Pteronotus mesoamericanus (Parnell's mustached bat): 129079284
Help
Entry
129079284 CDS
T09558
Symbol
RC3H2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppam03000
]
129079284 (RC3H2)
04121 Ubiquitin system [BR:
ppam04121
]
129079284 (RC3H2)
Transcription factors [BR:
ppam03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
129079284 (RC3H2)
Ubiquitin system [BR:
ppam04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129079284 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_2
zf-RING_UBOX
zf-CCCH_4
zf-C3HC4_3
Prok-RING_4
zf-C3HC4
zf-C3HC4_4
zf_CCCH_4
DUF4844
Xin
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
129079284
NCBI-ProteinID:
XP_054440393
LinkDB
All DBs
Position
Unknown
AA seq
1189 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQSIKLSNLGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAVSPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKINATVRTFPLLNKVGVNNTVTTTAGNVISVI
GSTETTGKIVPSTNGISNAENSVAQLIPRNADSALRALETVKKVGKVSTNGQNAAGPSSE
SVTENKIGSPPKTPVSNVAATSAGPSNAGTELNSVPPKSSPFITRVPVYPQHSENIQYFP
DPRTQISFEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVPESSLPPASMPYADHYST
FSPRERMNTPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPPMYQRDDIIRSNSLPPMD
VMHSSVYQTSLRERYNSLDGYYSVACQQPSEPRTTVPLPREPCGHLKTSCEEPVRRKPEQ
WAQYHTQKAPLVSSTLPVATQSSTPPSPLFSVDFRTDLSESVSGTKFEEDHLSHYSPWSC
GTIGSCINVIDSEPRDVIANSNAVLMDLDSGDVKRRVHLFETQRRTKEEDPIIPFSDGPI
ISKWGAISRSSRTGYHTTDPVQATASQGSATKPISVSDYVPYVSAVDSRWSSYGNESTSS
AHYIERDRFIVTDLSCHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWSSLDEG
RHLTLNLLSKEIELRNGESDYTEDATDTKPDRDIELELSALDTDEPDGQSEQMEEILDIQ
LGISSQNDQLLNGMAVENGHPVQQPQKEPLEQKRQSLGEDHVILEEQKTILPVTSCFSQP
LPVSISSASCLPITTSVSVGDLILKTHVVSEDKNDFLKPVVANGKMVNS
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcagtggacagaatttctgtcctgtccaatctgctataatgaa
ttcgatgagaatgtgcacaaacccatcagtttaggttgctcacacactgtttgcaagact
tgcttgaataaacttcaccgaaaagcttgtccttttgaccagactgccatcaacacagac
attgatgtgcttcctgtcaacttcgcacttctccagttagttggagcccaggtaccagac
catcagtcaatcaagttaagtaatctaggtgagaacaaacactatgaagttgcaaagaaa
tgtgttgaagacttggcactctacttaaaaccactaagtggaggtaaaggtgtagctagt
ttgaaccagagtgcactgagccgtccaatgcagaggaaactggtgacacttgtaaattgt
caactggtagaggaagaaggtcgtgtaagagccatgcgagcagcccgttcacttggagaa
agaactgtaacggaactaatattacagcaccagaaccctcagcaattgtctgccaactta
tgggctgctgtcagggctcgaggatgccagtttctagggccagctatgcaagaagaggcc
ttgaaactggtgttgctggctttagaagatggttctgctctctcaagaaaagttctggta
ctttttgttgtgcaaagactagaaccaagatttcctcaggcatccaaaacaagtattggt
catgttgtgcaattactgtatcgagcttcttgttttaaggttaccaaaagggatgaagac
tcttctctgatgcagctaaaggaggaatttcggagttatgaggcattacgcagagagcat
gatgcccaaattgttcatattgctatggaagcaggactccgtatttcacctgagcagtgg
tcctcacttctatatggtgacttggcgcataaatcccacatgcaatctattattgataag
