcccccagtattctcagctagtgcttaatgtctgtgaaaccctccaagaa
gaggtgattgcgctctttgaccagacccgccacggcttggcatcaggcagtgctgcagaa
gacaaggatagcatggatactgatgactgctcacggccccggcacaaggaccagcgtgat
gggcaggtgtgtgtcctgggcctgcacctggccaaggagctgtgtgaggtggatgaggat
ggtgactcgtggctgcaggtgacccgtaggcttcccatcctgccgaccctcttcaccacc
ctggaggtgagcctgcgcatgaagcagaacctgcatttcaccgaggcggcgtttcacctg
ctcctcaccctggctcgcacccagcagggagccacagcagtggctggagccggcatcacc
cagagcatttgtttgcccctcctgagtgtgtaccagctcagcaccaatgggacggtgcag
acacctagtacctctcggaagtccctggatgccccctcttggccaggggtctatcgtctg
tccatatcactgatggaacggctcctcaaaactctgcgctacaacttcctgactgaggcc
ctggactttgtgggtgttcaccaggagaggaccttacagtgcctcaacgcagtgaggacg
gtgcagagcctggcatgcctggaggaggcagaccacaccgtgggcttcattctgcagctt
tccagcttcatgaaggagtggcacttccacttgcctcagctcctgcgggacgttcaggtc
aacttgggttacctgtgccaggcctgcacctccctcctgcacagccggaagatgctgcag
cactacctgcagaacaaaaatggggacggcgtcccctcggctgttgccccccgcgttcag
cggccatccacagctgcccctgctgccccttcctcctcttcctcctcctcctctaagcag
cccactgctgacacagaggcttcggagcagcgagccttacacgtggtccagtatggcctc
ctcaagatccttagcaggaccttggcggccctgcgccacttcaccccagacgtctgccag
atcctgctggatcagtccctggaccttgctgaatacaacttcctgtttgccctgagcttc
accactcccaccttcgactctgaagtggccccttcctttgggacccttctggccacagtg
aatgtggccctaaacatgcttggagagctggataagaaaaaggagccccttacacaggct
gtggggttgagcacacaggcagaagggaccaaaacactgaagtccctcctgatgtttacc
atggagaactgcttctacctgctcatctcccaggcaatgcgttaccttagggacccggct
gtgcacccgcgggataaacagcggatgaagcaggagctcagctcagaattgagcacgctg
ctctccagcctctcgcgctacttccgcaggggagcccccagctcgcctgctgctggcatc
ctcctctcgcctcagggcaagtccacctctctccctaaggccagcccggagagtcaagag
ccactgatccagctagtgcaggccttcgtccggcacgtgcaaagatag
DBGET
integrated database retrieval system