ctgcagtctccagaatcatttgcaaagagtgtccaggaattgaccattgttttgcaacga
acaggtgacccagctaacttaaatagactgaggcctcatttagagcttcttgcaaacata
gaccccaatccagatgctgtttcaccaacttgggagcagctagaaaatgcaatggtagct
gttaaaacagtggttcatggccttgtggacttcatacagaattatagtagaaaaggccat
gagacccctcagccccagccaaacagcaaatataaaactagcatgtgccgagatctaaga
cagcaaggagggtgtccacgaggaacaaattgtacttttgcccattctcaggaagagctt
gaaaagtatcgactaaggaacaaaaagatcaatgcaactgtaagaacatttcctcttcta
aataaagttggtgtaaacaacactgtcacaaccacagccggaaatgtcatttctgtcata
ggaagtactgaaacaacggggaaaattgttccaagtacaaatggaatttccaatgcagaa
aacagtgttgcccagctaatcccacgtaatgctgacagtgcattaagagctctggagact
gtgaagaaagtggggaaagttagcactaatggtcagaatgctgctgggccttcctcagag
tctgtaactgaaaataaaattggttctccacccaagactcctgtaagtaatgtagcggct
acctcagctgggccctctaatgctggaacagaactgaactctgtgcctccaaaatccagc
ccatttatcactagagtaccagtatatcctcagcattctgaaaacattcagtattttcca
gacccaaggactcagatatcctttgaagtcccacagtacccacaaacaggatactaccca
ccacctccaacggtaccagctggtgtggctccctgtgttcctcgctttgtgaggtccaac
aatgttccagagtcctccctcccacctgcttccatgccatatgccgatcattacagtaca
ttttcccctcgagagcgaatgaatactccttaccaacctcctcctccgcagccatatgga
ccagttcctccagtaccttctggaatgtatgctcctgtgtacgacagcaggcgcatctgg
cgcccacctatgtaccaacgagatgacattattagaagcaattctttacctccaatggat
gtgatgcactcgtctgtctatcagacctctttacgagaaagatataattccttagatggg
tattactcagtggcttgtcagcaaccaagtgaaccgaggacaactgtgcctttaccaagg
gaaccctgtggtcatttgaagaccagttgcgaggagccagtaagaagaaagccagaacag
tgggcacagtaccacactcagaaagcacctcttgtctcttcaactcttcctgtggcaaca
cagtcttcaacaccaccttctcctctattcagtgtagactttcgcactgatctctctgaa
agtgtgagtgggacaaaatttgaagaagatcatctttcccattattctccctggtcttgt
ggcaccataggctcctgtataaatgtcatcgattcagagcccagagatgtgattgctaat
tcaaatgctgtgttaatggacctagacagtggggatgttaagagaagagtacatttattt
gaaactcagagaaggacaaaagaagaagaccccataattccttttagtgatggacctatc
atctcaaaatggggtgcaatttccagatcttcccgtacaggttaccataccacggatcct
gtccaggccactgcttcccaaggaagtgcaactaagcccatcagcgtatcagattatgtc
ccttatgtcagtgctgttgattcaaggtggagttcttacggtaatgagtccacatcatca
gcccactatattgaacgggacagattcattgttactgatttatcttgtcatagaaagcat
tccagtactggagaccttttgagcattgaacttcagcaggccaagagcaactcattgctg
cttcagcgggaggccaatgctctggccatgcaacagaaatggagttccctggatgaaggc
cgccaccttaccttaaaccttctaagcaaggagattgaattgagaaatggagagagtgat
tatacagaagatgcaactgatactaagcctgatagggatattgagttagagctttcagca
cttgatactgatgaaccagatggacagagtgaacaaatggaagagatcctggacatacag
cttggtatcagttctcaaaatgatcagctgctgaatggaatggcagtggaaaatgggcat
ccagtgcagcagccccaaaaggagccactggagcagaagagacagagtttaggtgaagac
catgtgattctggaggagcaaaaaacaattctgccggtaacttcttgctttagccagcca
ctcccagtgtccattagcagtgcgagctgcctccccatcaccacatccgtcagcgttggc
gacctcattctgaaaactcatgttgtgtctgaagataaaaatgactttttaaaacctgtt
gttgcaaatgggaagatggttaacagctga
DBGET
integrated database retrieval system
